boston, massachusetts. usa - chest imaging platform · a chest imaging platform slicer extension...

ParenchymaSubtypeTrainingAChestImagingPlatformSlicerExtensionmodule

AppliedChestImagingLaboratoryBoston,Massachusetts.USA

AppliedChestImagingLaboratory

• Goal:TheParenchymaSubtypeTrainingmoduleisaneasywaytolabeldifferentlungstructures.• Eachfiducialstoresinformationofthetypeandsubtypeofstructureaswellastheregionwhereisplaced,andwhetherthereisornotanartifactontheimage.• Thelistoffiducialscouldbeexportedina.cvs fileeasytomanageforyourstudy.

Overview

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AppliedChestImagingLaboratory

ParenchymaSubtypeTraining

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1- SelectaninputCTimage

AppliedChestImagingLaboratory

ParenchymaSubtypeTraining

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2- SelectthedesiredparenchymaTip:TheParenchymasubtypelistwillchangedependingontheselectedtype.

AppliedChestImagingLaboratory

ParenchymaSubtypeTraining

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3- Ifdesired,selectthesubtypeofparenchyma.Tip:“Any”isselectedbydefault.

AppliedChestImagingLaboratory

ParenchymaSubtypeTraining

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3- Selecttheregionwherethemarkupisgoingtobeplaced.Tip:“Any”isselectedbydefault.

AppliedChestImagingLaboratory

ParenchymaSubtypeTraining

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4- Selectwhetherthereisanartifactontheimageornot.

AppliedChestImagingLaboratory

ParenchymaSubtypeTraining

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5- Placefiducialonanyoftheviews.Tip:makesurethatthefiducialplacerisselected.

AppliedChestImagingLaboratory

ParenchymaSubtypeTraining

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6- selectthePathtosavethemarkup.

7- Savemarkupsona.xmlfile.

Ifdesired,Loadapreviouslysavedfileofmarkups.

Click“removelastfiducial”toremovethelastplacedfiducial.

AppliedChestImagingLaboratory

• TheParenchymalSubtypeTrainingmoduleispartoftheChestImagingPlatformextensionfor3DSlicer(www.chestimagingplatform.org)

• ThisworkisfundedbytheNationalHeart,Lung,AndBloodInstituteoftheNationalInstitutesofHealthunderAwardNumberR01HL116931.ThecontentissolelytheresponsibilityoftheauthorsanddoesnotnecessarilyrepresenttheofficialviewsoftheNationalInstitutesofHealth.

• Contributors:• Raúl SanJoséEstepar• AppliedChestImagingLaboratory• BrighamandWomen'sHospital• HarvardMedicalSchool

ParenchymaSubtypeTraining

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agingPlatform

–ParenchymalAnalysis