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1 1 PHA productivity and yield of Ralstonia eutropha when intermittently or continuously fed a 2 mixture of short chain fatty acids. 3 4 Panchali Chakraborty 5 1199 Edison Drive 6 Cincinnati, OH-45216 7 Phone: 859-402-5258 (C), 513-948-5015 (O) 8 Email: [email protected] 9 William R. Gibbons 10 Department of Biology and Microbiology 11 South Dakota State University, Brookings, SD-57006 12 Phone: 605-688-5499, Fax: 605-688-6675 13 E-mail: [email protected] 14 Kasiviswanathan Muthukumarappan 1 15 Department of Agriculture and Biosystems Engineering 16 SAE 225/ Box 2120, South Dakota State University, Brookings, SD-57006 17 Phone: 605-688-5661, Fax: 605-688-6764 18 E- mail: [email protected] 19 20 1 Corresponding author: Department of Agriculture and Biosystems Engineering SAE 225/Box2120, South Dakota State University, Brookings, SD-57006 Phone : 605-688-5661, Fax: 605-688-6764

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Page 1: 506153.v2

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1

PHA productivity and yield of Ralstonia eutropha when intermittently or continuously fed a 2

mixture of short chain fatty acids. 3

4

Panchali Chakraborty 5

1199 Edison Drive 6

Cincinnati, OH-45216 7

Phone: 859-402-5258 (C), 513-948-5015 (O) 8

Email: [email protected] 9

William R. Gibbons 10

Department of Biology and Microbiology 11

South Dakota State University, Brookings, SD-57006 12

Phone: 605-688-5499, Fax: 605-688-6675 13

E-mail: [email protected] 14

Kasiviswanathan Muthukumarappan1 15

Department of Agriculture and Biosystems Engineering 16

SAE 225/ Box 2120, South Dakota State University, Brookings, SD-57006 17

Phone: 605-688-5661, Fax: 605-688-6764 18

E-mail: [email protected] 19

20

1 Corresponding author: Department of Agricu lture and Biosystems Engineering

SAE 225/Box2120, South Dakota State University, Brookings, SD-57006

Phone : 605-688-5661, Fax: 605-688-6764

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ABSTRACT 21

The research described in this present study was part of a larger effort focused on 22

developing a dual substrate, dual fermentation process to produce Polyhydroxyalkanoate 23

(PHA). In the first bioreactor Ralstonia eutropha (R. eutropha) was rapidly grown to a high 24

cell density on a low cost medium. The substrate evaluated in this study for the growth phase 25

of R. eutropha was condensed corn solubles (CCS), a low-value byproduct of the dry-mill, 26

corn ethanol industry. In the second bioreactor a mixed culture of rumen microbes would 27

metabolize another feedstock (lignocellulosic biomass or other low cost byproduct) into a 28

mixture of Short Chain Fatty acids (SCFAs), called the Artificial Rumen Fluid (ARF). This 29

ARF would subsequently be fed to the R. eutropha cell mass to drive PHA production. The 30

focus of this study was developing and optimizing a strategy for feeding a mixture of SCFAs 31

(simulated ARF) and maximizing PHA production in a cost-effective way. SCFAThree 32

different feeding strategies were examined in this study. The culture was grown to high cell 33

densities in nitrogen supplemented CCS media in 5 L bioreactors. After 48 h of incubation at 34

30ºC, ARF was added to the bioreactors using the following schemes : 1) 124 ml at 48, 72, 35

and 96 h, 2) 20 ml every 3 h from 48-109 h. and 3) 7.75 ml h-1 from 48-96 h continuously. 36

ARF was not inhibitory to the growth of the organism since the organism continued to grow 37

after its addition. The overall growth rate of R. eutropha was 0.2 h-1. The second ARF feeding 38

strategy gave the best results in terms of PHA production. PHA productivity (0.0697 g L-1 h-39

1), PHA concentration (8.37 g L-1) and PHA content (39.52%) were the highest when ARF 40

was fed every 3h for 61h. This study proved that CCS, can be potentially used as a growth 41

medium to boost PHA production by R. eutropha thus reducing the overall cost of biopolymer 42

production. 43

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Key words: Artificial Rumen Fluid, Bioreactor, Condensed Corn Solubles, 44

Polyhydroxyalkanoate, Ralstonia eutropha, Short chain fatty acids. 45

INTRODUCTION 46

Biodegradable polymers made from renewable resources such as agricultural wastes, corn, 47

cassava, tapioca, whey, etc., do not lead to depletion of finite resources. The most studied of 48

the biodegradable polymers include polyesters, polylactides, aliphatic polyesters, 49

polysaccharides, and various copolymers [3]. These biopolymers have many of the desirable 50

physical and chemical properties of conventional synthetic polymers [1]. To this point, high 51

production costs have limited the use of biopolymers. However if these costs can be reduced, 52

there would be widespread economic interest [21]. 53

The focus of this project was production of the biopolymer 54

Polyhydroxyalkanoate (PHA) at a low cost. PHA is actually a term used to describe a diverse 55

family of polymers that are composed of 3-hydroxy fatty acid monomers. The carboxyl group 56

of one monomer forms an ester bond with hydroxyl group of the neighboring monomer. 57

