a free energy landscape of the capture of co by frustrated
TRANSCRIPT
1
A free energy landscape of the capture of CO2 by frustrated Lewis pairs
Lei Liu,a,b*† Binit Lukose,c Bernd Ensing d*
a Department of Physics & Earth Sciences, Jacobs University Bremen, Campus Ring
1, 28759 Bremen, Germany
b Mulliken Center for Theoretical Chemistry, Institute for Physical and Theoretical
Chemistry, University of Bonn, Beringstr. 4, 53115 Bonn, Germany
c School of Electrical and Computer Engineering, Boston University, 02215 Boston, USA
d Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, 1098 XH
Amsterdam, The Netherlands
† Current address: Max Planck Institute for Polymer Research, Ackermannweg 10, 55128
Mainz, Germany
2
Abstract: Frustrated Lewis pairs (FLPs) are known for its ability to capture CO2.
Although many FLPs have been reported experimentally and several theoretical studies
have been carried out to address the reaction mechanism, the individual roles of Lewis
acids and bases of FLP in the capture of CO2 is still unclear. In this study, we employed
density functional theory (DFT) based metadynamics simulations to investigate the
complete path for the capture of CO2 by tBu3P/B(C6F5)3 pair, and to understand the role
of the Lewis acid and base. Interestingly, we have found out that the Lewis acids play
more important role than Lewis bases. Specifically, the Lewis acids are crucial for
catalytical properties and are responsible for both kinetic and thermodynamics control.
The Lewis bases, however, have less impact on the catalytic performance and are mainly
responsible for the formation of FLP systems. Based on these findings, we propose a
thumb of rule for the future synthesis of FLP-based catalyst for the utilization of CO2.
Keywords: CO2 capture; frustrated Lewis pairs; metadynamics simulations; free energy
surface
3
TOC
The role of Lewis acids and bases in the capture of CO2 by frustrated Lewis pairs is
determined by density functional theory based metadynamics simulations.
4
Introduction
The grown use of fossil fuels has resulted in large amount of CO2 being exhausted to the
atmosphere, which is considered as the major reason for global warming.1 On the positive
side, CO2 is an abundant and renewable carbon source, and it can be reduced to some
usable chemicals.2 To convert CO2 to chemicals, we firstly need to transfer the gas-phase
molecule into the solution or solid-state phase, say, by adsorbing or capturing it. This
process is typically accomplished via surface catalysis.3 However, this method is not
economically and environmentally friendly due to the introduction of transition metal
centers. Recently, Stephan and co-workers developed some concept molecules, called
“frustrated Lewis pairs” (FLPs), which may help solve the problem.4 In those molecules,
the Lewis acids and Lewis bases are sterically hindered by the presence of bulky organic
substituents, which prevent the neutralization reaction between the two components. As a
result, both reactivity of Lewis acid and base are remained in one FLP system, hence it
shows some interesting applications, such as H2 activation, capture of CO2 (see Scheme 1)
and reduction of CO2.5–12
After their discovery, the concept of FLPs have been expanded to many other systems
consisting of P/B or P/N compounds, and all these pairs have been found to capture CO2
in similar fashion. Their interesting properties have also attracted interests from
theoretical and computational chemists.13–18 Until now, two typical reaction mechanisms
have been reported in the literature. The first one, which is based on static density
functional theory (DFT) calculations, shows that the Lewis acids and bases work in a
cooperative way, and the capture of CO2 by FLPs follows a concerted mechanism.13 The
second one, which is based on the ab initio molecular dynamics (AI-MD) simulations,
shows that the capture of CO2 by FLPs follows a step-wise mechanism.16 However, no
studies on the individual roles of Lewis acid and base have been reported. Due to the lack
of that knowledge, a targeted experiment or a rational design of FLP-based catalyst for
capture and reduction of CO2 is not immediately expected.
In this study, we performed metadynamics simulations based on density functional
theory with dispersion corrections (DFT-D) to compute the free energy surface (FES) at a
finite temperature and to explore the lowest free energy reaction path for the capture of
5
CO2 by the prototypical FLP: tBu3P/B(C6F5)3 (Scheme 1).13 By analyzing the FES, we
also aim to understand a detailed reaction path, specifically to unravel the individual roles
of Lewis acid and base in the capture of CO2.
