ab-initio approach to differential mobilities - structures ...€¦ · -admp method...

1
Introduction Alexander Haack 1 ; Femke-Jutta Schlüter 1 ; Walter Wissdorf 1 ; Hendrik Kersten 1 ; Thorsten Benter 1 1 Physical & Theoretical Chemistry Wuppertal, Germany (Institute for Pure and Applied Mass Spectrometry) Methods Differential mobility spectrometry (DMS, FAIMS) separates charged compounds based on different gas phase mobilities at “high” and “low” electrical field conditions. Particularly in combination with mass spectrometry this technique sees increasing interest. In selected applications “chemical modifiers” (M), in essence abundant gas phase concentrations of neutral volatile compounds, are added to alter the mobility of ions (A). We propose that this creates highly dynamic and diverse cluster/decluster processes, changing the collision cross section (CCS), under periodically changing electrical field conditions. With changing ion temperature (induced by the electric field), the cluster distribution and hence the mobility periodically changes as well, depending on the binding energy and CCS change by a modifier ligand. A theoretical approach is presented here to model the overall differential mobility of an ion as the sum of the weighted mobilities of possible cluster structures at different ion temperatures. As a case study, tetra-alkylammonium (R 4 N + ) ions were selected as well as different “chemical modifiers”, since reliable experimental data are available in the literature. [1] Initially, only Me 4 N + was investigated with methanol (MeOH), iso-propyl alcohol (IPA) and acetone (ACE) as modifiers. They all show different dispersion plots (compensation voltage CV, vs. separation voltage SV), which, in our understanding, can be explained by either different changes in CCS by similar binding energy (MeOH – IPA) or different binding energy by similar change in CCS (IPA – ACE). To simplify the analysis, we assume that the clustering/declustering reactions are fast compared to the change of the electric field (approx. 10 6 Hz). Further, we assume thermal equilibrium with a given ion temperature in each of the two field states. Since ligand association/dissociation reactions are frequently barrier free, the reactions should be collisionally controlled. Assuming 3 Vol% modifier molecules present in the gas phase, there are sufficient collisions to swiftly reach equilibrium (>10 8 Hz). Software package: Gaussian09, Revision C.01 [2] for DFT calculations GaussView 6.0.16 [3] for visualization MOBCAL [4] for CCS (N 2 version of Campuzano) Python scripts for plotting Machine: Linux-based computer cluster, 4×16-Core CPUs (6282SE AMD Opteron; Advanced Micro Devices GmbH, Dornach, Germany) and 32×16 GB memory Ab-initio approach to differential mobilities - structures, energies and collision cross sections of clustered tetraalkylammonium ions Computational Details Conclusions Acknowledgement Literature Outlook [1] Campbell, Zhu, Hopkins (2014): J. Am. Soc. Mass Spectrom., 25(9), 1583–1591 [2] Frisch et al. (2009): Gaussian09, Revision C.01, Gaussian, Inc., Wallingford CT [3] Dennington II, Keith, Millam (2016): GaussView 6.0.16, Semichem, Inc. [4] (a) Mesleh et al. (1996): J. Phys. Chem., 100(40), 16082– 16086 (b) Shvartsburg, Jarrold (1996): Chem. Phys. Letters, 261(1–2), 86–91 (c) Campuzano et al. (2012): Anal. Chem., 84(2), 1026-1033 [5] Grimme (2006): J. Comp. Chem., 27(15), 1787–1799. [6] Calvo et al. (2002). Chem. Phys. Lett., 366(1–2), 176–183. [7] Haack et al., Poster No. 14, Proceedings of the 30 th ASMS Sanibel Conference on Mass Spectrometry, St. Petersburg, FL, January 25 - 28, 2018. Financial support by iGenTraX UG (Haan, Germany) is gratefully acknowledged. Analysis Comparison of / + ( − 1) + +⇌ + + Low field cluster High field cluster Low ion temperature Larger CCS High ion temperature Smaller CCS Geometry Optimization: - B3LYP-D/def2-TZVPP with empirical dispersion [5] → structure of cluster α of size n ([A+nM] + α ) Energies and partition function: - Harmonic frequency analysis on B3LYP-D/def2-TZVPP - Refined electronic energy on B2PLYP-D/def2-TZVPP → (total) molecular partition functions Q, Zero-Point Energy E ZPE and electronic energy E 0 A M A M M R 1 R 2 ω i MD Simulation: - ADMP method B3LYP-D/def2-SVP - 5000 x 0.2 fs steps - E ZPE used as kinetic energy → sampling of accessible configurational space A M CCS calculation: - 40 random config. from MD - In N 2 @ = 423.15 K → CCS distribution f CCS and average A M Quantum Harmonic Superposition Approximation: - For each molecule [A+nM] + α calculate: - Energy level E(n,α) - Molecular partition