161129 tryggve-at niasc-biobanks
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NEIC TRYGGVE – NORDIC SERVICES FOR SENSITIVE DATA
Antti Pursula, [email protected] https://wiki.neic.no/tryggve
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USE OF HUMAN DATA IN BIOMEDICAL RESEARCH HAS GREAT POTENTIAL
PERSONALIZED MEDICINE
CURE OF DISEASES
IMPROVED LIFE QUALITY
Data is collected by: Biobanks Research institutes Large genome studies Register organizations, Hospitals, Personal health apps, etc.
Society benefits when these data collections are made available for research!
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PROTECT PRIVACY OF THE INDIVIDUAL
Research use of health data requires: Data protection Secure data transfer Secure analysis environments Ethical considerations Effective legislation
CHALLENGE IS TO PREVENT NON-AUTHORIZED USE OF DATA WHILE UTILIZING THE DATA FOR THE BENEFIT OF SOCIETY AND INDIVIDUALS
Health and well-being data on humans is sensitive, personal data that needs to be protected, even after de-identification
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NEED FOR SECURE IT SERVICESTHAT CAN IMPLEMENT THE NECESSARY PRECONDITIONS
ELIXIR Nodes in Finland, Denmark, Norway and Sweden have teamed up to develop and scale up services for sensitive research data, within the NORDIC TRYGGVE PROJECT
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TRYGGVE PROJECT COLLABORATION FOR SENSITIVE BIOMEDICAL DATA
Project aims to strengthen biomedical research by facilitating use of sensitive data in cross-border projects
Partners and funders are NeIC and ELIXIR Nodes in Denmark, Finland, Norway and Sweden
3-year project with volume of ca. 100 PMs /year (ends in Oct 2017)
Project will build on strong existing capacities and resources in Nordic countries
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PRAGMATIC APPROACHImplement solutions that support various use cases and varying local terms and conditions
MOBILITYEnhancing cross-border mobility of: data, users and analysis pipelines
ACCESSIBLEServices for sensitive data should be accessible to users across Nordics regardless of their location
TRYGGVE TARGETS IN A NUTSHELL
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SECURE COMPUTING AND DATA ENVIRONMENTS
Tryggve service development relies on secure computing and data environments at ELIXIR Nodes at the participating countries
TSD 2.0 service at USIT
Mosler service at NBIS
ePouta secure cloud at CSC
Computerome at DTU
SECURE CLOUD Infrastructure for data and computing (ePouta, Computerome)
SECURE REMOTE DESKTOPbacked up with computing resources (TSD, Mosler, Computerome)
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SECURE SYSTEMS IN TRYGGVE
Secure systems available through Nordic Tryggve project:• TSD 2.0 service at USIT, Norway
– PaaS, accessible through remote desktop• Mosler service at BILS, Sweden
– PaaS, accessible through remote desktop• ePouta IaaS at CSC, Finland
– IaaS, secure cloud infrastructure connected securely to customer’s system• Computerome at DTU, Denmark
– Iaas / PaaS, both access through remote desktop and connected to customer’s system
• All provide secured area for research projects, isolated both from external networks and from other users of the systems
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SECURE SYSTEMS THE USER STAYS IN CONTROL
TAKING INTO USE EXTERNAL SECURE SERVICE DOES NOT IMPLYTRANSFERRING THE CONTROL OVER THE DATA TO THE PROVIDER!
Where the data is analyzed or stored and who has the control over the data are different thingsService providers offer secure environment for storing and analyzing their data
Data handler contracts define the roles
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Ability to combine data from several sources and countries
MOBILITY OF DATA
MOBILITY OF USERS
Ability to use the service best suited for the research project, regardless if it is in the same country
Ability to deploy the preferred analysis pipeline on the system being used
Access the same system and data that collaborators in another country use
MOBILITY OF ANALYSIS PIPELINES
Pool data from several countries to achieve larger sample sizes
Data in several locations but can not be pooled; run standardized analyses on all partial data sets
POSSIBLE USE CASES:
MOBILITY ACROSS BORDERS
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• Mosler remote desktop connected to CSC ePouta secure cloud infrastructure:– No degradation of performance when moving data
between countries
DEMONSTRATION OF THE USE OF SECURE CLOUD ACROSS BORDERS
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GETTING STARTED USING THE TRYGGVE SERVICES
Aimed for Nordic research teams
Backed by ELIXIR Nodes and NeIC
CURRENTLY ACTIVE USE CASES
Use of the systems not limited To Nordic countries!
CALL FOR NEW USE CASES
CONTACT INFORMATION TO SERVICES ON THE TRYGGVE WEB SITE https://wiki.neic.no/wiki/Tryggve_Getting_Started
Trans-Nordic Gene-Environment Analyses in Schizophrenia
Scandinavian Genetics Collaboration for Olink Biomarkers
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CASE EXAMPLE ON TRYGGVE SUPPORT FOR A USE CASE
PROCESSING SENSITIVE DATA FORSCHIZOPHRENIA RESEARCH
More info and interview of Prof. Sullivan athttp://www.inthefieldstories.net/processing-sensitive-data-for-schizophrenia-research/
Research on the gene-environmental interaction and causes for schizophrenia, led by professor Patrick Sullivan, KI.
Large amount of samples are available in the Nordic countries.
Secure place to conduct harmonized analyses is crucial.
Professor Sullivan, with the assistance of Tryggve security experts, is now combining data sets from Denmark, Norway, Sweden and Estonia to create a joint data set with a total of 6000 cases and 8750 controls.
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FUTURE VISIONSFOR A COLLABORATIVE EFFORT
Create Data Platforms that are internationally interoperable
Support data submission, archiving and sharing processes
Integrate with secure cloud services for data processing
Enable sharing of data to third parties who have the appropriate access permissions
Creating such data platforms is a collaborative effort between (at least) the research community, IT infrastructure providers and data collecting organizations
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aINFORMATION COMMONSAND THE DEVELOPMENTS IN TRYGGVE / CSC
Information commons slide by Joakim Dillner, NIASC
CSC REMS access management
“Local EGA” Secure repository
Secure Gateway module
CSC ePouta secure cloud infrastructure
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AUTHORIZATION MANAGEMENT WITH REMS
• REMS provides complete process for managing entitlements • Demo available at https://remsdemo.csc.fi/
Principalinvestigator
Applicant
Research groupMembers of the
application
Metadata on dataset 1&2
Dataset 1
Dataset 2
DAC 1Approver
DAC 2Approver
REMS
Workflow
Reports
Entitlements
IdP
IdP
IdP
SP
1. Apply for access
4. Approve
5. Access
3. Circulate to approver
2. Commit to licence terms
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SUMMARYTRYGGVE PROVIDES SECURE SERVICES ACROSS BORDERS
A Secure private cloud is an infrastructure operated solely to provide an
on demand specific use case service transparent to the end user
Nordic ELIXIR Nodes collaborate to create a region where all the secure services are accessible to users regardless of their location
Pragmatic: mobility of data, mobility of users, mobility of pipelines
Based on secure data and computing environments in each participating country
Cross-border use cases are in operation
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CONTACT INFO
Project Manager:Antti [email protected]
Website:https://wiki.neic.no/Tryggve
Local contact points:Denmark: Ali Syed (DTU) [email protected]: Antti Pursula (CSC) [email protected]: Francesca Iozzi (UiO) [email protected]: Niclas Jareborg (NBIS) [email protected]