Scheme 1. Capture of CO2 by an intermolecular FLP, tBu3P/B(C6F5)3.
Results and discussion
We first performed ab initio DFT-based MD simulations using a CO2−FLP adduct,
[tBu3PCOOB(C6F5)3]. We adopted this treatment because the structure of CO2−FLP
adduct has been confirmed by X-ray crystallography measurements while the structures
of free CO2 and FLP are unclear because of their complexity.13 Hence, in the course of
MD simulations, we firstly followed CO2 liberation process, instead of CO2 capture. On
the other hand, to cover the whole free energy surface, we performed relatively long
simulations that cover both the CO2 liberation and capture processes. (See Figure S1 for
the distances between P, B, C and O as a function of simulation time). Note that prior
DFT calculations show that the capture of CO2 by FLPs follows a concerted
mechanism.13,15 The reactants (FLP and free CO2 molecule) and the CO2−FLP adduct are
connected by only one transition state (TS). In the structure of TS, both P-C and B-O
distances are around 2.5 Å. That means, C and O start to interact with P and B nearly at
the same time. However, ab initio molecular dynamics (AIMD) simulations reveal a step-
wise mechanism.16 When CO2 molecule moves close to the FLP system, P-C bond is
formed, followed by the formation of B-O bond. After that, the final CO2-FLP adduct is
formed. However, this conclusion can be considered qualitative since a complete free
energy reaction path was missing. From our metadynamics simulations, we are able to
obtain the complete FES for the capture of CO2 by FLPs (Figure 1), which is more
rigorous than the reaction profile obtained either by the static DFT calculations or by
AIMD simulations. The FES depicted in Figure 1 shows a two-step reaction mechanism
(see path I): 1) Capture of C by Lewis base center, phosphorus (P): When CO2
6
molecules move close to FLP pair, the C of CO2 attaches to P while O remains free. 2)
Capture of O by Lewis acid center, boron (B): After the capture of C, the remained O
attaches to B. As shown in Figure 1, the reaction could also proceed in the opposite way,
i.e., O first attaches to B and then C attaches to P (see path III). However, it is apparent
that all the points along this reaction path have high Gibbs free energies, and the barriers
for this path are much higher than that of path I. On the ground of static DFT calculations,
it is commonly believed that the reaction proceeds via a concerted mechanism. Both C
and O are captured by FLPs at the same time, and pass through only one TS. From
Figure 1, one could think of such a possibility, i.e., reactant and the product are directly
connected via the path II. However, like the path III, all points along this reaction path
have high Gibbs free energies, and this will lead to high energy barrier. Therefore, the
probability of these two paths (path II and III) will be very low. If the reaction proceeds
through path II or III, it would most likely fall back into the reactant or product states,
and then proceeds via path I. Justifying this, we obtained some structures in which both
the O−B and P−C bond lengths are about 2.5 Å around 15 ps and some other structures in
which the O−B bond length is about 2.5 Å while P−C length is about 4 Å around 25 ps.
these structures return to either reactant or product state after several picoseconds, instead
of taking path II or path III.
In short, the capture of CO2 by tBu3P/B(C6F5)3 pair is a step-wise process: firstly, C
attaches to P and then O to B. It is important to point out that, the previous AIMD
simulations has also reported a step-wise mechanism.16 However, the authors attribute
this to the explicit presence of solvent molecules in the simulations. Here, we show that
the step-wise mechanism is the nature of the reaction between FLP and CO2, as it
happens despite the absence of solvent molecules in our simulations. Eventually, the role
of the solvent is to stabilize the final products, which is a common viewpoint in the FLP
chemistry.19–21
7
Figure 1. Two-dimensional free energy surface of the capture of CO2 by tBu3P/B(C6F5)3 pair. The
representative structures are depicted in Figure 3.