Polyhydroxybutyrate (PHB) has been studied in most detail. PHB has good oxygen 58

impermeability, moisture resistance, water insolubility, and optical purity [10, 17]. Young's 59

modulus and tensile strength of PHB are similar to polypropylene, but elongation at break is 6 60

% as opposed to that of 400 % for polypropylene [22]. It has good UV resistance, but poor 61

resistance to acids and bases [9]. The oxygen permeability is very low, making PHB a suitable 62

material for use in packaging oxygen-sensitive products. PHB has low water vapor 63

permeability compared to other bio-based polymers but higher than most standard polyolefins 64

and synthetic polyesters [8, 17]. Since PHB is toxicologically safe, it can be used for articles 65

which come into contact with skin, feed or food [6]. 66

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In the food industry, PHA has a wide application as edible packaging material, coating 67

agent, flavor delivery agent and as dairy cream substitute [34, 35]. It can also be used for 68

making bottles, cosmetics, containers, pens, golf tees, films, adhesives and non-woven 69

fabrics, toner and developer compositions, ion- conducting polymers and as latex for paper 70

coating applications [24, 30]. It can be used to make laminates with other polymers such as 71

polyvinyl alcohol. The degradation products of PHB are found in large concentrations in 72

human blood plasma, so is not toxic for human use [15]. 73

PHA production by Ralstonia eutropha (R. eutropha) generally occurs during 74

stationary phase. Hence cells are first grown to high density, after which a key nutrient is 75

limited to trigger PHA synthesis [15]. Because of this dual phase process, PHA production 76

lends itself to fed-batch, as well as, continuous operation. This follows Pontryagin’s 77

maximum principle, which is an optimal feeding strategy for fed-batch fermentation [29]. The 78

key to this principle is determining the optimum switching time (tc). The maximum growth 79

rate (μmax) should be initially maintained, then switched to the critical growth rate (μc) at tc to 80

maximize the specific product production rate (ρmax). Since growth rate is affected by Carbon 81

: Nitrogen (C:N) ratio, it should also be changed at tc. 82

A variety of carbon sources have been used for production of PHA using different 83

fermentation strategies. Carbohydrates, oils, alcohols, fatty acids, and hydrocarbons are 84

potential carbon sources for PHA production. Ethanol byproducts, cane and beet molasses, 85

cheese whey, plant oils, hyrolysates of corn, cellulose, hemicellulose, palm oil, soybean oil, 86

tallow, corn steep liquor, casamino acids, and food scraps had been used as substrates to 87

produce PHA using different organisms [7, 12, 13, 18, 20, and 31]. 88

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The substrate evaluated in this study for the growth phase of R. eutropha was 89

Condensed Corn Solubles (CCS), which is a low-value byproduct of the dry-mill, corn 90

ethanol industry. In the dry mill process, the whole corn is milled, mixed with water, and 91

enzymatically hydrolyzed to convert starch to glucose, which is converted to ethanol by 92

fermentation. After distillation to remove ethanol, the larger corn particles are recovered by 93

centrifugation as distiller's wet grains. The supernatant is condensed in multiple-effect 94

evaporators to give condensed corn solubles [11]. 95

The composition of CCS is shown in Table1. Corn-milling byproducts are typically 96

marketed as animal feed because of their protein content. However these byproducts may also 97

contain residual carbohydrates, which might be utilized by microbial fermentation to produce 98

industrial biopolymers. CCS is an excellent source of vitamins and minerals, including 99

phosphorous and potassium. 100

The objective of this study was to determine the effects of adding Artificial Rumen Fluid 101

(ARF) on cell viability, growth as well as PHA production to a 48 h culture of R. eutropha. 102

Different strategies of feeding simulated ARF into the bioreactors were assessed to maximize 103

PHA production. 104

MATERIALS AND METHODS 105

Culture, Maintenance and Inoculum Propagation 106

The ATCC 17699 type strain of R. eutropha was used. The culture was routinely 107

transferred to nutrient broth and incubated on a reciprocating shaker (250 rpm) at 30ºC for 24 108

h. For short term maintenance the culture was stored on Tryptic Soy Agar (TSA) slants 109

covered with mineral oil and stored in the refrigerator. Inoculum for all trials was prepared in 110

a stepwise manner, by transferring the culture from TSA plates into 100 ml of the CCS 111

