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A Fully Integrated Cancer Company.
Jefferies 2015 Healthcare Conference
June 2, 2015
Robert Mulroy, President & CEO
Forward Looking Statements
2
To the extent that statements contained in this presentation are not descriptions of historical facts, they are forward-
looking statements reflecting the current beliefs and expectations of management made pursuant to the safe harbor
provisions of the Private Securities Litigation Reform Act of 1995, as amended. Forward-looking statements include any
statements about Merrimack’s strategy, future operations, future financial position and future expectations and plans and
prospects for Merrimack, and any other statements containing the words “anticipate,” “believe,” “estimate,” “expect,”
“intend,” “may,” “plan,” “predict,” “project,” “target,” “potential,” “will,” “would,” “could,” “should,” “continue,” and similar
expressions. In this presentation, Merrimack’s forward-looking statements include, among others, statements about the
New Drug Application that Merrimack submitted to the FDA, the market opportunity and potential eligible patient
populations for its investigational therapeutics, Merrimack’s plans to commercialize MM-398, the potential timing and
amounts of payments under its partnership with Baxter, the sufficiency of data from Merrimack’s Phase 2 clinical trial of
MM-302 to support an application for accelerated approval by the FDA, the potential effectiveness and safety profile of
Merrimack’s investigational therapeutics in certain patient populations or subpopulations, Merrimack’s ability to develop
predictive diagnostics, the timing of initiation and completion of new clinical trials, the timing of availability of clinical trial
data and Merrimack’s ability to translate clinical data into future clinical success. Such forward-looking statements
involve substantial risks and uncertainties that could cause Merrimack’s clinical development programs, future results,
performance or achievements to differ significantly from those expressed or implied by the forward-looking statements.
Such risks and uncertainties include, among others, the uncertainties inherent in the initiation of future clinical trials,
availability of data from ongoing clinical trials, expectations for regulatory approvals, development progress of
Merrimack’s companion diagnostics, availability of funding sufficient for Merrimack’s foreseeable and unforeseeable
operating expenses and capital expenditure requirements, and other matters that could affect the availability or
commercial potential of Merrimack’s drug candidates or companion diagnostics. Merrimack undertakes no obligation to
update or revise any forward-looking statements. Forward-looking statements should not be relied upon as representing
Merrimack’s views as of any date subsequent to the date hereof. For a further description of the risks and uncertainties
that could cause actual results to differ from those expressed in these forward-looking statements, as well as risks
relating to Merrimack’s business in general, see the “Risk Factors” section of Merrimack’s Quarterly Report on Form 10-
Q filed with the Securities and Exchange Commission (SEC) on May 7, 2015 and other reports Merrimack files with the
SEC.
© Merrimack Pharmaceuticals, Inc. 2015
Integrated Medicine
Systems Foundation
Precision Diagnostics
Targeted TherapiesClinical
Translation
A Fully Integrated Cancer Company
© Merrimack Pharmaceuticals, Inc. 2015 3
Recent Progress/Highlights
4
•Robust Ph3 data in post-gem pancreatic cancer
•Fast Track rolling NDA submission completed in April
•Preparing for US approval and launch targeting ~19,000 patients
MM-398 NDA Filing
•Entered into a $970M Ex-US partnership for MM-398
•$250M near term funding expansion/commercial
•Development plan for 1L pancreatic and gastric
Baxter Partnership
