3.1 metabolism and energy - ms. ho-lau's classroom · energy dynamics of atp the hydrolysis of...
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3.1 Metabolism and Energy
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Metabolism
All of the chemical reactions in a cell
To transform matter and energy
Step-by-step sequences metabolic pathways
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Anabolic reactions
Build large molecules
Catabolic reactions
Break large molecules into smaller products
Metabolic Pathways
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Energy
All organisms continuously capture, store and use energy
Cellular respiration releases energy from carbohydrates and other energy-rich molecules
Functions:
Survive
Grow
Reproduce
Carry out daily activities
Hummingbird heart rate:
Over 1000 beats per min
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Energy
Capacity to do work
1. Kinetic energy:
Energy of motion
2. Potential energy:
Stored energy
Can transform from one form to another
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Bond Energy
Measure the stability of a covalent bond
Forming bonds – energy is released
Breaking bonds – energy is used
Energy needed to break a bond is the same amount as the energy released when the bond was formed
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Energy used Energy released
Net Energy released
Free atoms
have more
chemical
(potential)
energy than
any compound
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Example: Cellular Respiration
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Enthalpy Change (∆H)
change in the total energy of a system
difference in the energy needed to break the bonds
and the energy released when new bonds are form
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Potential Energy Diagram
Endothermic Reaction
∆H is positive
Energy is absorbed
Exothermic Reaction
∆H is negative
Energy is released
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Thermodynamics
Study of energy changes in a system
A system:
Can be a whole organism or a set of reactants and products
Biological systems are open systems (can exchange matter and energy with the surroundings)
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First Law of Thermodynamics
Total amount of energy in the university is constant
Energy cannot be created or destroyed
Energy can be transformed from one types into another and transferred from one object to another
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Example: Cellular Respiration
∆H is negative
Energy is released
Photosynthesis
Reversed reaction
Energy is absorbed
Transition State
Reactants
Products
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Entropy
A measure of disorder
Continuously increases as energy available to do work is progressively transformed into unusable heat (ie. energy available is decreasing)
In chemical reactions, entropy increases when:
1. Solid reactants become liquids
2. Liquid reactants become gaseous
3. Complex molecules react to form simpler molecules
4. Solutes move with their concentration gradients
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Second Law of Thermodynamics
During any process, the universe tends towards disorder
Only applies to closed system
Living organisms remain organized because they use inputs of matter and energy to reduce entropy and thus stay alive
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Gibb’s Free Energy (G)
Energy available to do work in any system
(to break bonds and then form bonds)
G = H – TS
In biological reactions,
constant temperature, pressure and volume:
ΔG = ΔH – TΔS
(used to predict whether a chemical reaction is spontaneous or not)
G: Free energy
H: enthalpy
T: temperature
S: entropy
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Exergonic Reaction
∆H<0 and ∆ S>0
→ ∆ G<0
→ spontaneous reaction
* Free energy is released in the form of heat
∆H>0 and ∆ S<0
→ ∆ G>0
→ not spontaneous reaction
* Energy must be supplied
Endogonic Reaction
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Activation Energy
Most spontaneous reactions still require an initial input of energy
Biological catalyst (enzyme) reduces the amount of activation energy
Activation
energy
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Thermodynamics and Metabolism
When a molecule is broken down (catabolic reaction):
Energy is released (∆H <0)
Entropy increases (∆ S >0)
Exergonic (spontaneous) reaction
When a molecule is built (anabolic reaction):
Endergonic (non-spontaneous) reaction
Coupled with catabolic reactions to get power
Through the energy molecule: ATP (adenosine triphosphate)
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Thermodynamics and Metabolism
Catabolic reactions release energy
Energy captured in ATP
ATP used to power anabolic and endergonic reactions
Bonds between the negative
phosphate groups contain a
large amount of energy
Hydrolysis breaks these bonds
and releases the stored energy
to do work in the cell
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Energy Dynamics of
ATP
The hydrolysis of ATP to ADP and Pi is
a highly exergonic reaction.
Repulsion between negative charges
on the neighbouring phosphate
groups makes the bonds between the
first and second and between the
second and third phosphate groups
unstable.
When these bonds are broken,
energy is released.
inorganic
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Coupled Reactions
Use of ATP as a cycle
Most cells only have a few seconds’ supply of ATP at any given moment
Continuously produced