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medium (described below), then incubating for 24 h on a rotary shaker (250 rpm) at 30°C. 112

The inoculum rate for all bioreactor trials was 1 % (v v-1) from a 24 h grown culture to an 113

average OD of 1.04. 114

Medium 115

A low-cost medium based on CCS was developed in a prior study [4]. This medium, 116

containing 240 g CCS L-1, with a C:N ratio of 50:1 was the best medium for the growth of R. 117

eutropha. The medium was prepared by mixing 1,370 ml CCS with 4,630 ml deionized water, 118

adjusting the pH to 6.5 using 10 M sodium hydroxide (NaOH), then centrifuging at 11,000 119

rpm for 7 min at 15-25ºC. The supernatant was then filtered through Whatman filter paper 120

#113 and autoclaved. A filter sterilized 178 g L-1 ammonium bicarbonate (NH4HCO3) stock 121

solution was prepared and then 20.4 ml of this solution was added to each liter of CCS 122

medium to adjust the C:N ratio to 50:1. The pH was further adjusted to 7.0 by adding 10 N 123

sulfuric acid (H2SO4) before inoculation. 124

Fermentation Conditions for Cultivation of R eutropha in Bioreactor 125

Experimental trials were conducted in 5 L New Brunswick, Bioflo III, Edison, NJ 126

bioreactor that contained 4 L of CCS medium. Filter sterilized air (1 L L -1 min-1) was sparged 127

into the bioreactor, and 2-3 ml of antifoam (Cognis Clerol FBA 5059, Cognis, Cincinnati, 128

OH) were added to the medium before inoculation. Fermentation medium was incubated at 129

30°C and 500 rpm for 48 h, since prior research had shown R. eutropha to reach its maximum 130

population by this time/temperature combination [4]. 131

At 48 h we began feeding the fermenter a mixed Short Chain fatty Acid (SCFA) 132

solution, using any of the three different strategies. This SCFA solution, referred to as ARF, 133

contained 10 parts acetic, 2 parts butyric, 15 parts lactic, and 20 parts propionic acids (v v-1). 134

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The composition of ARF was based on a separate study evaluating fermentation of biomass 135

with rumen consortia. A total volume of 372 ml of ARF was fed to the culture over a period 136

of 48 h. In the first feeding strategy (24h feeding), 124 ml of ARF was added at 48, 72, and 96 137

h. In the second feeding strategy (3h feeding), 20 ml ARF was added at 48 h and then every 3 138

h until 109 h. In the third feeding strategy (continuous feeding), ARF was continuously added 139

from 48 to 96 h at a rate of 7.75 ml h-1. All incubations were continued until 144 h. Two 140

replications were performed for each feeding strategy to determine the effect of mixed fatty 141

acids on cell viability, acid utilization, and PHA production. 142

Analytical Methods 143

Viable Counts, Cell Dry Weights, pH, HPLC and Ammonium/Phosphate Analysis 144

Samples were collected every 12h and viable cell counts were done with TSA. At 72, 145

96, and 144 h, 50 ml samples were collected to determine cell dry weights. Samples were 146

centrifuged and the precipitate was dried in the hot air oven at 80°C for 2 days. pH was 147

measured using an Acumet 950 pH meter (Thermo Fisher Scientific of Waltham, MA). 148

Samples were also analyzed via a Waters HPLC system (Milford, MA) for sugars, organic 149

acids and glycerol. These samples were first filtered through a non-sterile 0.2 μm filter to 150

remove solids, and then frozen until analysis. An Aminex HPX 87H column (Bio-Rad 151

Laboratories, Hercules, CA), operated at 65ºC with a helium-degassed, 4 mM H2SO4 mobile 152

phase at a flow rate of 0.6 ml min-1 was used. Peaks were detected using a refractive index 153

detector. Standard solutions of maltose, glucose, lactic acid, butyric acid, acetic acid, 154

propionic acid, succinic acid, and glycerol (at 3 and 30 g L-1) were used to calibrate the 155

integrator. Samples collected at 0, 72, and 120 h were also tested for ammonia and phosphate 156

using Hach Ammonium and Phosphate Unicell tests (Hach Company, Loveland, Colorado). 157

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PHA Analysis 158

To measure PHA, 50 ml samples of broth were collected at 72, 96, and 144 h and 159

centrifuged. The pellets were then lyophilized and ground using a mortar and pestle. The 160

method developed by Braunegg et al. [2] was used to simultaneously extract and derivatize 161

PHA to the 3-hydroxyalkanoate methyl esters of the monomers. In this method, 20-30 mg of 162

ground cells were digested by adding 5 ml of digest solution and incubating at 90-100ºC for 4 163

h. The digest solution contained 50% chloroform, 42.5% methanol, 7.5% H2SO4 (v v-1). 164