•128 Ph2 BM+ patients w/ HRs between 0.26-0.37
•Registration path planned in breast and lung cancer
•Targeting >300,000 HRG+ BC & NSCLC patientsMM-121
•Launched Ph2 3L HER2+ breast cancer trial
•Designed for potential Accelerated Approval application
•Targeting ~8,000 US patients post T-DM1MM-302
© Merrimack Pharmaceuticals, Inc. 2015
Systems-Based Drug Discovery
Gene Protein Network
Network dynamics govern cell decisions
• Systems dynamics is a way to evolve our understanding of cancer and our ability to develop targeted therapies
• Predictive models enable more precise targeting and the development of diagnostics• Simulations inform the engineering of drugs and the understanding of their pharmacodynamics • Paired with deep technological expertise, this approach enables rapid development of new therapies
with a strong clinical rationale
5© Merrimack Pharmaceuticals, Inc. 2015
Systems-Driven Clinical Insights
Resistance Exposure Synergy
Network Dx uAnatomy Dx
© Merrimack Pharmaceuticals, Inc. 2015 6
Drugs Engineered to Specific Cancer Biology
PCMM-310
undisclosed
MM-131c-Met & EpCAM
DX-929Nano-imaging agent
Phase 1
MM-302
nano-doxorubicin
MM-151
EGFR
Phase 2MM-121
ErbB3
MM-141IGF1R-ErbB3
MM-111ErbB2-ErbB3
MM-302nano-doxorubicin
Phase 3
MM-398
irinotecan liposome injection
7© Merrimack Pharmaceuticals, Inc. 2015
nanoliposomes antibody-targetednanoliposomes
mAb bi-specificantibodies
oligoclonal
MM-398 MM-302MM-310
MM-121 MM-141MM-131
MM-151
Systems Diagnostics
Network Inhibitors
Targeted Cytotoxics
MACK IM Regimens
Rational Development of Integrated Medicines
Network Activation:
Deposition:
398 302
310 312
121 111
151 141
FMX Dx929
Dx121 Dx111
Dx141 Dx151
131 161
8© Merrimack Pharmaceuticals, Inc. 2015
9
Nano Target Payload
MM-398 Macrophages80,000 CPT-11;
locally activated SN-38
MM-302 HER230,000 Doxorubicin;
Internalized
MM-310TBA
Tumor AntigenTBA cytotoxic;
Locally activated
MM-398: 300-fold Increase in Exposure
Nanotherapeutics Designed for ProtectedDelivery and Prolonged Exposure
t1/2 (h) AUC∞(µg*h/ml)
CPT-11 .27 6
MM-398 10.7 2134
© Merrimack Pharmaceuticals, Inc. 2015
MM-398 Overview
• Nanoliposomal encapsulation of irinotecan
• Combination achieved OS endpoint in Ph3 post-gem metastatic panc cancer trial
• Fast Track and Orphan Drug designations
• Patients with high unmet need
• No clear standard of care
• Rolling NDA submission completed in April; preparing to commercialize in US
• Ex-US partnership with Baxter
10© Merrimack Pharmaceuticals, Inc. 2015
MM-398+5-FU/LV 6.1 (4.8-8.9)5-FU/LV 4.2 (3.3-5.3)
Unstratified HR: 0.67 (0.49-.092)p = 0.0122
Stratified HR: 0.57 (0.41-0.80)p = 0.0009
MM-398 Ph3 Results
Met clinical endpoints with MM-398 + 5-FU/LV combination
• Overall Survival: 0.67 HR (p=0.012)
• PFS: 0.56 HR (p=0.0001)
– Overall treatment response: 16% vs. 1% (p=<0.001)
– 12-week PFS rate: 57% vs 26%
– CA19-9 tumor marker response: 36% vs 12%
• Acceptable risk/benefit profile• Most frequent grade 3+ AEs include
neutropenia, fatigue, and GI effects
11© Merrimack Pharmaceuticals, Inc. 2015
Ov
era
ll S
urv
iva
l P
ro
po
rti
on
Time from randomization (months)
0 3 6 9 12 15 180
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
1
# at risk:
119
117
68
97
34
51
11
20
6
8
1
0
Median OS, Months (95% CI)
Intent to Treat (ITT1) Population
1) Protocol-defined primary analysis data cut (14Feb2014, after 305 events). Survival follow-up is ongoing and the final results will be reported once all patients are off treatment and at least 90% events have taken place.
2) Protocol-defined primary analysis data cut (14Feb2014, after 305 events). Per protocol population was defined as patients who received at least 80% of the protocol defined treatment during the first 6 weeks of treatment and did not have protocol deviations related to inclusion/exclusion criteria, receiving prohibited therapies or not receiving treatment as randomized.