function Q(n,α) calc. at ion temperature =+ / - Q-HSA [6] partition function Z(n,α) - Canonical probability P(n,α) - Weighting to a canonical average / (, ) = [ 0 + ] + + + 0 + , = + + , = , ⋅ exp Δ(, ) + α , = , / (, ) ℎ/ = ℎ/ (, ) ⋅ ℎ/ (, ) MeOH IPA ACE - Increase in CCS is smaller than for IPA, ACE - Dispersed distributions - 90° configuration is largely different from 180° - Binding energy 0.34 eV - Boltzmann factor is higher for “high field” due to larger temperature - Partition function reduces with due to loss of translational states; is also smaller in “low field” - = 0.00, = 0.00 - Mostly bare ion present - Larger increase than for MeOH, similar to ACE - Has the largest overall CCS - 90° and 180° configuration are comparable (, ) = 18 16 1 + 1 2 (, ) 1 - Larger increase than for MeOH, similar to IPA - Distributions are rather narrow - 90° and 180° configuration are comparable Discussion - Binding energy 0.52 eV - No difference in 90°/180° configurations in energy and partition function - = 0.01, = 0.00 - Mostly bare ions - Binding energy 0.65 eV - Partition function of 180° configuration is always larger - = 0.76, = 0.10 - Mostly cluster-1 populated in low flied, but bare ion in high field - No significant difference between high and low field - The low and high field mobilities for MeOH and IPA are similar, because in both cases mostly =0 is populated → mobility of bare ions - ACE has much lower mobility because cluster-1 is mostly populated (larger CCS) - Overall, for MeOH and IPA the low field mobility is larger due to ∝ 1/ and the change in is too small to compensate this effect - For ACE, this is reversed Discussion : - The experimental data showed < for all species at a separation voltage of 2000 V (used here as well), this is only reproduced for ACE - The higher field strength (resulting in a higher ion temperature: ≈ 520 , ≈ 450 ) does not change for MeOH and IPA since the binding energy is too low to even form clusters in the low field - For ACE, however, the clusters are stable enough to populate cluster-1 in the low field. Shifting this distribution under higher field conditions changes the mean mobility to higher values - Under the given results, cluster-2 is rarely populated. The sum over all is thus nearly converged Possible sources of error: - Because of the weak binding (lack of a clear binding site) the potential is probably highly anharmonic. Hence, the harmonic-oscillator approximation for the molecular partition function used here, is erroneous. Ro- vibrational coupling is also possible - The introduction of into the Q-HSA partition function, to account for a concentration dependency of the cluster distribution, is more a good guess than mathematically deduced. Although the population then correctly shifts to higher cluster sizes with increasing [], the functional dependence may be different - To the best of our knowledge, the Q-HSA has never been used to model dissociation equilibria. It may be the model is insufficient here Method : - MD simulations around equilibrium geometry give a vibrationally averaged CCSs. They should be more accurate than those derived from equilibrium structures - Geometry and (refined) electronic energies are calculated on a good level of theory. The partition functions, however, are approximated in the usual harmonic-oscillator / rigid-rotor framework which could be insufficient for highly anharmonic clusters - Q-HSA should be a good method to obtain a distribution of the different cluster species. However, to our knowledge, it has never been used for dissociation equilibria - The assumption of thermal equilibrium at ion temperatures prevailing at high and low field conditions neglects any kinetic effects. It also neglects the sinusoidal form of the separation voltage in differential mobility spectrometers. An average over one high-low-field cycle with the correct time dependent field should be more accurate - Improved description of partition functions including anharmonic effects (e.g. ref. [7]) - Investigate the cluster distributions at another set of ion temperatures (lower separation voltage) - Investigate the [H+n(H 2 O)] + system since there is a larger amount of experimental available - Testing of our Q-HSA for known cluster distributions Case study: - In the experiment, ACE showed the larges difference between high and low field mobilities. This is reproduced in this work. The alcohols bind too weakly to even form clusters at this SV - It becomes clear that clustering of ions with modifier molecules present strongly influences the differential mobility, if the binding energy is high enough

