agenda: 1/2 welcome back final project overview and schedule – clarification & questions...
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Agenda: 1/2
Welcome back Final project overview and schedule
– Clarification & questions
Restriction analysis challenge Samples – gene cloning
Homework: Review your lab notebook and find lab procedures that you can apply to this project. Draft 1 of lab procedure & materials in your lab notebook.
Biotechnology Final Project
Restriction Analysis:
To determine the presence of the amylase gene in a plasmid
Final Project
Individual project – no partners or teams Replaces the final exam 25% of your course grade
– Same as final exam
Restriction Analysis
Extension of your project on rDNA Use of biotechnology procedures already
practiced in the lab. Demonstrate that you can understand and
summarize technical information that provides background to your laboratory work.
Components
Literature Research to provide background to the laboratory work
Designing an experiment– Writing a lab experiment with procedures that you
will follow
Conducting the experiment Analyzing the results and making
conclusions
Gene cloning
Steps in Cloning a Gene
Schedule:
1/3: Explore the sources on the Internet– Credible sources– Understandable to you as a high school student– Provides useful information for the topic
Laboratory Work Defined: due 1/4 Hypothesis, materials & equipment & lab procedures must be
submitted prior to lab work This will be peer reviewed on Friday, 1/4 Revised lab procedure due Monday, 1/7
Schedule
Laboratory Work - 2 – 3 days (1/7?, 1/8; 1/9; 1/10?)
Background research paper due 1/9/13 Completed Laboratory Report due: 1/11/13 Final Exam Day
– Short Presentations– Reflection of your learning
What questions could someone have on the project?
Read the project description
Write questions & hand-in: Literature Research to provide background to the laboratory workDesigning an experimentConducting the experimentAnalyzing the results and making conclusions
Restriction Analysis
Restriction Analysis Challenge 2013.ppt
Research Paper – Background information
Components– Amylase enzymes for function and possible size– Process of incorporating desired genes into plasmids &
then bacteria– Detection of successful take-up of desired DNA
fragment by plasmids & then into bacteria
Requires documented notes from each source Starting point: gene cloning description on
assignment paper
Research Paper Rubric
4 3 2 1
Content and Focus
Exceptionally clear, focused, interesting thesis.Strong, rich supporting details and examples that prove thesis.A meaningful conclusion explaining the importance of the research and how it can be used.
Clear thesis which maintains a consistent focus from beginning to end.Specific supporting details are present.A clear conclusion as to why the research is important.
Contains thesis but with inconsistent focus.Generalized supporting details that prove thesis.Conclusion tends to summarize research.
Thesis statement lacks clarity and focus. Inadequate or missing supporting details. Missing a summarizing conclusion
Organization
Strong introduction and conclusion.Consistent and coherent logical progression.Uses clear and skillful transitions.
Clear introduction and conclusion.Illustrates some consistency and shows some logical progression.Uses clear transitions.
Introduction and conclusion is present but not clear Show some attempt of consistency and order. Paper shows attempt of transitions between paragraphs.
Unable to clearly identify introduction and conclusion. Lack of consistency and order. Paper shows little or no attempt of transitions between paragraphs.
Style
Written in formal language (avoids slang completely).Elaborate and colorful language.Consistently strong and varied sentence structure.Direct quotes support student’s ideas.Paper written in student’s own words.
Majority of paper written in formal language.Language appropriate to topic.Words convey intended message.Direct quotes support student’s ideas.Majority of paper written in student’s own words.
Some use of formal language recognized; informal language is dominant.Most language is appropriate to topic.Able to get vague idea of message.Some parts of paper written in student’s own words.
Paper frequently uses informal language. Language is not appropriate to topic. Message is unclear. Majority of paper is plagiarized.
Rubric continued
Sources/Format
Follows MLA guidelines:
Uses 5 or more cited sources.
Sources meet the guidelines for types of sources.
All parenthetical documentation is MLA correct (author’s name, pg. #).
Works Cited page is MLA correct.
All researched info is documented.
Follows MLA Guidelines with few exceptions: 3-4 cited sources used. Sources meet the guidelines for types of sources. Few errors noted in parenthetical documentationMajority of Works Cited page is MLA correct.Most research info is Documented.
Inconsistent use of MLA style guidelines.Less than 3 cited sources used.Majority of parenthetical documentation done incorrectly.Random MLA documentation.Rarely documents sources.
Fails to follow MLA style Guidelines. Less than 3 cited sources used little or no parenthetical documentation. Works Cited page is not understandable.
Conventions
Superior editing. Rarely makes errors in the following areas: Spelling and mechanics.Correct usage and grammar.
Careful editing. Makes few errors in the following areas: Spelling and mechanicsCorrect usage and grammar
Some evidence of editing: Extensive spelling and grammatical errors.
Poor editing: Spelling and grammatical errors make it difficult to read paper.
Lab procedure – 2 copies
By Friday, typed for peer review – use ID number (no name) – Purpose– Hypothesis: prediction of what DNA fragments that you are looking for– Materials– Equipment list– Detailed procedure– Identified controls – Data table
Peer Review
Blind review – no names on papers Purpose: to optimize the lab procedures to
ensure useable results – Provide feedback to another student to improve
her/his lab procedure– Gain perspective on good/poor lab procedures to
revise your lab procedure
Lab work
Shared equipment – Water bath, Gel electrophoresis, etc.
Waiting time: come prepared to work– Lab report – Presentation
Analysis process and conclusions – How did you use your results and research in your
analysis What learned in doing this final project
How rDNA samples are made
How is DNA cloned.ppt