Now, to understand the individual roles of Lewis acids and bases and to systematically
design more efficient catalysts in the future, we have calculated one-dimensional (1D)
FES (shown in Figure 2) for the path I depicted in Figure 1. We note that the first step,
i.e., the capture of C by P atom, has two sub-steps: from A to B and from B to C. Point B
is an intermediate on the 1D FES along the path where P−C bond is formed. The first
sub-step, from A to B, has almost four times higher energy barrier than that of the second
sub-step, from B to C (11.4 kcal mol−1 versus 3.2 kcal). However, the second sub-step is
more energetically favored compared to the first one. The computed reaction Gibbs free
energy of the second sub-step is −5.6 kcal mol−1, while it is 9.5 kcal mol−1 for the first
sub-step. In short, the first step, capture of C by Lewis base (P atom), that is from A to C,
is an endothermic process with a computed reaction Gibbs free energy of 3.9 kcal mol−1
and has an overall energy barrier of 11.4 kcal mol−1. The second step from C to D is,
however, favored by thermodynamics and the computed reaction Gibbs free energy is
−5.8 kcal mol−1. Moreover, this step (from C to D) has a higher energy barrier compared
8
to the first step (14.5 kcal mol−1 versus 11.4 kcal mol−1). According to the transition state
theory (Equation 1), the second step is approximately 180 times slower than the first step.
In short, the second step, which is the capture of O by B, is a thermodynamic and kinetic
control step for the capture of CO2 by tBu3P/B(C6F5)3 pair. In other words, Lewis acid
(the B(C6F5)3 molecule) plays a more important role than Lewis base (the tBu3P molecule)
in the capture of CO2. This finding is surprising since it is commonly believed that Lewis
acids and bases work in a cooperative way and both components are important for the
reactivity of FLPs with CO2. This is also different from what we have found for the H2
activation by FLPs, where Lewis acid is responsible for thermodynamics while the Lewis
base is responsible for the kinetics.22 Our finding suggests that more attention should be
paid to the Lewis acids part of FLPs in future studies regarding CO2 capture. By
thermodynamics, strong Lewis acids should be selected to make the overall reaction
endothermic. On the other hand, the Lewis acids should not be too strong, otherwise, the
final products will be too stable (i.e. D in Figure 2) and that will lead to non-reversible
reactions.23 This will not be suitable for the future utilization of the solution-phase CO2,
like the reduction of CO2 into useful chemicals. Kinetics of the reaction suggest that
relatively strong Lewis acids are needed to lower the energy barriers.17 Also, relatively
week Lewis bases should be selected to have less stable intermediates along the reaction
path (i.e. C in Figure 2), which would result in relatively small energy barriers for the
second step. However, the Lewis bases should not be too week, otherwise, the energy
barriers for the first step will become too high, which is also not suitable for the overall
reaction kinetics.
9
Figure 2. One-dimensional free energy surface of the capture of CO2 by tBu3P/B(C6F5)3 pair. The
representative structures are depicted in Figure 3.
Geometrical parameters of the four minima and the three TSs are depicted in Figure 3.
The structures are denoted as A, B, C, D, TS1, TS2 and TS3 as marked in Figure 2. The
structure A is the starting point of the reaction. In this structure, the CO2 molecule is still
free, and no interactions have been found between the CO2 and tBu3P/B(C6F5)3 pair. For
evidence, the P−C and B−O distances are 3.9 and 4.0 Å, respectively and corresponding
Wiberg Bond Orders (WBO) are computed to be 0. The distance between two reactive
centers (P and B) are relative large, which is 4.7 Å. Note that the angle O−C−O of the
CO2 species is 167.8 º, which is slightly smaller than that in a free CO2 molecule (i.e.,
180.0 º). That is, the CO2 species is bent in structure A, although there are no chemical
bonds formed between the CO2 and FLP. This could be due to the weak interaction
between CO2 and FLP: CO2 interacts with crystal fields created by the FLP pair.24 The
next minimum on the potential energy surface is structure B. CO2 starts to enter the cave
of the FLP and interacts with the Lewis acid and base centers. Both P−C and B−O
distance become shorter, which are 3.2 and 3.4 Å, respectively. The computed WBO is
0.25 for P−C bond. indicating that the empty orbitals of C start to interact with the lone
pair electrons of P. However, there are no interactions between O and the Lewis acid
10
center (B) since the computed WBO is 0. When the reaction continues, it will arrive at
structure C, in which the P−C bond is formed with a length of 2.1 Å and the
corresponding WBO is 0.90. In this structure, O is still free, and the B−O distance is
about 3.1 Å with a computed WBO of 0.0. Moreover, the angle O−C−O of the CO2
further decreases to 135.1 º. The final minimum of the FES is the CO2−FLP adduct,
which is given as D. In this structure, the CO2 species is finally bounded to the FLP with
distances of P−C and B−O being 1.9 and 1.6 Å, respectively. The O−C−O angle of the
CO2 species is again decreased to 130.4 º. The computed corresponding WBO shows
chemical bond characteristic of P−C and B−O bonds, which are 0.8 and 0.7, respectively.