Upload: others

Post on 02-Aug-2020

0 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Ab-initio approach to differential mobilities - structures ...€¦ · -ADMP method B3LYP-D/def2-SVP - 5000 x 0.2 fs steps-E ZPE used as kinetic energy → sampling of accessible

Introduction

Alexander Haack1; Femke-Jutta Schlüter1; Walter Wissdorf1; Hendrik Kersten1; Thorsten Benter11Physical & Theoretical Chemistry

Wuppertal, Germany

(Institute for Pure and Applied Mass Spectrometry)

Methods

Differential mobility spectrometry (DMS, FAIMS)separates charged compounds based on different gasphase mobilities at “high” and “low” electrical fieldconditions. Particularly in combination with massspectrometry this technique sees increasing interest.

In selected applications “chemical modifiers” (M), inessence abundant gas phase concentrations of neutralvolatile compounds, are added to alter the mobility ofions (A). We propose that this creates highly dynamicand diverse cluster/decluster processes, changing thecollision cross section (CCS), under periodicallychanging electrical field conditions.

With changing ion temperature (induced by theelectric field), the cluster distribution and hence themobility periodically changes as well, depending onthe binding energy and CCS change by a modifierligand.

A theoretical approach is presented here to modelthe overall differential mobility of an ion as the sum ofthe weighted mobilities of possible cluster structuresat different ion temperatures.

As a case study, tetra-alkylammonium (R4N+) ions wereselected as well as different “chemical modifiers”,since reliable experimental data are available in theliterature.[1] Initially, only Me4N+ was investigated withmethanol (MeOH), iso-propyl alcohol (IPA) andacetone (ACE) as modifiers. They all show differentdispersion plots (compensation voltage CV, vs.separation voltage SV), which, in our understanding,can be explained by either different changes in CCS bysimilar binding energy (MeOH – IPA) or differentbinding energy by similar change in CCS (IPA – ACE).

To simplify the analysis, we assume that theclustering/declustering reactions are fast compared tothe change of the electric field (approx. 106 Hz).Further, we assume thermal equilibrium with a givenion temperature in each of the two field states. Sinceligand association/dissociation reactions arefrequently barrier free, the reactions should becollisionally controlled. Assuming 3 Vol% modifiermolecules present in the gas phase, there aresufficient collisions to swiftly reach equilibrium (>108

Hz).

Software package:

Gaussian09, Revision C.01[2] for DFT calculations

GaussView 6.0.16[3] for visualization

MOBCAL[4] for CCS (N2 version of Campuzano)

Python scripts for plotting

Machine:

Linux-based computer cluster, 4×16-Core CPUs

(6282SE AMD Opteron; Advanced Micro Devices

GmbH, Dornach, Germany) and 32×16 GB memory

Ab-initio approach to differential mobilities - structures, energies

and collision cross sections of clustered tetraalkylammonium ions

Computational Details

Conclusions

Acknowledgement

Literature

Outlook

[1] Campbell, Zhu, Hopkins (2014): J. Am. Soc. Mass Spectrom.,25(9), 1583–1591

[2] Frisch et al. (2009): Gaussian09, Revision C.01, Gaussian,Inc., Wallingford CT

[3] Dennington II, Keith, Millam (2016): GaussView 6.0.16,Semichem, Inc.