Ov
era
ll S
urv
iva
l P
rop
ort
ion
Time from randomization (months)
0 3 6 9 12 15 180
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
1
# at risk:
71
66
52
63
25
38
10
16
6
6
1
0
Per Protocol (PP2) Population
MM-398+5-FU/LV 8.9 (6.4-10.5)5-FU/LV 5.1 (4.0-7.2)
Stratified HR: 0.47 (0.29-0.77)p = 0.0018
Median OS, Months (95% CI)
US EU28 JP
Diagnosed Incidence
45 76 30
First-line 4.2 7.0 1.0
Second-line 10.5 14.1 5.0
Third-line + 4.0 4.7 2.3
Total Eligible 18.7 25.8 8.3
Post-Gemcitabine PanC Opportunity
Positive Post-Gemcitabine Metastatic Patient Dynamics
• Patients receive gemcitabine in all lines of therapy
• Differentiated from “second-line” therapy
• ~19,000 eligible patients in US
• Post-gemcitabine treatment rates growing
Significant Worldwide Opportunity Annually (000’s)
B
A
C
12© Merrimack Pharmaceuticals, Inc. 2015
13
New Standard of Care Opportunity
Oncologists View of MM-398
60%37%
3%0%
20%
40%
60%
80%
Superior toSome or All
Equivalent SlightlyInferior
% P
olle
d O
nc
olo
gis
ts*
*Source: Clarion TPP Analysis, July, 2014
MM-398 regimen viewed more favorably than FOLFOX across dimensions of efficacy, safety and dosing*
13
0%
20%
40%
60%
80%
100%
Current 2L Practice
8% Gem/Tarceva®
20% Gem Mono
20% Gem/Abraxane®
20% Capecitabine
20% FOLFOX
10% FOLFIRINOX
% S
ha
re*
2% Other
© Merrimack Pharmaceuticals, Inc. 2015
MM-398 Diagnostic Approach with Ferumoxytol*
14
Be
st C
han
ge in
Tu
mo
r Le
sio
n S
ize
Presented at ICSB 2014 and AACR 2014
Pre FMX MRI 24 hours post FMX MRI
• 9 patients• 31 lesions• 6 indications
More FMX uptake
grow
stable
shrink
*The FDA has approved ferumoxytol (Feraheme®, AMAG Pharmaceuticals) for intravenous use as an iron replacement product for the treatment of iron deficiency anemia in adult patients with chronic kidney disease (CKD). The use of ferumoxytol in the pilot study mentioned above has not been approved by the FDA and is for clinical investigational studies only.
© Merrimack Pharmaceuticals, Inc. 2015
MM-398 Path Forward & Next Steps
15
• Rolling NDA submission completed in April
• Received Fast Track and Orphan Drug designations; have requested Priority Review
Regulatory
• Experienced team preparing for US launch
• Geographic concentration of pancreatic cancer centers enables focused commercial team
• Third-party market research shows favorable oncologist impression of MM-398+5FU/LV profile
Commercial
• Planning trial initiations in front-line pancreatic and HER2-negative gastric
• ISTs in glioma and Ewing’s sarcoma
• Deposition diagnostic development
Expansion
© Merrimack Pharmaceuticals, Inc. 2015
MM-302 Design Integrates Proven Therapeutic Approaches in HER2+ MBC
MM-302 antibody liposome conjugate: delivers a large chemotherapy payload
1. HER2 target validated in HER2+ MBC
2. Doxorubicin approved chemotherapy with greatest activity in HER2+ MBC
3. Liposomal Encapsulation aims to avoid cardiotoxicityof doxorubicin
16© Merrimack Pharmaceuticals, Inc. 2015
Significant Need for Improved Treatment Options in Late-line HER2+ MBC
1st Line 2nd Line3rd, 4th Line or
greater
Number of Patients (per year in US)*
8,800 7,500 8,500
Standard of Care Therapy
Pertuzumab + trastuzumab +
taxaneT-DM1 No clear SOC
Median PFS 18 months1 10 months2 3.3 months3
Clinical Outcome
• ~30% progress in 12 months
• ~20% don’t respond
• ~30% progress in <6 months
• ~55% don’t respond
• Rapid progression
• ~90% don’t respond
1CLEOPATRA, Baselga, et al 2012 2EMELIA, Verma, et al 2012 3TH3RESA, Krop, et al 2014
*Taken from Decision Resources, 2014 report17© Merrimack Pharmaceuticals, Inc. 2015
MM-302 Shows Promising Ph1 Activity
• Overall Median PFS (n=62)†
• 7.6 mo
• Greatest activity in anthracycline-naïve patients (n= 25 in anthracycline-naïve patients)
• ORR = 24% (6/25)• PFS = 11 mo
• Overall population received a median of 4 prior lines of therapy
†Includes only patients dosed at
therapeutic doses (≥30mg/m2)
Data Presented at AACR 2015
18© Merrimack Pharmaceuticals, Inc. 2015
MM-302 Phase 1 Efficacy(MM-302 alone, with trastuzumab and with trastuzumab and
cyclophosphamide)
MM-302 HERMIONE Trial:Potential Registration Path in HER2+ MBC
• Study is designed to support a potential application for accelerated approval in the U.S. and conditional marketing authorization in the E.U.