In general, the geometric parameters of the TSs stay between their neighboring stationary
points. For example, TS1, which connects the structures A and B show shorter P−C
distance than A, but longer than B (3.7 Å > 2.7 Å > 2.2 Å). Similar trends have been also
found in the case of TS2. Essentially TS1 and TS2 correspond to the capture of C by P.
Therefore, the distance between B and O remains almost the same with small deviations
of 0.3 Å except for structure A. This trend also applies for TS3, which corresponds to the
capture of O by B. The distance between P and C remains nearly the same for C, TS3,
and D, with a change of only 0.2 Å while the distance between B and O gradually
decreases from 3.1 Å to 1.6 Å. Interestingly, the highest change in the O−C−O angle
happens when C is captured by P (from 172 º to 135 º); in the next step, i.e., capture of O
by B, the change is only about 5 º.
11
Figure 3. Structures of stationary points for the capture of CO2 by tBu3P/B(C6F5)3 pair obtained from
metadynamics simulations with selected distances given in Å and Wiberg bond orders in parentheses.
Hydrogen atoms are omitted for clarity. Color legend: P yellow, B pink, C black and F green.
To gain deeper insight into the reaction mechanism, we have plotted the frontier
molecular orbitals (including the highest occupied molecular orbital, HOMO, and the
lowest unoccupied molecular orbital, LUMO) and performed natural orbital (NBO)
analysis for the important stationary points along the reaction path - structures A, C and
D (see Figure 4). In structure A, the HOMO is located on the Lewis base component
(the tBu3P molecule), and it has large contributions from the lone pair electrons of P. The
LUMO is located on the Lewis acid component (the B(C6F5)3 molecule), mainly
consisting of the empty orbitals of B. The frontier molecular orbitals indicate no orbital
interactions between the FLPs and the CO2 in structure A, which is consistent with the
geometric parameters depicted in Figure 3, where the distance between CO2 and two
reactive centers (P and B) are too large (ca. 4 Å). When the reaction arrives at structure C,
the plotted orbitals demonstrate that there are some orbital interactions between C and P.
For example, the HOMO of structure C shows that C accepts the lone pair electrons of P.
There are also some charges transferred from C to P (or electrons transfer from P to C).
12
In structure A, the P and C are positively charged with partial charges of 0.68 e and 0.86
e, respectively. In structure C, the partial charge of P increases to 1.01 e and the partial
charge of C decreases to 0.66 e. The LUMO of structure C is almost identical to that of
structure A, which is mainly consisting of empty orbitals of B. Moreover, there is no
change on the partial charge of B. When the reaction arrives at structure D, more charge
transfer is seen from P to CO2, and subsequently to B. The partial charge on P is 1.32 e in
structure D while it is 1.01 e in structure C. The partial charge of B decreases to 0.68 e
while it is about 0.83 e when the distance between O and B are relatively large (ca. 4 Å in
the cases of structure A and C). It is interesting to point out that the charge of the whole
CO2 molecule is almost the same in the cases of structure C and D, which is about -0.6 e.
This finding indicates that the CO2 molecule acts as a “bridge” for the charge transfer
from P to B. For a comparison, H2 molecule has the same function and it intermediates
the charge transfer from Lewis base to acid during H2 activation by FLPs.23,25,26
Figure 4. Highest occupied molecular orbital (HOMO), lowest unoccupied molecular orbital (LUMO)
and natural charges for selected atoms of the important structures provided in Figure 3. Color legend:
P yellow, B pink, C black, F green and H white.