After cooling, sample was washed with 2 ml of water, and the bottom layer (containing the 165

chloroform and methyl esters of PHA) was collected and placed in a Gas Chromatography 166

(GC) vial with anhydrous sodium sulfate (to remove residual water). Vials were frozen until 167

analysis. 168

PHA was quantified using a Hewlett-Packard 5890 Series II (Palo Alto, CA) GC with 169

a flame ionization detector (GC-FID) [2, 5]. Split injection was used onto a Supelco SSP-170

2380 (Park Bellefonte, PA) capillary column (30 m x 0.25 mm I.D. with 0.20 um film). The 171

inlet head pressure was maintained at 28 psi and the temperature program started at 50°C for 172

4 min, then increased by 3ºC min-1 to a final temperature of 146°C for 4 min. The injector 173

and detector temperatures were 230ºC and 240ºC, respectively. Purified poly (3-174

hydroxybutyric acid co-3-hydroxyvaleric acid) (P(HB-HV)) obtained from Sigma-Aldrich 175

was used for a standard calibration. The co-polymer consisted of 88 % 3-hydroxybutyric acid 176

(3-HB) and 12 % 3-hydroxyvaleric acid (3-HV). Co-polymer concentrations of 2-10 mg ml-1 177

were digested as above, and then analyzed by GC-FID. Retention times were 14.9 min for 178

methylated 3-HB, and 17.8 min for methylated 3-HV. 179

180

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Statistical Analysis 181

All trials were performed in duplicates. Various fermentation parameters (maximum 182

cell populations, SCFA utilization rates, PHA productivity, etc) were analyzed to determine 183

least significant differences between treatments using randomized complete block design. 184

Fermentation Efficiency (FE) was calculated as the percentage of substrate supplied to that 185

was consumed. PHA productivity was calculated as the concentration of PHA produced per 186

hour whereas PHA content was determined as a percentage of PHA concentration over cell 187

dry weight. Data were analyzed using the PROC GLM procedure of SAS software to 188

determine F values and Least squares (LS) means. Exponential regression equations were 189

used to determine growth rates and acid utilization rates for each replication, from which 190

means were calculated. They were statistically analyzed by ANCOVA to test homogeneity of 191

slopes. Statistical data were analyzed at the significant level of p<0.05. 192

RESULTS 193

In all bioreactor trials the organism was incubated under similar conditions (30 º C, 194

500 rpm and aeration at 1L L-1 min-1) for the first 48 h, and this data was relatively uniform. 195

Figure 1 and Table 2 show the average cell population, growth rate, acid utilization, and 196

ammonia and phosphate uptake rates during this growth period. 197

Compared to shake flasks trials (Table 3), the maximum cell population in bioreactor 198

trials was almost 10 fold higher (2.3 X 1010 cfu ml-1). Likewise, the growth rate of R. 199

eutropha was also higher in the bioreactor (0.20 h-1) compared to the aerated shake flasks 200

(0.13 h-1). In the shake flask trials, lactic acid was consumed at the fastest rate followed by 201

acetic, butyric, succinic, and propionic acids. In the bioreactors, the organic acid utilization 202

rates in the growth phase were generally similar to shake flask trials except for lactic acid. It 203

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was consumed slower than acetic acid. Overall acid utilization rates were higher in the 204

bioreactors than in shake flasks probably due to the higher cell population. Percentage acid 205

consumptions were also higher in the bioreactor with the exception of lactic acid. Ammonia 206

and phosphate usage rates were higher in bioreactor trials again due to the higher cell 207

population. 208

Three ARF feeding strategies were compared in this study. Figures 2-4 shows that 209

ARF feeding resulted in a slight increase in cell populations. The effects of different feeding 210

strategies on maximum cell population, and ammonia and phosphate utilization rates are 211

shown in Table 4. The maximum cell populations were not significantly different between the 212

three treatments. In all cases the cell population continued to rise after ARF additions began, 213

suggesting that the acid levels were not inhibitory. The rates of ammonia utilization and 214

phosphate utilization were similar for all feeding strategies. 215

As expected, the 24 h addition method (Figure 2) resulted in the highest spikes in 216

SCFA concentration, with acid levels then falling as R. eutropha metabolized the acids to 217

PHA. There was no apparent accumulation of lactic, butyric, or succinic acids for the 24h 218

feeding strategy. However, acetic acid (2.3 g L-1), and to a lesser extent propionic acid (0.5g 219

L-1), had accumulated over time. All the SCFAs were completely utilized by 144 h for the 3h 220

feeding strategy. For the continuous feeding strategy all the SCFAs were consumed by 144h 221

with the exception of propionic acid (0.5g L-1). 222

Utilization rates of the individual SCFAs during the final 96 h of fermentation (48 223

to144 h), along with the combined acid utilization rates, are shown in Table 4. The combined 224

utilization rate also included consumption of succinic acid that was already present in the 225

