table 1 - ars.els-cdn.com€¦ · web viewtable s2. properties of genes and encoded proteins,...

Table S2. Properties of genes and encoded proteins, including homologs and motifs.

  DNA     Protein              Gene Coordinates Strand Length Mass pI Residues Product Homologs & motifs Evalue HHpred Evalue

orf001 301..1458 - 1158 41450 6.9 385 regulator of chromosomal condensation; structural protein

AGC34966 regulator of chromosome condensation RCC1 [Escherichia phage PBECO4]; MS

5.55E-16 3mvd Regulator of chromosome condensation - Drosophila melanogaster

8.70E-13

orf002 1804..2436 - 633 22802 6.3 210 conserved hypothetical protein YP_006383270 hypothetical protein CR3_255 [Cronobacter phage CR3]

3.73E-17    

orf003 3147..3284 + 138 5162 4.1 45 hypothetical protein        orf004 4330..4503 + 174 6582 10.3 57 hypothetical protein        orf005 4583..5257 + 675 24723 5.1 224 hypothetical protein        orf006 5405..5674 + 270 10111   89 conserved hypothetical protein AGC34943 hypothetical protein

[Escherichia phage PBECO4]1.68E-15    

orf007 5797..6189 + 393 15107 4.7 130 hypothetical protein        orf008 6259..6543 + 285 10453 9.8 94 hypothetical protein        orf009 6964..7236 + 273 10090   90 conserved hypothetical protein CBY99655 Phi92_gp226

[Enterobacteria phage phi92]7.28E-27    

orf010 7301..7747 + 447 16859 7.7 148 conserved hypothetical protein YP_006988317 hypothetical protein CcrColossus_gp083 [Caulobacter phage CcrColo ssus]; PB005443 Pfam-B_5443

1.69E-13    

orf011 7824..8279 + 456 17165 6.6 151 hypothetical protein        orf012 8357..8779 + 423 16323 9.2 140 hypothetical protein        orf013 9319..9675 + 357 13923 4.3 118 conserved hypothetical protein YP_004893992 185 gene product

[Salmonella phage PVP-SE1] 9.91E-12    

orf014 9749..10129 + 381 14458 8.9 126 conserved hypothetical protein YP_007006341 hypothetical protein FV3_00170 [Enterobacteria phage vB_EcoM-FV3]

4.20E-15    

orf015 10176..10430 + 255 10030   84 hypothetical protein        orf016 10435..10644 + 210 8072 4.2 69 hypothetical protein        orf017 10934..11167 + 234 8561 5.1 77 hypothetical protein        

orf018 11325..11558 + 234 8904 4.3 77 conserved hypothetical protein YP_007007499 hypothetical protein RaK2_00344 [Enterobacteria phage vB_KleM-RaK2]

7.70E-13    

orf018A 11630..11740 + 111 4212   36 hypothetical protein        orf019 11753..11956 + 204 7557 9.9 67 hypothetical protein        orf020 11956..12132 + 177 6789 4.9 58 hypothetical protein        orf021 12209..12412 + 204 7560 6.2 67 conserved hypothetical protein YP_004957983 unnamed protein

product [Pseudomonas phage OBP] 4.34E-06    

orf022 12491..12793 + 303 11348 8.8 100 hypothetical protein YP_007007494 hypothetical protein RaK2_00339 [Enterobacteria phage vB_KleM-RaK2]

9.43E-06    

orf023 13030..13275 + 246 9014 4.4 81 hypothetical membrane protein 2 transmembrane domains shown using TMHMM 2.0 and Phobius

orf024 13313..13513 + 201 7547 9.0 66 hypothetical protein        orf025 13523..14380 + 858 30839 5.4 285 structural protein AGC36123 hypothetical protein

RHEph10_gp080 [Rhizobium phage RHEph10]; Pfam PF01145.19 Band_7; MS

5.30E-61 3bk6 PH stomatin {Pyrococcus horikoshii}

3.00E-15

orf026 14513..14707 + 195 7941   64 hypothetical protein        orf027 14674..15021 + 348 12972 5.1 115 hypothetical protein        orf028 15034..15321 + 288 10888 9.8 95 hypothetical protein        orf029 15384..15575 + 192 7206 10.1 63 conserved hypothetical protein YP_007007438 hypothetical protein

RaK2_00283 [Enterobacteria phage vB_KleM-RaK2]

5.47E-12    

orf030 15637..16002 + 366 13572 6.6 121 conserved hypothetical protein YP_004894005 198 gene product [Salmonella phage PVP-SE1]

4.16E-07    

orf031 16051..16293 + 243 9555 10.7 80 conserved hypothetical protein YP_007007509 hypothetical protein RaK2_00354 [Enterobacteria phage vB_KleM-RaK2]

1.69E-12    

orf032 16348..16869 + 522 19041 9.4 173 structural protein AGC35003 hypothetical protein [Escherichia phage PBECO4]; MS

2.94E-30    

orf033 16934..17278 + 345 12912 5.4 114 hypothetical protein        orf034 17610..17837 + 228 8619 4.6 75 hypothetical protein        

orf035 18056..18631 + 576 22788 4.7 191 conserved hypothetical protein AGC34954 hypothetical protein [Escherichia phage PBECO4]; PB003131 Pfam-B_3131

4.00E-26    

orf036 18934..19278 + 345 13546   114 hypothetical protein        orf037 19566..19808 + 243 9265 7.8 80 hypothetical protein        orf039 19900..20787 + 888 33696   295 conserved hypothetical protein CAZ15859.1 conserved

hypothetical protein [Xanthomonas albilineans]; PF06067.5 DUF932

orf040 20864..21202 + 339 13443 5.7 112 conserved hypothetical protein YP_006986906 hypothetical protein GAP31_070 [Cronobacter phage vB_CsaM_GAP31]

5.02E-07    

orf041 21466..21687 + 222 8423 5.1 73 hypothetical protein        orf042 21787..22134 + 348 13345 4.7 115 conserved hypothetical protein YP_006986906 hypothetical protein

GAP31_070 [Cronobacter phage vB_CsaM_GAP31]

1.04E-09    

orf043 22337..22531 + 195 7278 4.6 64 hypothetical protein        orf044 22592..22768 + 177 6496 4.5 58 conserved hypothetical protein YP_007007504 hypothetical protein

RaK2_00349 [Enterobacteria phage vB_KleM-RaK2]

1.38E-10    

orf045 23183..23533 + 351 12985 5.0 116 hypothetical protein        orf046 23773..24042 + 270 10388 4.5 89 hypothetical protein        orf047 24113..24406 + 294 11078 4.4 97 conserved hypothetical protein AGR48524 hypothetical protein

JH2_128 [Escherichia phage JH2]4.41E-06    

orf047A 24488..24688 + 201 7142 9.7 66 conserved hypothetical protein YP_007007565 hypothetical protein RaK2_00410 [Enterobacteria phage vB_KleM-RaK2]

1.90E-05    

orf048 24917..25498 + 582 23449 4.8 193 hypothetical protein        orf049 25499..26122 + 624 23834 5.2 207 hypothetical protein        orf050 26100..26672 + 573 22231 5.7 190 hypothetical protein        orf051 26674..27291 + 618 24452 4.6 205 hypothetical protein        orf052 27413..28009 + 597 22833 5.7 198 hypothetical protein        orf053 28006..28509 + 504 20023 9.2 167 hypothetical protein        orf054 28521..29072 + 552 21740 5.2 183 hypothetical protein        

orf055 29069..29497 + 429 16525 5.5 142 conserved hypothetical protein YP_007007590 hypothetical protein RaK2_00435 [Enterobacteria phage vB_KleM-RaK2]

9.09E-34    

orf056 29475..30011 + 537 21106   178 hypothetical protein        orf057 30004..30447 + 444 17080 5.0 147 conserved hypothetical protein AGC34838 hypothetical protein

[Escherichia phage PBECO4]9.25E-21    

orf058 30527..31003 + 477 18315 4.8 158 conserved hypothetical protein AGC34835 hypothetical protein [Escherichia phage PBECO4]