• Currently enrolling US sites: Patients with HER2+ locally advanced and metastatic breast cancer
• No restriction on number of prior lines of therapy
• Anticipate 70 sites in US, Canada and EU
• Chemotherapy of physician’s choice: one of gemcitabine, capecitabine or vinorelbine
• Primary endpoint: Hazard Ratio of 0.625 (8 mo experimental arm vs. 5 mo control arm )
Patient population
•HER2-positive MBC
•Anthracycline-naive
•Prior exposure to pertuzumab and T-DM1
Primary end-point:
Progression-Free
Survival
Ran
do
miz
atio
n 1
:1
(25
0 p
atie
nts
)
Experimental Arm
• MM-302 (Q3W)• Herceptin (Q3W)
Control Arm
• Chemo of Physician’s Choice• Herceptin (Q3W)
19© Merrimack Pharmaceuticals, Inc. 2015
MM-121: Addressing ErbB3-Driven Cancers
• MM-121 is a monoclonal antibody targeting ErbB3
• Wholly owned
About ErbB3-Driven Cancer
• Promotes resistance to therapies and worsens patient outcomes
• Spans many solid tumors
• Works in conjunction with other pathways
• Not a traditional oncogenic pathway where it is primary driver of the cancer
20
MM-121 Designed to Target Biomarker Positive (BM+) patients
# p
atie
nts
BM+ BM-
Response
• Biomarker positive patients appear to respond worse to standard-of-care (SOC) than biomarker negative patients
• Biomarker positive patients on MM-121 may respond better than biomarker positive patients on SOC alone
Unmet need
© Merrimack Pharmaceuticals, Inc. 2015
MM-121 PFS Data in Biomarker-Selected Population
Study Biomarker Positive Population
N HR Prevalence P-value
Breast 34 0.26 45% 0.003
Ovarian 57 0.37 38% 0.007
Lung 37 0.35 54% 0.008
21
0.00
0.25
0.50
0.75
1.00
0 2 4 6 8 10
0.00
0.25
0.50
0.75
1.00
0 2 4 6 8 10
Time (months) Time (months) Time (months)
paclitaxel
MM-121 +paclitaxel
exemestane
MM-121 +exemestane
erlotinib
MM-121 +erlotinib
HRGHIGH *(Archived tissue)
HRGHIGH, HER2LOW
(Pre-Rx biopsy)HRGHIGH *
(Pre-Rx biopsy)
Breast cancer Ovarian cancer Lung cancer
N=16
N=18
N=38
N=19
N=23
N=14
Comparison of MM-121+SOC vs. SOC for biomarker positive patients
* HER2 was low in the majority of breast and NSCLC samples, so HER2 measurements were not needed.
© Merrimack Pharmaceuticals, Inc. 2015
Blocking Heregulin is a Large Opportunity in Oncology
ER/PR+, HER2-
Breast
45%
Bladder
39%
Liver
48%
Pancreatic
33%
ER-/PR-/HER2+
Breast
Cervical
Lung, Adeno
Prostate
35%
59%
59%
45%
Triple Negative
Breast
Colorectal
Lung, Squamous
Melanoma
49%
28%
87%
34%
ER/PR+, HER2+
Breast
53%
Head & Neck
97%
Ovarian
Uterine
33%
21%
Data from TCGA, based on the observed prevalence of heregulin in ER/PR+, HER2- breast cancer
22© Merrimack Pharmaceuticals, Inc. 2015
MM-121: Targeted Indications Represent 326K Patients Annually
Breast cancerMM-121 + paclitaxel
HRG+(~45%)ER+, HER2-
mBCHRG-
paclitaxel
MM-121 + chemotherapyHRG+(~49%)
TNBC
HRG-
chemotherapy
Lung cancerMM-121 + docetaxel/pemetrexed
HRG+(~54%)EGFR w.t.
