@ rdmpage
DESCRIPTION
@ rdmpage. @ vizbi. TreeView. PHYLIP. NJPLOT. MacClade. PAUP. Mature. Problem has been solved. Thank you. Any questions?. Trees suck…. …in ways that maps don’t. Maps are predictable. Navigation is predictable. Every pixel counts. Ground truth. Relative and absolute navigation. - PowerPoint PPT PresentationTRANSCRIPT
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@rdmpage @vizbi
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TreeView
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PHYLIP
MacClade PAUP
NJPLOT
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Mature
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Problem has been solved
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Thank you
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Any questions?
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Trees suck…
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…in ways that maps don’t
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Maps are predictable
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Navigation is predictable
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Every pixel counts
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Ground truth
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Relative and absolute navigation
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Latitude 42.363921Longitude -71.087763
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Phylogeny has none of this
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X
A
BC
D
Y
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X
B
AD
C
Y
We can reorder Y
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@broadinstitute
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X
B
AD
C
Y
X is a partial order
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X
B
AD
C
Y
X is a partial order
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X: evolutionary distance
B
AD
C
Y
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X: time
B
AD
C
Y
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Y
X
Z?
What would third dimension represent?
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Paloverde
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@wellcometrust
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Pretty, but…
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Is 3D useful?
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@systbiol
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Y: e
volu
tiona
ry d
ista
nce
X: species
Z: genes/copies
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Y: la
titud
e
X:longitude
Z: evolutionary distance
@DavKidd @andrewxhill
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@rdmpage
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@andrewxhill
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Touching the tree
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@dr_pi
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@kzelnio Think how great of a tool that could be at museumson a large flat screen at 4 year old height.
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Dendroscope
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Big trees
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11 June 2003
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“best viewed when enlarged to a 1.5-meter diameter”
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add
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@rdmpage
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@rdmpage
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1
3
2
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1
3
2
4
5
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What’s next…
Geophylogenies
Touch
Zoomable viewers
http://iphylo.blogspot.com