1.06E-56    

orf059 31007..31177 + 171 6382   56 conserved hypothetical protein NP_944222 hypothetical protein Aeh1p344 [Aeromonas phage Aeh1]

1.15E-05    

orf060 31181..32068 + 888 35485 8.4 295 hypothetical protein        orf061 32052..32372 + 321 12758 5.3 106 hypothetical protein        orf062 32416..32811 + 396 14706 5.1 131 conserved hypothetical protein AGC34832 hypothetical protein

[Escherichia phage PBECO4]1.37E-38    

orf063 32834..33184 + 351 13439 4.6 116 conserved hypothetical protein AGC34831 hypothetical protein [Escherichia phage PBECO4]

8.73E-27    

orf064 33227..33553 + 327 12956 8.6 108 hypothetical membrane protein 2 transmembrane domains shown using TMHMM 2.0 and Phobius

orf065 33550..34308 + 759 29418   252 hypothetical protein        orf066 34308..35090 + 783 30513 4.8 260 hypothetical protein        orf067 35805..36329 + 525 21026 5.5 174 conserved hypothetical protein YP_007007601 hypothetical protein

RaK2_00446 [Enterobacteria phage vB_KleM-RaK2]

2.14E-24    

orf068 36342..36884 + 543 20685 5.5 180 DNA N-6-adenine-methyltransferase

YP_007007602 methylase [Enterobacteria phage vB_KleM-RaK2]; PF05869.5 Dam

7.70E-45    

orf069 36888..37445 + 558 21173 5.6 185 cytitidyltransferase YP_007007603 putative cytitidyltransferase [Enterobacteria phage vB_KleM-RaK2]

1.80E-36 1o6b Phosphopant-etheine adenylyltransferase {Bacillus subtilis}

2.00E-14

orf070 37429..37710 + 282 10718 4.6 93 conserved hypothetical protein AGC34826 hypothetical protein [Escherichia phage PBECO4]

1.21E-16    

orf071 37755..38330 + 576 22368 4.1 191 conserved hypothetical protein YP_007007606 hypothetical protein RaK2_00451 [Enterobacteria phage vB_KleM-RaK2]

1.41E-19    

orf072 38314..38463 + 150 5796 4.7 49 hypothetical protein        orf073 38444..38593 + 150 5772 9.8 49 hypothetical protein        orf074 38593..39237 + 645 24903 5.6 214 conserved hypothetical protein YP_007007612 hypothetical protein

RaK2_00457 [Enterobacteria phage vB_KleM-RaK2]; SpoT[COG0317], Guanosine polyphosphate pyrophosphohydrolases/synthetases

4.09E-93 1vj7 Bifunctional RELA/SPOT {Streptococcus dysgalactiae subsp}

1.30E-10

orf075 39239..39457 + 219 7992 7.8 72 hypothetical membrane protein 2 transmembrane domains shown using TMHMM 2.0 and Phobius

orf076 39438..40535 + 1098 41930 4.8 365 conserved hypothetical protein YP_007675886 hypothetical protein VPIG_00026 [Vibrio phage PWH3a-P1]

2.00E-29    

orf077 40577..41308 + 732 28155 4.9 243 conserved hypothetical protein AGC34815 hypothetical protein [Escherichia phage PBECO4]

5.47E-115    

orf078 41351..41644 + 294 11023 4.8 97 hypothetical protein        orf079 41641..41937 + 297 11509 5.7 98 hypothetical protein        orf080 42001..43152 + 1152 44144 5.5 383 RnlA RNA ligase 1 and tail fiber

attachment catalystYP_007007619 RNA ligase [Enterobacteria phage vB_KleM-RaK2]; PF09511.4 RNA_lig_T4_1

4.07E-156 2c5u RNA ligase, T4 RNA ligase 1 {Bacteriophage T4}

1.80E-46

orf081 43182..43418 + 237 9238 10.4 78 conserved hypothetical protein AGC34808 hypothetical protein [Escherichia phage PBECO4]

3.30E-15    

orf082 43411..43635 + 225 8591 5.1 74 hypothetical protein        orf083 43648..43872 + 225 8544 8.8 74 conserved hypothetical protein AGC34807 hypothetical protein

[Escherichia phage PBECO4]7.07E-30    

orf084 43860..44783 + 924 35456 6.3 307 PseT polynucleotide 5'-kinase and 3'-phosphatase

YP_007007625 polynucleotide 5'-kinase and 3'-phosphatase [Enterobacteria phage vB_KleM-RaK2]; PF06414.6 Zeta_toxin

1.23E-128 Polynucleotide kinase {Enterobacteria phage T4}

1.40E-28

orf085 44840..45049 + 210 7881 4.8 69 hypothetical protein        orf086 45042..45245 + 204 8073 4.5 67 hypothetical protein        orf087 45249..45416 + 168 6381 8.0 55 hypothetical membrane protein 1-2 transmembrane domains

shown using TMHMM 2.0 and Phobius

orf088 45406..45687 + 282 11243 3.9 93 hypothetical protein        orf089 45684..46022 + 339 13003 3.9 112 hypothetical protein        orf090 46024..46251 + 228 8337   75 hypothetical membrane protein 2 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf091 46232..46480 + 249 9599 4.3 82 conserved hypothetical protein CBY99473 Phi92_gp045 [Enterobacteria phage phi92]

1.84E-07    

orf092 46477..46833 + 357 14195 5.3 118 conserved hypothetical protein YP_007010248 hypothetical protein CC2_222 [Aeromonas phage CC2]

1.80E-08    

orf093 46833..47078 + 246 9812 3.9 81 conserved hypothetical protein YP_003934753 hypothetical protein SP18_gp128 [Shigella phage SP18]

2.64E-08    

orf094 47123..47764 + 642 24796 4.6 213 conserved hypothetical protein YP_006986416 hypothetical protein GAP161_137 [Cronobacter phage vB_CsaM_GAP161 ]

1.02E-19    

orf095 47764..48543 + 780 29950 5.0 259 putative serine/threonine protein phosphatase

AGC34794 putative serine/threonine protein phosphatase [Escherichia phage PBEC O 4]; PF00149.22 Metallophos

3.23E-61 1g5b Serine/threonine protein phosphatase {Enterobacteria phage lambda}

1.20E-25

orf096 48543..48848 + 306 11699 4.9 101 hypothetical protein        orf097 48848..49306 + 459 17263 5.4 152 conserved hypothetical protein AGC34791 hypothetical protein

[Escherichia phage PBECO4]4.88E-15    

orf098 49317..50537 + 1221 47342 6.3 406 conserved hypothetical protein AGC34790 hypothetical protein [Escherichia phage PBECO4]

1.46E-40    

orf099 50563..51978 + 1416 53040 5.1 471 DNA ligase AGC34789 DNA ligase [Escherichia 0 1a0i DNA 2.20E-

phage PBECO4]; PF01068.1 DNA_ligase_A_M

ligase {Enterobacteria phage T7}

24

orf100 51975..52397 + 423 16657 5.2 140 hypothetical protein        orf101 52375..53166 + 792 30701 5.8 263 metallophosphoesterase AGC34788 Ser/Thr protein

phosphatase family protein [Escherichia phage PBECO4]; PF12850.1 Metallophos_2

3.15E-91 3rl5 Metallophosphoesterase mpped2 {Rattus norvegicus}

1.00E-16

orf102 53168..53608 + 441 14893 4.5 146 conserved hypothetical protein NP_899386 hypothetical protein KVP40.0139 [Vibrio phage KVP40]

8.99E-12    

orf103 53610..54302 + 693 25559   230 ATP-dependent Clp protease proteolytic subunit

YP_007007644 putative ATP-dependent Clp protease proteolytic subunit [Enteroba cteria phage vB_KleM-RaK2]; PF00574.17 CLP_protease

5.97E-116 3p2l ATP-dependent CLP protease proteolytic subunit {Francisella tularensis subsp}