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CCS medium. The highest combined acid utilization rates were observed in the 3 h and 226

continuous feeding strategies, with the lowest rate in the 24 h feeding method. 227

The trend of higher acid utilization rates with the 3 h and continuous feeding methods 228

was also evident for the individual acids. However the difference was only significant for 229

acetic acid. Propionic and lactic acids were used most rapidly followed by acetic and butyric 230

acid. 231

Table 4 also shows the FEs of the four SCFAs, along with the combined FE. The 3 h 232

and continuous feeding strategies resulted in the highest combined FE, while the lowest 233

occurred with the 24 h feeding method. This is consistent with the lower acid utilization rates 234

observed with the 24 h feeding strategy. 235

In comparing the individual acids, lactic acid was consumed completely, with greater 236

than 95 % utilization of propionic and butyric acids. FEs were higher for all the acids in the 237

bioreactor trials compared to the prior shake flask trials (Table 5). 238

Cell dry weights and PHA production parameters for the different ARF feeding 239

strategies are provided in Table 4. The 3 h feeding strategy resulted in the highest cell dry 240

weight, PHA concentration, and PHA content, but the values were not significantly different 241

from the other feeding strategies. Only the PHA productivity for the 3h feeding strategy was 242

significantly higher. Cell dry weight and PHA production were much higher than that 243

obtained during the shake flask trials. The highest PHA concentration in the cells in the shake 244

flask trials was 4.6 g L-1 (Table 5), whereas in the fermenter trials the PHA concentration of 245

the cells was about 1.82 times higher [4]. 246

247

248

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DISCUSSION 249

Typically, PHA production occurs during stationary phase. Hence cells are first grown 250

through exponential phase in a balanced medium to maximize growth rate. This medium is 251

formulated to run out of a key nutrient when the maximum cell population is achieved, then 252

additional carbon is added by fed-batch or continuous mode to maximize PHA production 253

[19]. 254

In this study nitrogen deficiency was used to trigger PHA production in the presence of 255

excess carbon. Nitrogen supplemented CCS medium resulted in better growth of R. eutropha 256

in the bioreactors as compared to the shake flasks due to the improved aeration and agitation 257

provided in the bioreactor, along with more consistent pH control. The organism continued to 258

grow after the SCFAs were added at 48h. This growth was supported by the residual ammonia 259

and phosphorus present in the medium. The organism reached its stationary phase by 96 h 260

when most of the ammonia and phosphorous present in the medium were consumed. Ideally, 261

one or both of these nutrients becomes limiting at the end of exponential phase, to trigger the 262

shift from reproductive metabolism to PHA synthesis [19]. Because nitrogen and phosphate 263

were not depleted until 72 h, this could have contributed to the continued increase in cell 264

numbers observed after 48 h. It is likely that at least some of the SCFAs fed at 48 h were 265

utilized for growth, until the point at which nitrogen became limiting. Researchers have found 266

that the complete lack of nitrogen may suppress enzyme activity in PHA synthesis [28]. Thus 267

a small amount of ammonia in the media might be necessary to trigger PHA synthesis. 268

The utilization rate of lactic acid in the initial 48h was lower than that of acetic acid 269

probably due to higher concentration of lactic acid (1.6 g L-1) in the bioreactor media 270

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compared to the shake flask media (1g L-1). This variation was due to the different batches of 271

CCS obtained from the ethanol plant. 272

In this study, fed batch (24h feeding) and continuous feeding strategies were chosen to 273

determine their effect on PHA production. The lowest acid utilization rates and FEs were 274

observed for the 24 h feeding strategy due to the periodic spikes in SCFA concentrations that 275

might have disrupted the acid utilization and decreased cell activity. At high SCFA 276

concentration the pH of the medium can reach below the pKas for SCFAs (lactic 3.86, acetic 277

4.76, butyric 4.83, propionic 4.87). At low pHs the undissociated form predominates, and the 278

SCFAs readily cross the cell membrane. Once inside they rapidly dissociate and acidify the 279

cytoplasm [25]. As a result, the proton gradient cannot be maintained as desired, and energy 280

generation and transport system dependent on proton gradient are disrupted [14]. This can 281

also cause an increase in osmotic pressure due to the accumulation of anions [23]. At pH 282

levels closer to the optimum for R eutropha (~7.0), SCFAs would be in the dissociated form 283

in the medium. While the anions wouldn’t be transported as readily, once inside the cell they 284

would not cause the adverse effects of the undissociated form. Therefore, SCFAs can only be 285

effective carbon sources when pH and SCFA concentrations are carefully regulated. Acid 286

utilization rates might have also been reduced by depletion of certain acids at the end of each 287