Conclusions
13
In this study, the capture of CO2 molecule by tBu3P/B(C6F5)3 frustrated Lewis pair is
revisited by the density functional theory (DFT) based metadynamics simulations. The
obtained lowest free energy reaction path is more eventful than explained in the literature,
which are obtained by static DFT calculations and ab initio molecular dynamics
simulations. Importantly, the separate roles of the Lewis acid and base are revealed in our
study, which have not been described in the literature. Specifically, the capture of CO2 by
tBu3P/B(C6F5)3 pair is a step-wise process: capture of C by P followed by capture of O by
B. It is commonly believed that the roles of Lewis acid and base centers are the same,
capturing CO2 in a cooperative way and having equal contributions. Thus, modifications
of either Lewis acid or base have the same effects on the reactivity between FLPs and
CO2. However, our findings derived from metadynamics simulations are in contrary to
that. Along the reaction path, the capture of O by B has a higher energy barrier than the
capture of C by P, indicating this step is a rate-determining step. The former process is
strongly exothermic while the latter is slightly endothermic. In short, the Lewis acid
component, B(C6F5)3, plays more important role than Lewis base component in the
capture of CO2 by FLPs. The Lewis acid component is responsible for both
thermodynamics and kinetic control. The overall thermodynamics is determined by the
strength of the Lewis acids and the overall reaction rate is determined by the strength of
the Lewis acids as well. As a thumb of rule, we suggest that future synthetic studies on
the FLP or FLP-based system for activation of CO2 should choose strong Lewis acids to
make the reaction possible in terms of thermodynamics. Moreover, a combination of
strong Lewis acids and week Lewis bases should be selected to make the reaction feasible
in terms of kinetics. In this vein, we believe that the presented conclusions are vital for
the rational design of FLP-based catalyst for activation of CO2.
Computational details
We performed all simulations similar to that in our earlier studies.22 In short, Density
functional theory (DFT) calculations were performed using CP2K program using mixed
Gaussian and plane wave (GPW) basis sets. We used the PBE density functional27
augmented with the Grimme D3 dispersion correction.28 To avoid spurious interactions
14
due to the periodicity of the planewave basis, we used the Martyna-Tuckermann
technique29 and a rather large 20×20×20 Å unit cell. The ab initio molecular dynamics
(AIMD) simulations were done using NVT ensemble, with temperature set at 300 K by
making use of Nose–Hoover chain thermostat of length 4. The MD time step was 0.5 fs
and the simulations ran for 35 ps in total.
For the metadynamics simulations, we used three collective variables (CVs) to bias the
making and breaking of bonds between the P, B, C and O, for example: (1) the
coordination between the P and C, cn(P−C); and (2) the coordination between the B and
O, cn(B−O). Quadratic walls were used to avoid the sampling of uninteresting parts of
the configuration space. For example, the distance between P and B was limited to be less
than 4.5 Å, and the P−C and B−O distances were restricted to be at most 3.5 Å. The
Gaussian bias potentials were initially spawned every 25 time steps, with a height of 0.25
kcal mol‒1 and widths of 0.15 kcal mol‒1. After 20 ps of metadynamics simulation, the
height was reduced to 0.10 kcal mol‒1 and the deposit interval to 50 MD steps.
The relative reaction rates are estimated via equation 1.
(1)
where R= 1.987×10-3 kcal∙mol-1∙K-1. T is the temperature. ∆G≠ is the Gibbs activation
energy. kb and h are the Boltzmann and Planck constants, respectively.
Associated content
Supporting Information
The supporting information is available free of charge on the ACS publication website at
http://pubs.acs.org.
Additional information on path-metadynamics simulations and the Cartesian
coordinates of the seven structures depicted in Figure 3.
Movie of molecular dynamics simulations at 300 K.
Author information
- G
b RTk T
k eh
15
Corresponding Authors
L.L, [email protected]; B. E, [email protected]
Notes
The authors declare no competing financial interest.
References
(1) Solomon, S.; Plattner, G. K.; Knutti, R.; Friedlingstein, P. Proc. Natl. Acad. Sci. U.
S. A. 2009, 106 (6), 1704.
(2) Huang, K.; Sun, C. L.; Shi, Z. J. Chem. Soc. Rev. 2011, 40 (5), 2435.