1.20E-27

orf104 54319..54606 + 288 10457 4.5 95 conserved hypothetical protein YP_007007645 hypothetical protein RaK2_00490 [Enterobacteria phage vB_KleM-RaK2]

1.24E-15    

orf105 54611..55069 + 459 17825 8.7 152 conserved hypothetical protein AGC34783 hypothetical protein [Escherichia phage PBECO4]

2.84E-48    

orf106 55114..55677 + 564 22739 5.1 187 hypothetical protein        orf107 55662..56189 + 528 20768 5.6 175 hypothetical protein        orf108 56179..56673 + 495 19833 5.9 164 conserved hypothetical protein AGC34780 hypothetical protein

[Escherichia phage PBECO4]3.33E-05    

orf109 56630..57103 + 474 17590 6.0 157 CMP/dCMP deaminase YP_007007650 dCMP deaminase [Enterobacteria phage vB_KleM-RaK2]; PF00383.1 dCMP_cyt_deam_1

1.29E-80 1vq2 DCMP deaminase, deoxycytidylate deaminase {Enterobacteria phage T4}

1.80E-31

orf110 57107..57373 + 267 10220 9.7 88 hypothetical protein        orf111 57416..58327 - 912 30181 9.1 303 major tail protein YP_007007651 putative structural

protein [Enterobacteria phage vB_KleM-RaK2]; PF02368.12 Big_2; MS

2.85E-37 2l04 Major tail protein V {Enterobacteria phage lambda}

3.20E-17

orf112 58569..59666 + 1098 42296 6.2 365 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase

YP_007007653 hypothetical protein RaK2_00498 [Enterobacteria phage vB_KleM-RaK2]; PF01467.1 CTP_transf_2 & PF00293.1 NUDIX

8.88E-155 1ej2 Nicotinamide mononucleotide adenylyltransferase {Methanothermobacter thermautotrophicus}

6.20E-11

orf113 59713..60228 + 516 19816 4.4 171 hypothetical protein        orf114 60288..61775 + 1488 55580 5.9 495 nicotinamide

phosphoribosyltransferase YP_007007655 hypothetical protein RaK2_00500 [Enterobacteria phage vB_KleM-RaK2]; PB002198 Pfam-B_2198 & PF04095.10 NAPRTase

0 1vlp Naprtase, nicotinate phosphoribosyltransferase {Saccharomyces cerevisiae}

6.70E-34

orf115 61818..62030 + 213 7945 7.8 70 hypothetical membrane protein 2 transmembrane domains shown using TMHMM 2.0 and Phobius

orf116 62017..62955 + 939 36914 4.6 312 conserved hypothetical protein YP_008125461 hypothetical protein VPFG_00314 [Vibrio phage nt-1]

3.03E-10    

orf117 62958..63158 + 201 7584 9.5 66 hypothetical membrane protein 2 transmembrane domains shown using TMHMM 2.0 and Phobius

orf118 63166..63612 + 447 16654 5.5 148 structural protein YP_004957968 unnamed protein product [Pseudomonas phage OBP]; MS

3.30E-23    

orf118A 63625..63861 + 237 9030 8.6 78 conserved hypothetical protein YP_007006360 hypothetical protein FV3_00189 [Enterobacteria phage vB_EcoM-FV3]

1.03E-19    

orf119 63858..64655 + 798 29889 4.8 265 putative Sir2-like protein AGC34775 putative Sir2-like protein [Escherichia phage PBECO4];

1.87E-66 1s5p NAD-dependent

2.20E-26

PF02146.1 SIR2 deacetylase {Escherichia coli}

orf120 64655..65560 + 906 34711   301 nudix hydrolase YP_007007658 nudix hydrolase [Enterobacteria phage vB_KleM-RaK2]; PF00293.1 NUDIX & PB001179 Pfam-B_1179

3.12E-57 3kvh Protein syndesmos {Homo sapiens}

6.70E-10

orf121 65560..65862 + 303 11115 6.0 100 hypothetical protein AGC34772 hypothetical protein [Escherichia phage PBECO4]

1.66E-23    

orf122 65933..67375 + 1443 53726 4.9 480 PhoH family protein YP_007007661 hypothetical protein RaK2_00506 [Enterobacteria phage vB_KleM-RaK2]; PF02562.10 PhoH

0 3b85 Phosphate starvation-inducible protein {Corynebact-erium glutamicum atcc 13032}

2.90E-13

orf123 67423..67605 + 183 6983 6.1 60 hypothetical protein        orf124 67776..68474 + 699 27438 5.9 232 hypothetical protein     1wot Putative

minimal nucleotidyltransferase {Thermus thermophilus}

3.50E-03

orf124A 68471..68677 + 207 7450 6.5 68 hypothetical membrane protein 2 transmembrane domains shown using TMHMM 2.0 and Phobius

orf125 68684..68833 + 150 5628 5.0 49 hypothetical membrane protein 1 transmembrane domains shown using TMHMM 2.0 and Phobius

orf126 68908..69450 + 543 22174 9.4 180 hypothetical protein AGC34769 hypothetical protein [Escherichia phage PBECO4]

4.40E-28    

orf127 69476..70288 + 813 31073 4.5 270 conserved hypothetical protein YP_007007665 hypothetical protein RaK2_00510 [Enterobacteria phage vB_KleM-RaK2]

3.59E-35    

orf128 70351..72372 + 2022 74299 5.8 673 colanic acid-degrading protein YP_007348361 putative tail fiber 9.15E-140 1rmg Rgase A, 2.10E-

protein [Cronobacter phage vB_CskP_GAP227]; PB001187 Pfam-B_1187

rhamnogalact-uronase A {Aspergillus aculeatus}

03

orf129 72427..73041 + 615 22579 4.9 204 conserved hypothetical protein YP_007235865 hypothetical protein [Yersinia phage phiR1-RT] ; PB000661 Pfam-B_661

2.13E-40 1t1j Hypothetical protein; structural genomics {Pseudomonas aeruginosa}

8.30E-06

orf130 73041..73322 + 282 10250   93 co-chaperonin GroES YP_002152263 10 Kda chaperonin [Proteus mirabilis HI4320]; PF00166.15 Cpn10 & groES[PRK00364], co-chaperonin GroES

5.00E-59 1g31 chaperone, CO-chaperonin {Enterobacteria phage T4}

8.10E-12

orf131 73332..74594 + 1263 47439 5.1 420 tyrosyl-tRNA synthetase WP_021706075 tyrosine--tRNA ligase [Vibrio proteolyticus]; PF00579.19 tRNA-synt_1b & PF01479.19 S4 & PRK05912[PRK05912], tyrosyl-tRNA synthetase

3.00E-116 2yxn Tyrosyl-tRNA synthetase {Escherichia coli str}

6.30E-60

orf132 74596..74802 + 207 7812   68 hypothetical protein        orf133 74950..75591 + 642 25454 4.5 213 conserved hypothetical protein AGC34761 hypothetical protein

[Escherichia phage PBECO4]3.52E-32    

orf134 75587..75946 + 360 13520 9.6 119 Cd dCMP deaminase AGC34760 hypothetical protein [Escherichia phage PBECO4]; PF00383.1 dCMP_cyt_deam_1

5.65E-39 1vq2 DCMP deaminase, deoxycytidylate deaminase {Enterobacteria phage T4}

1.80E-03

orf135 75999..76193 + 195 7559 8.0 64 hypothetical protein        orf136 76193..76744 + 552 21268 5.0 183 putative deoxyguanosine kinase AEO93552 gp293 [Bacillus phage

G]; PB002350 Pfam-B_2350 & PB000221 Pfam-B_221

1.01E-07 2jaq Deoxyguanos-ine kinase {Mycoplasma

1.10E-07

mycoides subsp}

orf137 76754..77044 + 291 11205 5.3 96 hypothetical protein        orf138 77166..78968 + 1803 68063 5.7 600 NrdD anaerobic NTP reductase

large subunitYP_004893948 142 gene product [Salmonella phage PVP-SE1]; PF01228.15 Gly_radical

0 1h7b Anaerobic ribonucleotide-triphosphate reductase large chain {Bacteriophage T4}