24 h phase. 288

For the continuous strategy, small volumes of the SCFAs were fed continuously. 289

Though FEs of the SCFAs were higher than that of the 24h feeding strategy, there were s light 290

accumulations in SCFAs towards the end of the fermentation. 291

It was thus necessary to develop an optimal feeding strategy which could potentially 292

increase acid utilizations and FEs. The 3h feeding strategy was thus chosen. Since the SCFAs 293

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were added in smaller doses at shorter intervals, pH of the medium was more efficiently 294

regulated, which resulted in better utilization and 100% FE of the organic acids. 295

In comparison to the prior aerated shake flasks trials (Table 5), which were fed with 296

individual SCFAs, the addition of mixed acids to the bioreactor resulted in more rapid uptake 297

of propionic acid and slower utilization of butyric acid. Propionate utilization rate rose from 298

0.046 g L-1 h-1 in aerated shake flasks [4] to approximately 0.08 g L-1 h-1 when added as a part 299

of the ARF mixture in the bioreactor trials. This was likely due to the higher cell populations 300

achieved in the bioreactor trials coupled with the fact that proprionate utilization by R. 301

eutropha is energetically favorable [36]. Moreover, addition of propionic acid in small doses 302

might have controlled the change in pH and thus resulted in better utilization. The decline in 303

the utilization rate of butyric acid, from 0.041 g L-1 h-1 when fed individually in aerated shake 304

flasks to 0.011 g L-1 h-1 in bioreactor trials, may have been due to additional ATP needed to 305

transport this acid [26, 27]. Thus utilization of other acids was preferred over butyric acid 306

when fed as a mixture for growth. 307

The high FEs for lactic and propionic acids were consistent with the metabolic 308

preference of R. eutropha, especially considering that the ARF contained 15 and 20 g L-1 of 309

these acids, respectively. The high FE of butyric acid may be due to the fact that ARF 310

contained only 2 g L-1 of this acid. While conducting the shake flask trials, we had previously 311

noted that R. eutropha did not prefer acetic acid, therefore its lower FE was not surprising. 312

Thus it can be concluded that in the 24h strategy the sudden rise in the SCFA 313

concentrations must have lowered the pH by accumulation of acid. This might have caused 314

decrease in acid consumption, FE and PHA productivity. Though the dosages of acids were 315

small for the continuous feeding, continuous addition might have lowered the efficiency of 316

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the process. The smaller dosage and the fed batch mode of the 3h feeding strategy might have 317

resulted in better control of pH and of catabolite repression. So the optimized growth 318

conditions (as discussed before) for the organism and 3h feeding strategy of ARF addition 319

was considered the best to obtain optimum PHA production by the organism. 320

Yu et al. suggested [36] in their study that an average yield of PHA was 0.39 g g-1 of 321

carbon sources (acetic, butyric and propionic acids). In the current study the highest yield of 322

about 0.2 g g-1 was observed when the 3h feeding strategy was used. Investigators have 323

reported that inexpensive carbon sources lead to low PHA productivity due to inefficient 324

utilization of nutrients by organisms [16, 32, and 33]. A majority of carbon sources was 325

probably utilized to generate energy for cell maintenance. 326

Wild type strain of R. eutropha used in this study was not able to use glucose and did 327

not completely utilize the high amount of glycerol present in the CCS medium. Recombinant 328

microorganisms can be used to increase growth rate and nutrient utilization. PHA biosynthesis 329

genes can be inserted in organisms that have wider range of utilizable substrates to increase 330

PHA productivity and PHA content. For example, the recombinant strains of R. eutropha 331

(H16) containing glucose-utilizing genes of Escherichia coli (E.coli), and E. coli harboring 332

the R. eutropha genes had higher PHA productivity and concentration as compared to the wild 333

type strain [15,16]. 334

CONCLUSION 335

Since the carbon source is a major contributor to PHA cost, inexpensive sources of 336

carbon are important. From an economical point of view, the use of purified media to increase 337

PHA yield will significantly increase the production cost. This study showed that R. eutropha 338

is capable of growing in CCS medium, a low value byproduct of ethanol industry. We also 339

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concluded that mixture of SCFAs in the same compositional ratios of ARF was not inhibitory 340

when added at stationary phase of growth. SCFAs can be diverted toward PHA production by 341

R. eutropha. As the use of purified SCFAs is cost prohibitive, developing a mixed culture 342

system to produce a mixture of SCFAs from another ethanol industry byproduct is highly 343

cost-effective. Thus utilization of inexpensive carbon sources may lead to economically 344

viable PHA production in future when superior genetics and fermentation strategies are 345

applied together. 346

Acknowledgement 347

This project was funded by South Dakota Corn Utilization Council and the 348

Agricultural Experiment Station. 349

References 350

1. Amass, W., Amass, A. and Tighe, B. (1998). A review of biodegradable polymers: use, 351

currents, developments in synthesis and characterization of biodegradable polyesters, 352

blends of biodegradable polymers and recent advances in biodegradable studies. Polym 353