NSCLCHRG-
docetaxel/pemetrexed
HRG+
36K
HRG+
6K
HRG+
284K
MM-121 Eligible Patients
23© Merrimack Pharmaceuticals, Inc. 2015
G7 2013
MM-121 NSCLC Trial Initiated
• Initiated a Ph2 biomarker-selected clinical trial in patients with heregulinpositive non-small cell lung cancer (NSCLC)
– Merrimack’s first study to prospectively select patients based on heregulinstatus
– Builds on our learnings from previous MM-121 Ph2 clinical trials completed across lung, ovarian and breast cancers
– Trial will enroll 120 heregulin positive patients randomized (2:1) to receive either MM-121 plus the investigator’s choice of docetaxel or pemetrexed, or the investigator’s choice of docetaxel or pemetrexed alone
– The primary endpoint of the trial is PFS
• Development plans for breast cancer
© Merrimack Pharmaceuticals, Inc. 2015 24
MM-141 Overview
• Dual antibody inhibitor of IGF-1R and ErbB3
• Two unique mechanisms of action:
– Blocks oncogenic signaling induced by multiple growth factors: IGF-1, IGF-2 and heregulin
– Degrades receptor complexes that contain IGF-1R and ErbB3
• Orphan drug status
• Wholly owned
• Global Ph2 trial in patients with metastatic pancreatic cancer who have high serum levels of free IGF-1
© Merrimack Pharmaceuticals, Inc. 2015
Anti-IGF-1R IgG1 antibody (KD=0.3nM) genetically fused with anti-ErbB3 antibody fragment (KD=0.9nM)
25
MM-141 Ph2 Pancreatic Study Design
Front-line Metastatic
Pancreatic Cancer
Placebo +
nab-paclitaxel and gemcitabine
(73)
R
1:1
MM-141 +
nab-paclitaxel and gemcitabine
(73)
Screening
High Free IGF-
1 (158)
Low Free
IGF-1 (~104)
Observational
Group*
Interventional
Group**
Safety Run-in
(6-12)
*OS data
collection
• Patients to receive: • MM-141 (2.8 grams IV ) or placebo q2w
• Nab-paclitaxel (125 mg/m2 IV) and gemcitabine (1000 mg/m2 IV) weekly for 3 weeks
• Randomized, double-blind, placebo-controlled
• Primary endpoint: Progression-free survival • HR ≤0.63, 80% power, p=0.05
• Co-primary endpoint: PFS in HRG+ population • HR ≤0.5, 80% power, p=0.05
• Secondary endpoint: Overall survival
**Mandatory tissue
sample for HRG
analysis26© Merrimack Pharmaceuticals, Inc. 2015
Upcoming Milestones
• MM-398– NDA filing acceptance
– Initiation of front-line pancreatic and gastric trials
– Continued commercial preparation ahead of potential post-gem launch
• MM-121– Planning registration trials in ER/PR+ and TNBC
– Continued enrollment for Ph2 trial in HRG-positive NSCLC
• MM-302– Continued enrollment for HERMIONE trial in support of accelerated approval
• MM-141– Continued enrollment for Ph2 trial in IGF-1-positive 1L pancreatic cancer
• MM-151– Planning a Ph2 trial in CRC
27© Merrimack Pharmaceuticals, Inc. 2015
* None of our product candidates are approved for any indication by the FDA or any other regulatory agency.
Candidate* Design TargetInvestigational
Disease State(s)Preclinical Phase 1 Phase 2 Phase 3
MM-398Irinotecan
liposome injectionTopo I/DNA replication
Currently under FDA review
MM-302HER2-targetednanoliposomal
doxorubicin
Topo II/DNA replication
Breast
MM-121Monoclonal
antibodyErbB3 NSCLC, Breast
MM-111 Bispecific antibody ErbB3 and ErbB2 Gastric
MM-141Bispecific
tetravalent antibody
IGF-1R and ErbB3 Pancreatic
MM-151Oligoclonal
antibodyEGFR Colorectal
MM-310Targeted
nanoliposomeUndisclosed Cancer
MM-131 Bispecific antibodyHGF-R (c-Met) and
EpCAMCancer
Oncology Pipeline
AntibodiesNanoliposomes
© Merrimack Pharmaceuticals, Inc. 2015 28