3.90E-121

orf139 78978..79421 + 444 17749 4.7 147 hypothetical protein        orf140 79440..80183 + 744 27972 4.8 247 putative DNA methyltransferase YP_003579901 hypothetical protein

KP-KP15_gp027 [Klebsiella phage KP15] & YP_007348668.1| hypothetical protein KP27_035 [Klebsiella phage KP27 ]

2.40E-82 2ih2 Modification methylase TAQI; DNA, DNA methyltransferase {Thermus aquaticus}

4.20E-11

orf141 80180..80653 + 474 17829 5.1 157 anaerobic ribonucleoside-triphosphate reductase activating protein

AGC34754 anaerobic nucleotide reductase subunit [Escherichia phage PBECO4]

6.66E-79 3c8f Pyruvate formate-lyase 1-activating enzyme {Escherichia coli}

8.40E-10

orf142 80646..80822 + 177 6651 3.8 58 hypothetical protein        orf143 80900..83608 + 2709 98358 6.0 902 conserved hypothetical protein AGC34753 hypothetical protein

[Escherichia phage PBECO4]0    

orf144 83618..86356 + 2739 99595 5.5 912 putative structural protein AGC34751 hypothetical protein [Escherichia phage PBECO4]; 1 transmembrane domains shown using TMHMM 2.0 and Phobius; MS

5.46E-09    

orf145 86368..89118 + 2751 99719 5.7 916 structural protein AGC34751 hypothetical protein [Escherichia phage PBECO4]; MS

0    

orf146 89248..89820 + 573 22318 7.1 190 hypothetical protein        

orf147 89821..90600 + 780 29856 7.6 259 putative tRNAHis guanylyltransferase

YP_006988534 putative tRNA-His guanylyltransferase protein [Caulobacter phage CcrColossus]; COG4021, Uncharacterized conserved protein & Thg1[pfam04446], tRNAHis guanylyltransferase; PF04446.6 Thg1

4.51E-69 3otd tRNA(His) guanylyltransferase {Homo sapiens}

7.90E-39

orf148 90566..91075 + 510 19919   169 hypothetical protein        orf149 91075..91377 + 303 11277 5.2 100 NrdA.1 conserved hypothetical

proteinYP_007007677 hypothetical protein Rak2_00522 [Enterobacteria phage vB_KleM-RaK2]; PB002144 Pfam-B_2144

1.01E-23    

orf150 91384..91863 + 480 18514 9.2 159 hypothetical protein        orf151 91860..92480 + 621 24504 8.6 206 hypothetical protein        orf152 92489..93349 + 861 33159 5.3 286 putative N-4 cytosine-specific

methyltransferaseYP_008241208 DNA methylase [Cellulophaga phage phi18:3]; PF01555.12 N6_N4_Mtase

1.74E-86 1boo Protein (N-4 cytosine-specific methyltransferase PVU II) {Proteus vulgaris}

2.50E-31

orf153 93346..93627 + 282 10698 5.1 93 hypothetical protein        orf154 93636..94877 + 1242 48691 5.6 413 conserved hypothetical protein AGC34746 hypothetical protein

[Escherichia phage PBECO4]; PF10127.3 Nuc-transf

5.61E-176    

orf155 94879..95292 + 414 15972 4.2 137 conserved hypothetical protein YP_007007162 hypothetical protein RaK2_00007 [Enterobacteria phage vB_KleM-RaK2]

4.00E-09    

orf156 95296..95802 + 507 19299 4.1 168 conserved hypothetical protein YP_007007161 hypothetical protein RaK2_00006 [Enterobacteria phage vB_KleM-RaK2]

1.32E-06    

orf157 95804..96280 + 477 18476 4.3 158 conserved hypothetical protein YP_007007162 hypothetical protein RaK2_00007 [Enterobacteria phage vB_KleM-RaK2]

2.12E-12    

orf158 96264..96839 + 576 21669 5.3 191 conserved hypothetical protein YP_007007163 hypothetical protein RaK2_00008 [Enterobacteria phage vB_KleM-RaK2]

2.08E-72    

orf159 96973..97227 + 255     138 acyl carrier protein YP_007877402 acyl carrier protein [Vibrio phage helene 12B3]; PF00550.19 PP-binding

1.08E-07 2cgq Acyl carrier protein ACPA {Mycobact-erium tuberculosis}

4.20E-08

orf160 97303..97680 + 378 14447 9.3 125 conserved hypothetical membrane protein

YP_007007165 hypothetical protein RaK2_00010 [Enterobacteria phage vB_KleM-RaK2]; 1 transmembrane domains shown using TMHMM 2.0 and Phobius

8.14E-14    

orf161 97682..97978 + 297 11137 5.5 98 conserved hypothetical protein AGC34740 hypothetical protein [Escherichia phage PBECO4]

1.30E-16    

orf162 98053..98442 + 390 15417 5.4 129 conserved hypothetical protein YP_007007168 hypothetical protein RaK2_00013 [Enterobacteria phage vB_KleM-RaK2]

1.40E-03    

orf163 98453..98710 + 258 10299 4.3 85 conserved hypothetical protein YP_007349285 hypothetical protein [Bacillus phage phiAGATE]

2.16E-11    

orf164 99365..99736 + 372 14752 5.9 123 hypothetical protein        orf165 99770..100210 + 441 17239 4.5 146 MobD.6 conserved hypothetical

proteinAGC34735 hypothetical protein [Escherichia phage PBECO4]; PB014259 Pfam-B_14259

7.62E-55 2xgw Peroxide resistance protein; metal binding protein {Streptococcus pyogenes}

6.00E-04

orf166 100255..100785 + 531 20633 4.0 176 conserved hypothetical protein YP_007348441 hypothetical protein phAPEC8_0073 [Escherichia phage phAPEC8]

9.80E-07    

orf167 100823..101257 + 435 17250 3.9 144 conserved hypothetical protein ADX88230 hypothetical protein TUST1-191_00920 [Vibrio phage ICP1_2006_D] & ADX88457.1| hypothetical protein TUST1-

2.84E-11    

182_00920 [Vibrio phage ICP1_ 2006_C] & ADX89594.1| hypothetical protein TUST1-10_00910 [Vibrio phage ICP1_2004_A]

orf168 101241..101528 + 288 11103 4.4 95 hypothetical protein        orf169 101534..101833 + 300 11527 9.8 99 conserved hypothetical protein YP_007007174 hypothetical protein

RaK2_00019 [Enterobacteria phage vB_KleM-RaK2]

6.28E-10    

orf170 101847..102416 + 570 21423 5.1 189 thymidine kinase YP_007007176 thymidine kinase [Enterobacteria phage vB_KleM-RaK2]; PF00265.12 TK

3.41E-75 1w4r Thymidine kinase; type II {Homo sapiens}

1.00E-46

orf171 102473..102979 + 507 19695 9.1 168 hypothetical membrane protein 1 transmembrane domains shown using TMHMM 2.0 and Phobius

orf172 102976..103557 + 582 22149 7.2 193 hypothetical membrane protein 1 transmembrane domains shown using TMHMM 2.0 and Phobius

orf173 103554..103913 + 360 13685 6.3 119 conserved hypothetical protein AGC34724 hypothetical protein [Escherichia phage PBECO4]

3.93E-33    

orf174 103916..104491 + 576 22422 4.9 191 hypothetical protein        orf175 104503..105768 + 1266 47841 4.9 421 RNA ligase YP_238935 hypothetical protein

PHG31p206 [Aeromonas phage 31]; PHA02142, putative RNA ligase & RNA_ligase[pfam09414], RNA ligase

5.41E-105 1s68 RNA ligase 2 {Enterobacteria phage T4}

5.80E-15

orf176 105937..107451 + 1515 55693 9.1 504 conserved hypothetical protein AFN37532 hypothetical protein pp2_299 [Vibriophage phi-pp2]; PF11443.2 DUF2828

1.82E-119 1yvr RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa {Xenopus laevis}

