agenda briefly review quiz briefly review worksheet current event intro to enzymes and penny-picker...

29
Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write individual preliminary procedure) Gone Thursday? – must come Thursday morning to turn in your preliminary procedure and take exit slip

Upload: arnold-hodge

Post on 16-Dec-2015

215 views

Category:

Documents


1 download

TRANSCRIPT

Page 1: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Agenda• Briefly review Quiz• Briefly review worksheet• Current Event• Intro to Enzymes and Penny-Picker• Enzyme Catalysis Pre-Lab

• HW: Finish Pre-Lab (write individual preliminary procedure)

• Gone Thursday? – must come Thursday morning to turn in your preliminary procedure and take exit slip

Page 2: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

2.1.I

• 2 pts per question

• Atomic # is• # of protons• What determines the element• If neutral # of protons = # of electrons• NOT necessarily # of neutrons

• Atomic mass is P + N• Atomic Charge is P – e (neutral if P=e)

Page 3: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

2.1.II• 0.5 pts per part

• 19Protons = K = potassium

• Mass = protons + neutrons = 19 + 20 = 39• I didn’t take points off but 39.1 is NOT correct since this atom has

20 neutrons. 39.1 would be the average for all atoms

• 19P, 18e- = charge of 1+

• Explain any of the above for 0.5 or WHY K forms 1+ ion is fine

Page 4: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

2.1.III

• N wants 3 bonds and has 2 lone pairs• N is very electronegative

ee

ee

eee

ee

eee

e

Page 5: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

2.2.I

•Polar (unequal) covalent (sharing)

•Non-polar covalent = equal sharing due to equal electronegativity

• Ionic bonds form between ions• Ions can form when electrons are stripped

Page 6: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

2.2.II

δ- δ+

δ+

δ+

δ+

δ-

δ- δ+

δ+

δ+

δ+

δ-

Page 7: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

2.2.III

• Lots of partial charges All non-polar bonds• Lots of H-bonds No partial charges

No H-bonds

Hydrophilic Hydrophobic

δ-δ-

δ-δ- δ+

δ+δ-

δ+

δ+δ-

Page 8: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

What is Heat?

Page 9: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

ENZYMESProtein Catalysts

Page 10: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Enzymes Are Catalysts

•Not used up in the reaction

•Help chemical reactions occur

Page 11: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

In Chemical Equations

• Sucrose Maltose

• Sucrose + Amylase Maltose + Amylase

Amylase

Page 12: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Enzymes are Proteins

•Bonds with substrates (reactants) in active site

Page 13: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Enzymes Are Specific

•Have complementary structures allowing them to bond with only certain substrates

Page 14: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Realistic Diagram

Page 15: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Enzymes Help Break Bonds

Page 16: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

All Chemical Reactions Involve Breaking Bonds in Reactants

•Allows new bonds to form instead

Page 17: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Enzyme-Substrate Reactions

• Both are molecules just floating around in solution• When they happen to come in contact with each other, they can form temporary bonds

Page 18: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

The Penny-Picker Enzyme

• Function of Penny-Picker:• Pick up pennies and flip them over and move them to a

corner of the desk• No looking! Enzymes have no eyes!• The pennies represent a toxic byproduct of cellular

processes that must be converted to a safer form

• Active site: • Specific to ONE substrate. What’s the substrate?

• Pennies

• Only holds ONE penny at a time

Page 19: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Data Table• On your whiteboard make the following table:

After 10s After 20s After 30s After 40s

Trial 1

Trial 2

Trial 3

Trial 4

Trial 5

Page 20: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Procedure - Trial 1: Baseline• Spread out pennies on table HEADS side up

• Without looking grab pennies and flip them over, putting them in the corner of your table

• One person flips pennies for FOUR 10-second intervals without looking; one person times and counts

• Record data on your whiteboard.

• DO NOT REPLACE THE PENNIES BETWEEN TIME INTERVALS

Page 21: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Procedure - Trial 2: Denaturation• Spread out pennies on table HEADS side up

• Repeat procedure for flipping pennies in four 10-second intervals

• THIS TIME: • Hand used to flip pennies gets taped around all four fingers (partial

denaturation)

• Record data on white board

Page 22: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Procedure - Trial 3: Coenzyme• Spread out pennies on table HEADS side up

• Repeat procedure for flipping pennies in four 10-second intervals

• THIS TIME: • Enzyme has the help of a teammate, representing a coenzyme

• Coenzyme picks up pennies and hands them to enzyme for flipping

• Record data on whiteboard

Page 23: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Co-Enzymes

*No Need to take notes or memorize for quiz – this is just to exemplify importance of enzymes

Page 24: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Procedure - Trial 4: Competitive Inhibitors

• Spread out pennies on table with a mix of HEADS and TAILS up

• TAILS pennies represent competitive inhibitors. Molecules that have a similar shape and bind to the active site, but cannot be broken down.

• Repeat procedure for flipping pennies in four 10-second intervals

• THIS TIME:• If your partner picks up a HEADS penny they flip it and move it to the

corner and you count it

• If your partner picks up a TAILS penny you must stop them and tell them to put it back down

• Record data on whiteboard

Page 25: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Procedure – Trial 5: Non-Competitive Inhibition

• Spread the pennies out as before• Make your hand into a fist• Tape it closed

• This represents an inhibitor that binds to the enzyme and permanently alters its shape

• Try to pick up pennies for each of the 4 intervals

• Fail to pick up pennies and die

Page 26: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Non-Competitive Inhibitors and Venoms

Page 27: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Enzymes Lab

• Will be run next Monday• Today – Prelab, Individually write preliminary procedures (S.P. 0.1)

• Thursday – As a group write one final procedure

• Monday – Conduct experiment

• Goal: Examine how environmental factors affect the rate of an enzyme catalyzed reaction

Page 28: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Pre-Lab

• Discuss each question as a group (except last 2 to be done individually)

• Get approval from Mr. Mahon before proceeding to the next question

Page 29: Agenda Briefly review Quiz Briefly review worksheet Current Event Intro to Enzymes and Penny-Picker Enzyme Catalysis Pre-Lab HW: Finish Pre-Lab (write

Preliminary Procedure

• Will be evaluated for S.P. 0.1• Think about what makes a strong experiment as discussed in unit 1

• While you should all be designing an experiment to assess the same hypothesis – each person’s procedure should be individual

• Thursday you will take the best aspects of each person’s procedure to make your group procedure