[4] (a) Mesleh et al. (1996): J. Phys. Chem., 100(40), 16082–16086 (b) Shvartsburg, Jarrold (1996): Chem. Phys. Letters,261(1–2), 86–91 (c) Campuzano et al. (2012): Anal. Chem.,84(2), 1026-1033

[5] Grimme (2006): J. Comp. Chem., 27(15), 1787–1799.

[6] Calvo et al. (2002). Chem. Phys. Lett., 366(1–2), 176–183.

[7] Haack et al., Poster No. 14, Proceedings of the 30th ASMSSanibel Conference on Mass Spectrometry, St. Petersburg, FL,January 25 - 28, 2018.

Financial support by iGenTraX UG (Haan, Germany) isgratefully acknowledged.

Analysis

Comparison of 𝑲 𝒉/𝒍

𝐴 + (𝑛 − 1)𝑀 + + 𝑀 ⇌ 𝐴 + 𝑛𝑀 +Low field clusterHigh field cluster

Low ion temperatureLarger CCS

High ion temperatureSmaller CCS

Geometry Optimization:

- B3LYP-D/def2-TZVPP withempirical dispersion[5]

→ structure of cluster α of size n ([A+nM]+α)

Energies and partition function:

- Harmonic frequency analysison B3LYP-D/def2-TZVPP

- Refined electronic energy onB2PLYP-D/def2-TZVPP

→ (total) molecular partition functions Q, Zero-Point Energy EZPE and electronic energy E0

A M

AM

M R1 R2

ωi

MD Simulation:

- ADMP method B3LYP-D/def2-SVP

- 5000 x 0.2 fs steps

- EZPE used as kinetic energy

→ sampling of accessible configurational space

AM

CCS calculation:

- 40 random config. from MD

- In N2 @ 𝑇 = 423.15 K

→ CCS distribution fCCS and average 𝐶𝐶𝑆

A M

Quantum Harmonic Superposition Approximation:

- For each molecule [A+nM]+α calculate:

- Energy level E(n,α)

- Molecular partition function Q(n,α) calc.

at ion temperature 𝝑 = 𝑻 + 𝒎𝑵𝟐𝒗𝑫

𝟐 /𝟑𝒌𝑩

- Q-HSA[6] partition function Z(n,α)

- Canonical probability P(n,α)

- Weighting to a canonical average 𝑲 𝒉/𝒍

𝐸(𝑛, 𝛼) = [𝐸0 + 𝐸𝑍𝑃𝐸] 𝐴+𝑛𝑀 𝛼+ + 𝑛 − 𝑛 𝐸0 + 𝐸𝑍𝑃𝐸 𝑀

𝑄𝜗 𝑛, 𝛼 = 𝑄𝜗 𝐴 + 𝑛𝑀 𝛼+ ⋅ 𝑄𝑇 𝑀 𝑛−𝑛

𝑍𝜗 𝑛, 𝛼 =𝑀

𝑁

𝑛

𝑄𝜗 𝑛, 𝛼 ⋅ exp −Δ𝐸(𝑛, 𝛼)

𝑘𝐵𝜗

+

α

𝑃𝜗 𝑛, 𝛼 = 𝑍𝜗 𝑛, 𝛼 /

𝑛

𝛼

𝑍𝜗(𝑛, 𝛼)

𝐾 ℎ/𝑙 =

𝑛

𝛼

𝐾ℎ/𝑙(𝑛, 𝛼) ⋅ 𝑃ℎ/𝑙(𝑛, 𝛼)

MeOH IPA ACE

- Increase in CCS is smaller than for IPA, ACE

- Dispersed distributions

- 90° configuration is largely different from 180°

- Binding energy 0.34 eV

- Boltzmann factor ishigher for “high field” dueto larger temperature

- Partition function reduceswith 𝑛 due to loss oftranslational states; isalso smaller in “low field”

- 𝑛 𝑙 = 0.00, 𝑛 ℎ = 0.00

- Mostly bare ion present

- Larger increase than for MeOH, similar to ACE

- Has the largest overall CCS

- 90° and 180° configuration are comparable

𝐾𝜗(𝑛, 𝛼) =18𝜋

16⋅

1

𝑚+

1

𝑚𝑁2

⋅𝑧𝑒

𝑘𝐵𝜗 𝐶𝐶𝑆(𝑛, 𝛼)