4.10E-24

orf177 107502..107642 + 141 5021   46 hypothetical membrane protein 1 transmembrane domains shown using TMHMM 2.0 and Phobius

orf178 107696..108118 + 423 17245 8.4 140 conserved hypothetical protein AGC34721 hypothetical protein [Escherichia phage PBECO4]

8.21E-39    

orf179 108111..108686 + 576 21849 5.2 191 hypothetical protein        orf180 108801..109733 + 933 35328 9.3 310 lysozyme AGC34720 putative lysozyme

[Escherichia phage PBECO4]; bacteriophage_T4-like_lysozyme[cd00735]; 1 transmembrane domains shown using TMHMM 2.0 and Phobius

3.38E-102 1swy Lysozyme; RB+ binding sites {Enterobacteria phage T4}

4.30E-15

orf181 109751..110122 + 372 14828 9.7 123 conserved hypothetical protein YP_007392863 hypothetical protein [Klebsiella phage JD001]

2.72E-14    

orf182 110119..110364 + 246 9354 7.8 81 conserved hypothetical protein YP_007002527 hypothetical protein PJG4_001 [Pseudomonas phage JG004]

4.55E-06    

orf183 110382..110717 + 336 12806 5.1 111 sigma 54 modulation protein WP_017413493 hypothetical protein [Clostridium tunisiense]; PF02482.13 Ribosomal_S30AE & RaiA[cd00552], RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY

7.00E-06 2rql Probable sigma-54 modulation protein {Escherichia coli}

3.80E-11

orf184 110801..111196 + 396 15606 5.2 131 hypothetical protein        orf185 111183..111392 + 210 8287   69 hypothetical protein        orf186 111395..112510 + 1116 42839   371 multifunctional tRNA nucleotidyl

transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase

YP_007007186 hypothetical protein RaK2_00031 [Enterobacteria phage vB_KleM-RaK2]; PF01743.14 PolyA_pol & PF12627.1 PolyA_pol_RNAbd

1.18E-163 3h38 tRNA nucleotidyl transferase-related protein {Thermotoga maritima}

5.20E-37

orf187 112578..113006 + 429 16587 4.7 142 NudE nudix hydrolase AGC34712 nudix hydrolase [Escherichia phage PBECO4]

1.21E-61 2kdv RNA pyrophospho-hydrolase; nudix family {Escherichia coli}

7.00E-14

orf188 113032..113268 + 237 8714 4.5 78 glutaredoxin YP_007007188 hypothetical protein 7.71E-25 1ego 3.10E-

RaK2_00033 [Enterobacteria phage vB_KleM-RaK2]; PF00462.18 Glutaredoxin

Glutaredoxin; electron transport; NMR {Escherichia coli}

14

orf189 113270..113683 + 414 15194 4.9 137 conserved hypothetical protein YP_006440164 hypothetical protein Turpa_2012 [Turneriella parva DSM 21527]; PF09424.4 YqeY

2.00E-07 1zq1 Glutamyl-tRNA(Gln) amidotransfer-ase subunit E {Pyrococcus abyssi}

9.40E-03

orf190 113685..114029 + 345 13358 5.5 114 hypothetical protein        orf191 114077..114319 + 243 9311   80 conserved hypothetical protein AGC34709 hypothetical protein

[Escherichia phage PBECO4]1.82E-36    

orf192 114364..114861 + 498 18500 5.4 165 conserved hypothetical protein AGC34708 hypothetical protein [Escherichia phage PBECO4]; PF01661.15 Macro

4.66E-58 3gpg NSP3, non-structural protein 3 {Chikungunya virus}

2.00E-09

orf193 114888..115214 + 327 11876 4.5 108 conserved hypothetical protein YP_007007191 hypothetical protein RaK2_00036 [Enterobacteria phage vB_KleM-RaK2]

6.04E-31    

orf194 115218..115580 + 363 13561   120 conserved hypothetical protein YP_007007192 hypothetical protein RaK2_00037 [Enterobacteria phage vB_KleM-RaK2]

4.05E-12    

orf195 115629..116414 + 786 29634 5.3 261 neck protein AGC34705 hypothetical protein [Escherichia phage PBECO4]; PB009499 Pfam-B_9499

1.77E-131    

orf196 116453..116704 + 252 9639 3.8 83 hypothetical protein        orf197 116743..117429 + 687 26437 5.0 228 putative deoxynucleoside

monophosphate kinaseAGC34703 putative deoxynucleoside monophosphate kinase [Escherichia phage PBEC O 4]

2.59E-88 1dek Deoxynucleo-side monophos-phate kinase; phosphor-

2.40E-26

transferase; {Enterobacteria phage T4}

orf198 117516..120167 + 2652 95643 4.7 883 tail sheath monomer AGC34702 tail sheath protein [Escherichia phage PBECO4]; PF04984.8 Phage_sheath_1; MS

0 3j2m_U Tail sheath protein GP18; bacteriophage T4, phage tail terminator protein

1.10E-51

orf199 120275..120964 + 690 25392 4.7 229 putative structural protein AGC34701 hypothetical protein [Escherichia phage PBECO4]; MS

1.66E-128    

orf200 121045..121821 + 777 29095 5.2 258 structural protein YP_007007198 hypothetical protein RaK2_00043 [Enterobacteria phage vB_KleM-RaK2]; MS

9.34E-123    

orf201 121832..122926 + 1095 39841 5.0 364 conserved hypothetical protein AGC34699 hypothetical protein [Escherichia phage PBECO4]

2.68E-176    

orf202 122926..123384 + 459 17733 9.5 152 head completion protein AGC34698 head completion protein [Escherichia phage PBECO4]; PB000562 Pfam-B_562 & PF08722.5 Tn7_Tnp_TnsA_N

2.96E-61    

orf203 123386..123955 + 570 21751 4.7 189 conserved hypothetical protein AGC34697 hypothetical protein [Escherichia phage PBECO4]

1.05E-69    

orf204 123983..124528 + 546 20976 4.7 181 conserved hypothetical protein YP_007007202 hypothetical protein RaK2_00047 [Enterobacteria phage vB_KleM-RaK2]

3.58E-62    

orf205 124531..125106 + 576 20760 5.0 191 conserved hypothetical protein AGC34695 hypothetical protein [Escherichia phage PBECO4]

7.14E-62    

orf206 125119..126540 + 1422 52727 5.2 473 conserved hypothetical protein AGC34694 hypothetical protein [Escherichia phage PBECO4]

1.53E-64    

orf207 126558..127514 + 957 34322 3.8 318 conserved hypothetical protein AGC34693 hypothetical protein [Escherichia phage PBECO4]

8.11E-71    

orf208 127514..127918 + 405 14719 3.7 134 conserved hypothetical protein AGC34692 hypothetical protein [Escherichia phage PBECO4]

1.40E-11    

orf209 127922..128296 + 375 14303 4.9 124 conserved hypothetical protein AGC34691 hypothetical protein [Escherichia phage PBECO4]

8.71E-48    

orf210 128437..129780 + 1344 50484 5.2 447 ATPase AGC34690 ATPase [Escherichia phage PBECO4]; PB003814 Pfam-B_3814

0 2xsz RUVB-like 2; hydrolase {Homo sapiens}

2.60E-06

orf211 129823..131178 + 1356 51071 5.1 451 conserved hypothetical protein AGC34689 putative HNH endonuclease [Escherichia phage PBECO4]; PF09967.3 DUF2201 & PB015028 Pfam-B_15028

1.09E-179 1ijb Von Willebrand factor; dinucleotide-binding fold, blood clotting; {Homo sapiens}

1.50E-06

orf212 131286..131522 + 237 8607   78 conserved hypothetical protein YP_007007210 hypothetical protein RaK2_00055 [Enterobacteria phage vB_KleM-RaK2]

1.85E-11    

orf213 131524..132210 + 687 25914 5.2 228 conserved hypothetical protein AGC34687 hypothetical protein [Escherichia phage PBECO4]

7.74E-84    

orf214 132210..132518 + 309 11588 4.9 102 conserved hypothetical protein YP_007007212 hypothetical protein RaK2_00057 [Enterobacteria phage vB_KleM-RaK2]