Int 47, 89-144. 354

2. Braunegg, G., Sonnleitner, B. and Lafferty, R.M. (1978) A rapid gas chromatographic 355

method for the determination of poly-β-hydroxybutyric acid in microbial biomass. Eur J 356

Appl Microbiol 6, 29-37. 357

3. Byrom, D. (1992) Production of poly-β-hydroxybutyrate: poly-β-hydroxyvalerate 358

copolymers. FEMS Microbial Rev 103, 247-250. 359

4. Chakraborty, P., Gibbons, W. and Muthukumarappan, K. (2009) Conversion of short 360

chain fatty acids into polyhydroxyalkanoateby Ralstonia eutropha. J Appl Microbiol 106, 361

1995-2004 362

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5. Comeau, Y., Hall, K.J. and Oldham, W.K. (1988) Determination of poly-β-363

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31. Taniguchi, I., Sakyo, K.K. and Kimura, Y. (2003) Microbial production of 429

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feeding a mixture of L- lactic acid and acetic acid in fed batch culture of Ralstonia 432

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33. Tsuge, T. (2002) Metabolic improvements and use of inexpensive carbon sources in 434

microbial production of polyhydroxyalkanoates. J Biosc Bioeng 94, 579-584. 435

34. Williams, S.F. and Peoples, O.P. (1996) Biodegradable plastics from plants. Chemtech 436

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Ralstonia eutropha. Proc Biochem 37, 731-738. 443

444

445

446

447

448

449

450

451

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TABLES 452

Table 1. CCS composition from a dry mill ethanol plant 453

Components CCS

Dry matter % 34.9

Crude Protein % 13.7

Crude Fat (Ether extract) % 16.2

Ash % 9.5

Crude Fiber % 0.8

Copper ppm 8.3

Sodium ppm 5,620

Calcium ppm 487

Magnesium ppm 6,850

Zinc ppm 49

Phosphorus ppm 15,400

Potassium ppm 22,900

Composition is on dry matter basis 454 455

Table 2 Average growth and nutrient utilization rates of R. eutropha in CCS medium 456

through 48h in biorector. 457

458

Maximum Cell

Population (cfu ml-1)

Maximum Growth

Rate (h-1)

Ammonia Utilization

Rate

(mg L-1 h-1)

Phosphate

Utilization Rate

(mg L-1h-1)

2.3 x 1010 0.20 2.3 0.023 459

SCFA Utilization Rate (gL-1h-1)

Acetic Butyric Lactic Propionic Succinic

0.051 0.026

0.046 0.023 0.027

SCFA FE (%)

Acetic Butyric Lactic Propionic Succinic

100 100 81.25 65.5 71.2

460

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Table 3 Average growth and nutrient utilization rates of R. eutropha in CCS medium 461

through 48h in shake flasks. 462

463

Maximum Cell

Population (cfu ml-1)

Maximum

Growth Rate (h-1)

Ammonia

Utilization Rate

(mg L-1 h-1)

Phosphate Utilization

Rate

(g L-1 h-1)

2.6×109 0.13 1.7 0.022 464

SCFA Utilization Rate (g L-1 h-1)

Acetic Butyric Lactic Propionic Succinic

0.033 0.026 0.054 0.010 0.021 SCFA Fermentation Efficiency (%)

Acetic Butyric Lactic Propionic Succinic

77.6 76.2 94.2 35.6 62.7

465

466

Table 4 Comparison of all the key parameters under different ARF feeding strategies. 467

468

Key parameters

Feeding strategies

24 h Addition 3 h Addition Continuous

Addition

Cell Population at 48 h

(CFU-1ml) 4.28 x 1010a 1.70 x 1010b 1.01 x1010b

Maximum Cell

Population (CFU-1ml)

5.03 x 1010a 5.68 x 1010a 5.47 x 1010a

Ammonia Utilization

Rate (g-1L-1h)

1.2a 1.0 a 1.1a

Phosphate Utilization

Rate (g-1L-1h) 0.010a 0.013a 0.011a

Acid Utilization (g-1L-1h) Acetic 0.029a 0.052b 0.047b

Butyric 0.009a 0.010a 0.014a Lactic 0.074a 0.080a 0.078a Propionic 0.077a 0.083a 0.080a

Combined 0.20a 0.25b 0.24b Fermentation Efficiency

(%)

