1/2/2014 (c) 2000, ron s. kenett, ph.d.1 statistics for molecular biology and bioinformatics...

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06/07/22 (c) 2000, Ron S. Kenett, Ph.D. 1 Statistics for Molecular Biology and Bioinfo Instructor: Ron S. Kenett Email: [email protected] Course Website: www.kpa.co.il/biostat Course textbook: MODERN INDUSTRIAL STATISTICS, Kenett and Zacks, Duxbury Press, 1998 The STEPS Case Studies The STEPS Case Studies

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Page 1: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

04/10/23

(c) 2000, Ron S. Kenett, Ph.D. 1

Statistics for Molecular Biology and Bioinformatics

Instructor: Ron S. KenettEmail: [email protected]

Course Website: www.kpa.co.il/biostatCourse textbook: MODERN INDUSTRIAL STATISTICS,

Kenett and Zacks, Duxbury Press, 1998

The STEPS Case StudiesThe STEPS Case StudiesThe STEPS Case StudiesThe STEPS Case Studies

Page 2: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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List of Case StudiesList of Case StudiesList of Case StudiesList of Case Studies

• Case 1: Using IgE Levels to diagnose diseases

• Case 2: Exploring Pharmaceutical Company Data

• Case 3: Screening Down’s Syndrome

• Case 4: Studying the effect of pollution on Lichen

Page 3: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Instructions:Instructions:1. Create temporary directory1. Create temporary directory2. Download STEPS base from 2. Download STEPS base from www.kpa.co.il/biostatwww.kpa.co.il/biostat3. Open file by double clicking on it3. Open file by double clicking on it4. Install STEPS by clicking on Setup4. Install STEPS by clicking on Setup5. Clean up temporary directory5. Clean up temporary directory6. Download case study from 6. Download case study from www.kpa.co.il/biostatwww.kpa.co.il/biostat7. Repeat steps 3-57. Repeat steps 3-5

Instructions:Instructions:1. Create temporary directory1. Create temporary directory2. Download STEPS base from 2. Download STEPS base from www.kpa.co.il/biostatwww.kpa.co.il/biostat3. Open file by double clicking on it3. Open file by double clicking on it4. Install STEPS by clicking on Setup4. Install STEPS by clicking on Setup5. Clean up temporary directory5. Clean up temporary directory6. Download case study from 6. Download case study from www.kpa.co.il/biostatwww.kpa.co.il/biostat7. Repeat steps 3-57. Repeat steps 3-5

• STEPS base: STEPS_base.exe• Case 1: STEPS_Ige.exe• Case 2: STEPS_eda1.exe, STEPS_eda2.exe• Case 3: STEPS_medscrn.exe• Case 4: STEPS_lichen.exe

• STEPS base: STEPS_base.exe• Case 1: STEPS_Ige.exe• Case 2: STEPS_eda1.exe, STEPS_eda2.exe• Case 3: STEPS_medscrn.exe• Case 4: STEPS_lichen.exe

Page 6: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Additional case studies:

STEPS_gulls.exeSTEPS_sterile.exeSTEPS_rats.exeSTEPS_genes.exeSTEPS_sft.exeSTEPS_spatial.exe

Additional case studies:

STEPS_gulls.exeSTEPS_sterile.exeSTEPS_rats.exeSTEPS_genes.exeSTEPS_sft.exeSTEPS_spatial.exe

More information on: http://www.stats.gla.ac.uk/steps/windows.html

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Case 1: Using IgE Levels to diagnose diseases

Page 8: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Case 1: Using IgE Levels to diagnose diseases

Page 9: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Case 1: Using IgE Levels to diagnose diseases

Page 10: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Case 1: Using IgE Levels to diagnose diseases

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Case 1: Using IgE Levels to diagnose diseases

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Case 1: Using IgE Levels to diagnose diseases

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Case 1: Using IgE Levels to diagnose diseases

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Case 2: Exploring Pharmaceutical Company Data

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Case 2: Exploring Pharmaceutical Company Data

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Case 2: Exploring Pharmaceutical Company Data

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Case 2: Exploring Pharmaceutical Company Data

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Case 2: Exploring Pharmaceutical Company Data

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

Page 22: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Case 3: Screening Down’s Syndrome

Page 23: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

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Case 3: Screening Down’s Syndrome

Page 38: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Case 4: Studying the effect of pollution on Lichen

Page 39: 1/2/2014 (c) 2000, Ron S. Kenett, Ph.D.1 Statistics for Molecular Biology and Bioinformatics Instructor: Ron S. Kenett Email: ron@kpa.co.ilron@kpa.co.il

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen

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Case 4: Studying the effect of pollution on Lichen