4.99E-41    

orf215 132505..133092 + 588 22242 5.8 195 conserved hypothetical protein AGC34686 hypothetical protein [Escherichia phage PBECO4]; PB014196 Pfam-B_14196

9.99E-64    

orf216 133099..133452 + 354 13652 4.5 117 hypothetical protein        orf217 133415..134344 + 930 35302 5.2 309 thymidylate synthase AGC34685 dTMP thymidylate

synthase [Escherichia phage PBECO4]; PF00303.13 Thymidylat_synt

2.52E-166 1tis Thymidylate synthase; transferase(methyltransferase); {Enterobacteria phage T4}

5.50E-82

orf218 134375..136312 - 1938 68385 4.9 645 structural protein AGC34684 hypothetical protein [Escherichia phage PBECO4]; MS

0    

orf219 136401..137039 - 639 24157 4.6 212 structural protein AGC34682 hypothetical protein [Escherichia phage PBECO4]; PB014973 Pfam-B_14973; MS

3.70E-06    

orf220 137053..141726 - 4674 154065 4.2 1557 structural protein; putative coliphage T4 gp34 long tail fiber, proximal subunit homolog

AGC34681 YadA domain protein [Escherichia phage PBECO4]; MS

4.73E-76    

orf221 141861..142724 - 864 30144 4.6 287 structural protein AGC35228 hypothetical protein [Escherichia phage PBECO4]; MS

1.28E-99    

orf222 142803..143942 - 1140 41425 4.2 379 structural protein AGC35226 hypothetical protein [Escherichia phage PBECO4]; MS

7.28E-139    

orf223 144104..144544 + 441 16657   146 structural protein AGC35225 hypothetical protein [Escherichia phage PBECO4]; MS

2.81E-73    

orf224 144555..145163 + 609 21770 5.3 202 structural protein AGC35224 hypothetical protein [Escherichia phage PBECO4]; MS

1.34E-117    

orf225 145174..146283 + 1110 40647 4.9 369 structural protein AGC35223 hypothetical protein [Escherichia phage PBECO4]; MS

2.84E-159    

orf226 146285..146752 - 468 17735 4.7 155 MutT/NUDIX hydrolase family protein

AGC35222 putative MutT/NUDIX hydrolase family protein [Escherichia phage PBECO4]; PF00293.1 NUDIX

4.09E-77 2yvp NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose {Thermus thermophilus}

1.80E-10

orf227 146763..148100 - 1338 51312 4.8 445 tail sheath stabilizer and completion protein; coliphage T4 gp15 homolog

AGC35221 hypothetical protein [Escherichia phage PBECO4]; PB006635 Pfam-B_6635

0 4hud_A Tail connector protein GP15; bacteriophage T4

1.50E-60

orf228 148097..149593 - 1497 57329 4.6 498 putative structural protein AGC35220 hypothetical protein [Escherichia phage PBECO4]; MS

0    

orf229 149699..151993 + 2295 84483 4.9 764 ATP-dependent Clp protease, ATP-binding subunit clpA

YP_007007224 hypothetical protein RaK2_00069 [Enterobacteria phage vB_KleM-RaK2] ; PB001281 Pfam-B_1281 & PF00004.23 AAA & PF07724.8 AAA_2 & PF10431.3 ClpB_D2-small; MS

0 1jbk CLPB protein {Escherichia coli}

4.80E-25

orf230 152032..162057 - 10026 381192 4.7 3341 putative structural protein YP_007007225 hypothetical protein RaK2_0070 [Enterobacteria phage vB_KleM-RaK2 ]; MS

0    

orf231 162139..165603 - 3465 131411 4.8 1154 baseplate wedge AGC35217 hypothetical protein [Escherichia phage PBECO4]; MS

0    

orf232 165679..166068 - 390 14846 4.9 129 base plate protein; phage T4 gp25 homolog

AGC35216 hypothetical protein [Escherichia phage PBECO4]; PB001307 Pfam-B_1307 & PF04965.8 GPW_gp25; MS

3.67E-54 2ia7 Tail lysozyme, putative {Geobacter sulfurreducens}

2.50E-09

orf233 166079..166567 - 489 18106 9.1 162 baseplate hub subunit and tail lysozyme; phage T4 gp5 homolog

AGC35215 T4-like lyzozyme [Escherichia phage PBECO4]; PF00959.13 Phage_lysozyme

3.02E-65 2o4w Lysozyme {Enterobacteria phage T4}

1.50E-21

orf234 166603..169287 - 2685 96994 5.6 894 baseplate hub subunit and tail lysozyme; phage T4 gp5 homolog

YP_007007233 putative virion protein and lysozyme murein [Enterobacteria phage vB_KleM-RaK2]; PF00959.13 Phage_lysozyme; MS

0 1swy Lysozyme {Enterobacteria phage T4}

8.40E-20

orf235 169287..171674 - 2388 88940 4.8 795 conserved hypothetical protein AGC35213 hypothetical protein [Escherichia phage PBECO4]

0    

orf236 171686..172000 - 315 12183   104 conserved hypothetical protein AGC35212 hypothetical protein [Escherichia phage PBECO4]

4.28E-41    

orf237 172000..172737 - 738 27686 6.1 245 putative structural protein AGC35211 hypothetical protein [Escherichia phage PBECO4]; MS

3.39E-116    

orf238 172855..173715 + 861 33534   286 sigma factor for late transcription; T4 gp55 homolog

AGC35210 RNA polymerase sigma factor [Escherichia phage PBECO4]; 55[PHA02547], RNA polymerase sigma factor

6.30E-151    

orf239 173702..174733 + 1032 39961 5.2 343 recombination endonuclease subunit; phage T4 gp47 homolog

AGC35209 endonuclease subunit [Escherichia phage PBECO4]; PF12850.1 Metallophos_2

0 3tho Exonuclease, putative; adenosine triphosphate, DNA breaks, DNA repair enzymes {Thermotoga maritima}

5.50E-16

orf240 174746..176887 + 2142 81951 4.8 713 recombination endonuclease subunit; phage T4 gp46 homolog

YP_007007239 recombination endonuclease subunit [Enterobacteria phage vB_KleM- RaK2]; PB010468 Pfam-B_10468

0 3qks DNA double-strand break repair RAD50 ATPase; RECA-like fold, ATPase, {Pyrococcus furiosus}

1.50E-13

orf241 176902..177396 - 495 18831 9.5 164 EndoVII packaging and recombination endonuclease; phage T4 gp49 homolog

AGC35207 recombination endonuclease VII [Escherichia phage PBECO4]; 49[PHA02565], recombination endonuclease VII;

1.06E-81 1e7l GP49, recombination endonuclease VII {Bacteriophage T4}

1.70E-10

orf242 178201..178377 - 177 6852 6.2 58 conserved hypothetical protein AGC35206 hypothetical protein [Escherichia phage PBECO4]

3.28E-14    

orf243 178398..179255 - 858 32653 4.5 285 baseplate hub subunit protein AGC35205 baseplate hub subunit [Escherichia phage PBECO4]

1.50E-103    

orf244 179319..181481 + 2163 78421 5.2 720 structural protein AGC35204 hypothetical protein [Escherichia phage PBECO4]; MS

1.85E-123    

orf245 181500..183242 + 1743 65245 4.8 580 portal protein; phage T4 gp20 homolog

AGC35203 portal vertex protein [Escherichia phage PBECO4]; PF07230.5 Phage_T4_Gp20; MS

0 2jes_A Portal protein; DNA translocation, molecular motor, VIRA

2.5

protein, viral protein; 3.4A {Bacteriophage SPP1}

orf246 183299..183529 + 231 8657   76 conserved hypothetical protein YP_007007245 hypothetical protein RaK2_00090 [Enterobacteria phage vB_KleM-RaK2]

3.35E-26    

orf247 183637..184479 + 843 31015 4.1 280 conserved hypothetical protein YP_007007246 hypothetical protein RaK2_00091 [Enterobacteria phage vB_KleM-RaK2]