(3) H. J. Freund; Roberts, M. W. Surf. Sci. Rep. 1996, 25 (228), 225 273.
(4) Welch, G. C.; San Juan, R. R.; Masuda, J. D.; Stephan, D. W. Science 2006, 314
(5802), 1124.
(5) Stephan, D. W.; Erker, G. Angew. Chem. Int. Ed. 2010, 49 (1), 46.
(6) Stephan, D. W.; Erker, G. Chem. Sci. 2014, 5 (7), 2625.
(7) Stephan, D. W.; Erker, G. Angew. Chem. Int. Ed. 2015, 54 (22), 6400.
(8) Stephan, D. W. J. Am. Chem. Soc. 2015, 137 (32), 10018.
(9) Bayne, J. M.; D. W. Stephan. Chem. Soc. Rev., 2016, 45 (4), 765.
(10) Stephan, D. W. Acc. Chem. Res. 2015, 48 (2), 306.
(11) Stephan, D. W. Science 2016, 354 (6317), aaf7229.
(12) Frédéric-Georges Fontainea; W.Stephan, D. Curr. Opin. Green Sustain. Chem.
2017, 3, 28.
(13) Mömming, C. M.; Otten, E.; Kehr, G.; Fröhlich, R.; Grimme, S.; Stephan, D. W.;
Erker, G. Angew. Chem. Int. Ed. 2009, 48 (36), 6643.
16
(14) Federica Bertini; Lyaskovskyy, V.; Timmer, B. J. J.; Kanter, F. J. J. de; Lutz, M.;
Ehlers, A. W.; Slootweg, J. C.; Lammertsma, K. J. Am. Chem. Soc., 2012, 134 (1),
201.
(15) Zhu, J.; An, K. Chem. Asian J. 2013, 8 (12), 3147.
(16) Pu, M.; Privalov, T. Chem. Eur. J. 2015, 21 (49), 17708.
(17) Liu, L.; Vankova, N.; Heine, T. Phys. Chem. Chem. Phys. 2016, 18 (5), 3567.
(18) Chi, J. J.; Johnstone, T. C.; Voicu, D.; Mehlmann, P.; Dielmann, F.; Kumacheva,
E.; Stephan, D. W. Chem. Sci. 2017, 8 (4), 3270.
(19) Schirmer, B.; Grimme, S. Top. Curr. Chem. 2013, 332, 213.
(20) Özgün, T.; Bergander, K.; Liu, L.; Daniliuc, C. G.; Grimme, S. Chem. Eur. J.
2016, 22 (34), 11958.
(21) Özgün, T.; Ye, K.; Daniliuc, C. G.; Wibbeling, B.; Liu, L.; Grimme, S.; Kehr, G.;
Erker, G. Chem. Eur. J. 2016, 22 (17), 5988.
(22) Liu, L.; Lukose, B.; Ensing, B. J. Phys. Chem. C 2017, 121 (4), 2046.
(23) Liu, L.; Vankova, N.; Mavrandonakis, A.; Heine, T.; Röschenthaler, G.; Eicher, J.
Chem. Eur. J. 2013, 19 (51), 17413.
(24) Grimme, S.; Kruse, H.; Goerigk, L.; Erker, G. Angew. Chem. Int. Ed. 2008, 49 (8),
1402.
(25) Rokob, T. A.; Hamza, A.; Stirling, A.; Soós, T.; Imre, P. Angew. Chem. Int. Ed.
2008, 47 (13), 2435.
(26) Liu, L.; Petkov, P.; Heine, T.; Röschenthaler, G.; Eicher, J.; Vankova, N. Phys.
Chem. Chem. Phys. 2015, 17 (16), 10687.
(27) Perdew, J. P.; Burke, K.; Ernzerhof, M. Phys. Rev. Lett. 1996, 77 (18), 3865.
17
(28) Grimme, S.; Antony, J.; Ehrlich, S.; Krieg, H. J. Chem. Phys. 2015, 132 (15),
154104.
(29) Tuckerman, M. E.; Martyna, G. J. J. Phys. Chem. B 2000, 104 (2), 159.