Acetic 58.8a 100b 98.7b Butyric 94.7a 100b 100b

Lactic 100a 100a 100a

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Propionic 95.7a 100b 95a

Combined 82.7a 100b 97.8b PHA Production

Cell Dry Weight (g-1L) 17.6a 21.13a 17.3a PHA Concentration

(g-1L) 6.42a 8.37a 6.67a

PHA Productivity

(g-1L-1h) 0.0537a 0.0697b 0.056a

PHA Content (%) 36.23a 39.52a 37.78a a,b,c Means within column not sharing common superscript differ significantly (p<0.05) 469

Table 5 Comparison of combined short fatty acid feeding of Ralstonia eutropha in shake 470

flasks 471

Parameters

Volatile Fatty Acid

Acetic

(5g L-1)

Butyric

(5g L-1)

Lactic

(8g L-1)

Propionic

(5g L-1)

Maximum Cell Population (cfu ml-1) 5.70 ×109a 6.17 ×109 ab 5.32 ×109a 6.67 ×109b

Fermentation Efficiency (%) 70.6a 95.6b 70.7a 68.6a

Acid Utilization Rate (g L-1 h-1) 0.048a 0.041a 0.080b 0.046a

PHA Concentration (g L-1) 2.9ab 4.6a 2.4b 4.3a

Cell Dry Weight (g L-1) 9.9ab 14.5b 6.0a 14.7b

PHA Productivity (g L-1 h-1)) 0.024ab 0.037a 0.020b 0.036a

PHA Content (%) 29.2a 31.9a 30.7a 29.3a a,b Means within column not sharing common superscript differ significantly (p<0.05). 472

FIGURES 473

474

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0

0.2

0.4

0.6

0.8

1

1.2

1.4

1.6

1.8

2

0 5 10 15 20 25 30 35 40 45 50

Time (h)

Co

nce

ntr

ati

on

(g

L-1

)

1.00E+07

1.00E+08

1.00E+09

1.00E+10

1.00E+11

Cel

l P

op

ula

tio

n (

cfu

ml-1

)

475

Figure 1 Average growth rate and organic acid utilization during the initial 48 h 476

incubation in the CCS medium. The values for average cell count (■), acetic acid 477

utilization (Δ), butyric acid utilization (◊), lactic acid utilization (□) propionic acid 478

utilization (▲) and succinic acid utilization (×) are indicated. Values are the means of 479

two replications with standard deviation showed by error bars. 480

481

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0

1

2

3

4

5

6

7

8

9

0 20 40 60 80 100 120 140

Time (h)

Co

nce

ntr

ati

on

(g

L-1

)

1.00E+06

1.00E+07

1.00E+08

1.00E+09

1.00E+10

1.00E+11

Cel

l P

op

ula

tio

n (

cfu

ml-1

)

482

483

484

Figure 2 Acid utilization and growth of Ralstonia eutropha with 24 h interval additions 485

of ARF. The values for cell count (■), acetic acid utilization (Δ), butyric acid utilization 486

(◊), lactic acid utilization (□), propionic acid utilization (▲), succinic acid utilization (×) 487

and PHA concentration (O) are indicated. Values are the means of two replications with 488

standard deviation showed by error bars. 489

490

491

492

493

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0

1

2

3

4

5

6

7

8

9

0 20 40 60 80 100 120 140

Time (h)

Co

nce

ntr

ati

on

(g

L-1

)

1.00E+06

1.00E+07

1.00E+08

1.00E+09

1.00E+10

1.00E+11

Cel

l P

op

ula

tio

n (

cfu

ml-1

)

494

495

Figure 3 Acid utilization and growth of Ralstonia eutropha with 3 h interval additions of 496

ARF. The values for cell count (■), acetic acid utilization (Δ), butyric acid utilization (◊), 497

lactic acid utilization (□), propionic acid utilization (▲), succinic acid utilization (×) and 498

PHA concentration (O) are indicated. Values are the means of two replications with 499

standard deviation showed by error bars. 500

501

502

503

504

505

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0

1

2

3

4

5

6

7

8

9

0 20 40 60 80 100 120 140

Time (h)

Co

nce

ntr

ati

on

(g

L-1

)

1.00E+06

1.00E+07

1.00E+08

1.00E+09

1.00E+10

1.00E+11

Cel

l P

op

ula

tio

n (

cfu

ml-1

)

506

Figure 4 Acid utilization and growth of Ralstonia eutropha with continuous ARF 507

addition. The values for cell count (■), acetic acid utilization (Δ), butyric acid utilization 508

(◊), lactic acid utilization (□), propionic acid utilization (▲), succinic acid utilization (×) 509

and PHA concentration (O) are indicated. Values are the means of two replications with 510

standard deviation showed by error bars. 511

512

513

514

515

516

517

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518

519

520

521

522

523

524

525

526

527

528

529

530

531

532

533

534

535

536

537 538