2.38E-56    

orf248 184502..185134 + 633 23378 5.8 210 prohead core scaffold and protease; phage T4 gp21 homolog

AGC35200 prohead core scaffolding protein and protease [Escherichia phage PBEC O 4]; PF03420.7 Peptidase_U9; MS

2.28E-112    

orf249 185204..186331 + 1128 42708 5.8 375 conserved hypothetical protein AGC35199 hypothetical protein [Escherichia phage PBECO4]

8.44E-176    

orf250 186409..187584 + 1176 42103 5.8 391 major capsid protein; phage T4 gp23 homolog

YP_007007249 major capsid protein [Enterobacteria phage vB_KleM-RaK2]; PF07068.5 Gp23; MS

0 1yue Head vertex protein GP24 {Enterobacteria phage T4}

8.10E-41

orf251 187674..187907 + 234 8568 4.5 77 conserved hypothetical protein C-terminus YP_006969 hypothetical protein T5.141 [Enterobacteria phage T5]

7.09E-07    

orf252 187968..188384 + 417 15980 4.8 138 conserved hypothetical protein AGC35197 hypothetical protein [Escherichia phage PBECO4]

8.08E-08    

orf253 188413..188724 + 312 12019 5.4 103 conserved hypothetical protein AGC35196 hypothetical protein [Escherichia phage PBECO4]; PF10544.3 T5orf172

1.03E-48    

orf254 188769..190388 + 1620 56894 6.2 539 putative tail fiber protein AGC35195 hypothetical protein [Escherichia phage PBECO4]; MS

9.70E-166    

orf255 190381..190794 + 414 16163 4.8 137 caudovirales tail fibre assembly protein

YP_006987063 tail fiber assembly protein [Cronobacter phage vB_CsaM_GAP31]

2.89E-10    

orf256 190881..191183 + 303 11335 4.9 100 conserved hypothetical protein YP_007007254 hypothetical protein RaK2_00099 [Enterobacteria phage vB_KleM-RaK2]

1.03E-30    

orf257 191245..194277 + 3033 115975 5.0 1010 DNA polymerase; phage T4 gp43 homolog

AGC35192 DNA polymerase [Escherichia phage PBECO4]; PF03104.13 DNA_pol_B_exo1 & PF00136.15 DNA_pol_B

0 3qex DNA polymerase, GP43 {Enterobacteria phage RB69}

8.10E-60

orf258 194293..194802 + 510 18983   169 conserved hypothetical protein AGC35190 hypothetical protein [Escherichia phage PBECO4]

2.05E-05    

orf259 194866..195597 + 732 26735 5.3 243 conserved hypothetical protein AGC35189 hypothetical protein [Escherichia phage PBECO4]

1.63E-116    

orf260 195646..196251 + 606 23490 6.1 201 putative phosphoesterase or phosphohydrolase

YP_004300651 putative phosphoesterase or phosphohydrolase [Acinetobacter phage 133]; PB001300 Pfam-B_1300

1.17E-43 2a22 Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich {Cryptosporidium parvum}

3.20E-06

orf261 196271..196480 + 210 8036 6.0 69 conserved hypothetical protein AGC35188 hypothetical protein [Escherichia phage PBECO4]; PF09723.4 CxxC_CxxC_SSSS

3.18E-27 1qyp RNA polymerase II; transcription, RPB9 {Thermococcus celer}

5.80E-05

orf262 196502..196789 + 288 10282 4.7 95 co-chaperonin GroES AGC35187 hypothetical protein [Escherichia phage PBECO4]; PF00166.15 Cpn10

1.12E-32 1g31 GP31; chaperone, CO-chaperonin, groes {Enterobacteria phage T4}

6.60E-10

orf263 196782..197501 + 720 28686 4.7 239 conserved hypothetical protein AGC35186 hypothetical protein [Escherichia phage PBECO4]

1.99E-68    

orf264 197546..198202 - 657 22445 5.1 218 structural protein YP_007007261 hypothetical protein RaK2_00106 [Enterobacteria phage vB_KleM-RaK2]; MS

4.89E-83    

orf265 198218..198778 - 561 19138 4.6 186 structural protein YP_007007262 hypothetical protein RaK2_00107 [Enterobacteria phage vB_KleM-RaK2]; MS

8.32E-54    

orf266 198974..199960 + 987 38114   328 RNaseH ribonuclease YP_007007263 RnaseH [Enterobacteria phage vB_KleM-RaK2]; PF02739.10 5_3_exonuc_N

0 3h7i Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease {Enterobacteria phage T4}

1.10E-16

orf267 199960..200460 + 501 18983 4.4 166 conserved hypothetical protein AGC35182 hypothetical protein [Escherichia phage PBECO4]

1.33E-61    

orf268 200504..201211 + 708 27395 6.5 235 terminase DNA packaging enzyme large subunit; phage T4 gp17 homolog

YP_008126418 terminase large subunit [Synechococcus phage S-IOM18]

1.01E-11 3cpe Terminase, DNA packaging protein GP17 {Bacteriophage T4}

2.50E-14

orf269 201198..202847 + 1650 62998 5.5 549 DNA terminase packaging enzyme large subunit; phage T4 gp17 homolog

AGC35180 large terminase protein [Escherichia phage PBECO4]; PF03237.9 Terminase_6

0 3cpe Terminase, DNA packaging protein GP17 {Bacteriophage T4}

2.50E-44

orf270 202884..204173 + 1290 48636 6.2 429 conserved hypothetical protein YP_007007267 hypothetical protein RaK2_00112 [Enterobacteria phage vB_KleM-RaK2]

0    

orf271 204399..205442 + 1044 38586 5.3 347 ssDNA binding protein; phage T4 gp32 homolog

AGC35178 hypothetical protein [Escherichia phage PBECO4]

2.56E-158 2a1k GP32 single stranded DNA binding protein {Enterobacteria phage RB69}

3.40E-08

orf272 205501..206631 + 1131 41473 4.9 376 UvsX RecA-like protein AGC35177 recombination and repair protein [Escherichia phage

0 3io5 Recombination

1.00E-29

PBECO4]; PF00154.15 RecA and repair protein; RECA like core domain {Enterobacteria phage T4}

orf273 206633..207097 + 465 17920 5.4 154 conserved hypothetical protein AGC35176 hypothetical protein [Escherichia phage PBECO4]

3.11E-70    

orf274 207155..208063 + 909 34589 8.6 302 conserved hypothetical protein YP_002922629 P15 [Xanthomonas phage phiL7]

1.41E-41    

orf275 208050..208895 + 846 32628 4.5 281 putative exonuclease AGC35175 putative exonuclease [Escherichia phage PBECO4]; PF00929.18 RNase_T & cd06127, DEDDh 3'-5' exonuclease domain family

1.60E-95 2p1j POLIII, DNA polymerase III POLC-type {Thermotoga maritima MSB8}

1.80E-18

orf276 208919..210403 + 1485 56077 6.2 494 RNA-DNA + DNA-DNA helicase YP_007007273 helicase [Enterobacteria phage vB_KleM-RaK2]; PF04851.9 ResIII

0 2pl3 Probable ATP-dependent RNA helicase DDX10 {Homo sapiens}

1.00E-14

orf277 210457..210897 + 441 17196 3.6 146 conserved hypothetical protein AGC35173 hypothetical protein [Escherichia phage PBECO4]

8.79E-53    

orf278 210907..211410 + 504 19199 4.4 167 conserved hypothetical proteinin AGC35172 hypothetical protein [Escherichia phage PBECO4]

3.38E-100    

orf279 211410..212255 + 846 32336 5.1 281 conserved hypothetical protein YP_007007276 hypothetical protein RaK2_00121 [Enterobacteria phage vB_KleM-RaK2]

5.32E-105    

orf280 212242..212961 + 720 28741 8.2 239 conserved hypothetical protein YP_007007277 hypothetical protein RaK2_00122 [Enterobacteria phage vB_KleM-RaK2]