1

𝑁

- Larger increase than for MeOH, similar to IPA

- Distributions are rather narrow

- 90° and 180° configuration are comparable

Discussion

- Binding energy 0.52 eV

- No difference in90°/180° configurationsin energy and partitionfunction

- 𝑛 𝑙 = 0.01, 𝑛 ℎ = 0.00

- Mostly bare ions

- Binding energy 0.65 eV

- Partition function of 180°

configuration is alwayslarger

- 𝑛 𝑙 = 0.76, 𝑛 ℎ = 0.10

- Mostly cluster-1populated in low flied,but bare ion in high field

- No significant differencebetween high and lowfield

- The low and high fieldmobilities for MeOH and IPA aresimilar, because in both casesmostly 𝑛 = 0 is populated →mobility of bare ions

- ACE has much lower mobilitybecause cluster-1 is mostlypopulated (larger CCS)

- Overall, for MeOH and IPA thelow field mobility is larger due

to 𝐾 ∝ 1/ 𝜗 and the change in𝐶𝐶𝑆 is too small to

compensate this effect

- For ACE, this is reversed

Discussion:

- The experimental data showed 𝐾 𝑙 < 𝐾 ℎ for allspecies at a separation voltage of 2000 V (used here aswell), this is only reproduced for ACE

- The higher field strength (resulting in a higher iontemperature: 𝜗ℎ ≈ 520 𝐾 , 𝜗𝑙 ≈ 450 𝐾 ) does notchange 𝑛 for MeOH and IPA since the binding energyis too low to even form clusters in the low field

- For ACE, however, the clusters are stable enough topopulate cluster-1 in the low field. Shifting thisdistribution under higher field conditions changes themean mobility to higher values

- Under the given results, cluster-2 is rarely populated.The sum over all 𝑍 is thus nearly converged

Possible sources of error:

- Because of the weak binding (lack of a clear binding site)the potential is probably highly anharmonic. Hence, theharmonic-oscillator approximation for the molecularpartition function 𝑄 used here, is erroneous. Ro-vibrational coupling is also possible

- The introduction of 𝑀 𝑛 into the Q-HSA partitionfunction, to account for a concentration dependency ofthe cluster distribution, is more a good guess thanmathematically deduced. Although the population thencorrectly shifts to higher cluster sizes with increasing [𝑀],the functional dependence may be different

- To the best of our knowledge, the Q-HSA has never beenused to model dissociation equilibria. It may be themodel is insufficient here

Method:

- MD simulations around equilibrium geometry give avibrationally averaged CCSs. They should be moreaccurate than those derived from equilibriumstructures

- Geometry and (refined) electronic energies arecalculated on a good level of theory. The partitionfunctions, however, are approximated in the usualharmonic-oscillator / rigid-rotor framework whichcould be insufficient for highly anharmonic clusters

- Q-HSA should be a good method to obtain adistribution of the different cluster species.However, to our knowledge, it has never been usedfor dissociation equilibria

- The assumption of thermal equilibrium at iontemperatures prevailing at high and low fieldconditions neglects any kinetic effects. It alsoneglects the sinusoidal form of the separationvoltage in differential mobility spectrometers. Anaverage over one high-low-field cycle with thecorrect time dependent field should be moreaccurate

- Improved description of partition functionsincluding anharmonic effects (e.g. ref. [7])

- Investigate the cluster distributions at another setof ion temperatures (lower separation voltage)

- Investigate the [H+n(H2O)]+ system since there is alarger amount of experimental available

- Testing of our Q-HSA for known cluster distributions

Case study:

- In the experiment, ACE showed the largesdifference between high and low field mobilities.This is reproduced in this work. The alcohols bindtoo weakly to even form clusters at this SV

- It becomes clear that clustering of ions withmodifier molecules present strongly influences thedifferential mobility, if the binding energy is highenough