1.71E-96    

orf281 212958..213308 + 351 13451 6.5 116 conserved hypothetical protein AGC35169 hypothetical protein [Escherichia phage PBECO4]

8.46E-10    

orf282 213274..213924 + 651 25050 5.7 216 conserved hypothetical membrane protein

AGC35168 hypothetical protein [Escherichia phage PBECO4]; 1 transmembrane domains shown using TMHMM 2.0 and Phobius

1.07E-128    

orf283 213908..214261 - 354 14194 8.8 117 conserved hypothetical protein AGC35167 hypothetical protein [Escherichia phage PBECO4]

9.59E-55    

orf284 214319..215290 + 972 36566 5.3 323 structural protein AGC35166 hypothetical protein [Escherichia phage PBECO4]; MS

5.28E-160    

orf285 215353..216399 + 1047 40474 5.8 348 DNA primase AGC35165 DNA primase subunit [Escherichia phage PBECO4]

2.18E-173 2au3 DNA primase {Aquifex aeolicus}

3.50E-11

orf286 216407..217909 + 1503 55919 5.6 500 DNA primase-helicase; coliphage T4 gp41 homolog

AGC35164 DNA primase-helicase subunit [Escherichia phage PBECO4]; PF03796.9 DnaB_C

0 3bh0 DNAB-like replicative helicase {Bacillus phage SPP1}

3.50E-19

orf287 217912..218181 + 270 10382 6.1 89 conserved hypothetical protein AGC35163 hypothetical protein [Escherichia phage PBECO4]

7.67E-35    

orf288 218183..218341 + 159 5660 10.1 52 conserved hypothetical protein AGC35162 hypothetical protein [Escherichia phage PBECO4]

3.81E-15    

orf289 218345..218743 + 399 14731 5.3 132 conserved hypothetical protein AGC35161 hypothetical protein [Escherichia phage PBECO4]

2.39E-64    

orf290 218789..219736 + 948 34670 4.4 315 conserved hypothetical protein AGC35160 hypothetical protein [Escherichia phage PBECO4]

8.29E-78    

orf291 219736..219954 + 219 8396   72 conserved hypothetical protein AGC35159 hypothetical protein [Escherichia phage PBECO4]

1.22E-17    

orf292 219951..220754 + 804 30275 4.7 267 conserved hypothetical protein AGC35158 hypothetical protein [Escherichia phage PBECO4]

2.04E-53    

orf293 220787..221434 + 648 23770   215 structural protein AGC35157 hypothetical protein [Escherichia phage PBECO4]; MS

1.56E-93    

orf294 221446..221781 + 336 12144 4.2 111 conserved hypothetical protein AGC35156 hypothetical protein [Escherichia phage PBECO4]

9.46E-50    

orf295 221821..222522 + 702 26568 5.1 233 exonuclease AGC35155 putative exonuclease 6.66E-140 3h4r 4.30E-

[Escherichia phage PBECO4]; PF12705.1 PDDEXK_1

Exodeoxyribonuclease 8; exonuclease {Escherichia coli}

05

orf296 222526..223077 + 552 20284 4.7 183 conserved hypothetical protein YP_007007293 hypothetical protein RaK2_00138 [Enterobacteria phage vB_KleM-RaK2]

4.16E-33    

orf297 223106..223684 + 579 20927 5.0 192 structural protein AGC35153 hypothetical protein [Escherichia phage PBECO4]; MS

2.12E-73    

orf298 223756..226089 + 2334 87807 5.7 777 ribonucleotide-diphosphate reductase alpha subunit

AGC35152 aerobic ribonucleoside diphosphate reductase large subunit [Escherichia phage PBECO4]]; PF03477.10 ATP-cone & PF00317.15 Ribonuc_red_lgN & PF02867.1 Ribonuc_red_lgC

0 2xap Ribonucleoside-diphosphate reductase 1 subunit alpha {Escherichia coli}

6.60E-134

orf299 226147..226884 + 738 28846 9.1 245 conserved hypothetical protein C-terminus AGF89288 hypothetical protein SP062_00040 [Salmonella phage FSL SP-062]

9.27E-28    

orf300 226897..228021 + 1125 43176 4.8 374 ribonucleotide-diphosphate reductase subunit beta

AGC35151 aerobic ribonucleoside diphosphate reductase small subunit [Escherich ia phage PBECO4]; PF00268.15 Ribonuc_red_sm

0 3n37 Ribonucleoside-diphosphate reductase 2 subunit BE {Escherichia coli}

1.50E-45

orf301 228061..228267 + 207 7879 4.3 68 hypothetical protein        orf302 228310..228543 + 234 9088 9.8 77 conserved hypothetical protein AGC35149 hypothetical protein

[Escherichia phage PBECO4]1.11E-20    

orf303 228555..228935 + 381 14838 4.6 126 conserved hypothetical protein YP_007007298 hypothetical protein RaK2_00143 [Enterobacteria phage vB_KleM-RaK2]

1.69E-34    

orf304 228935..229651 + 717 26508 4.9 238 conserved hypothetical protein AGC35147 hypothetical protein [Escherichia phage PBECO4];

3.18E-52 2yf4 MAZG-like nucleoside

8.50E-19

PF01503.11 PRA-PH triphosphate pyrophospho-hydrolase {Deinococcus radiodurans}

orf305 229680..230324 - 645 24072 7.6 214 conserved hypothetical protein AGC35146 hypothetical protein [Escherichia phage PBECO4]

4.17E-16    

orf306 230336..231046 - 711 26388 7.6 236 conserved hypothetical membrane protein

AGC35145 hypothetical protein [Escherichia phage PBECO4]; 1 transmembrane domains shown using TMHMM 2.0 and Phobius

7.52E-66    

orf307 231179..231553 + 375 14214 9.5 124 hypothetical membrane protein 2-3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf308 231550..232068 + 519 19567 5.9 172 dihydrofolate reductase YP_007007303 dihydrofolate reductase [Enterobacteria phage vB_KleM-RaK2]; PF00186.13 DHFR_1

2.99E-47 3dau Dihydrofolate reductase {Escherichia coli}

2.10E-29

orf309 232069..232503 + 435 16192 6.1 144 ribonuclease H AGC35142 ribonuclease HI [Escherichia phage PBECO4]; PF00075.18 RNase_H

3.95E-34 3h08 RNH (ribonuclease H); RNAse H {Chlorobaculum tepidum}

2.40E-28

orf310 232500..233840 + 1341 51391 5.7 446 DNA helicase Dda AGC35141 DNA helicase [Escherichia phage PBECO4]; PF05970.8 PIF1 & PB010441 Pfam-B_10441

0 1w36 RECD, exodeoxyribonuclease V alpha chain; recombination, helicase {Escherichia coli}

6.50E-31

orf311 233911..234456 + 546 19858 4.7 181 structural protein AGC35140 hypothetical protein [Escherichia phage PBECO4]; MS

1.04E-37    

orf312 234477..234671 + 195 7286 5.0 64 conserved hypothetical protein AGC35139 hypothetical protein [Escherichia phage PBECO4]

6.48E-14    

orf313 234744..235250 + 507 18857 9.4 168 translation initiation factor IF-3 AGC35138 hypothetical protein 2.32E-58 1tif IF3-N, 2.40E-

[Escherichia phage PBECO4]; PF05198.10 IF3_N & PF00707.16 IF3_C

translation initiation factor 3 {Geobacillus stearothermo-philus}

13

orf314 235317..235850 + 534 20167   177 ATP-dependent Clp protease YP_007007309 hypothetical protein RaK2_00154 [Enterobacteria phage vB_KleM-RaK2] ; PF02617.11 Clp

4.57E-37 3o1f ATP-dependent CLP protease adapter protein CLPS {Escherichia coli}

9.80E-09

orf315 235913..236446 + 534 20694 9.4 177 structural protein AGC35136 hypothetical protein [Escherichia phage PBECO4]; MS

2.22E-92    

orf316 236436..238043 + 1608 61777 5.4 535 structural protein AGC35135 hypothetical protein [Escherichia phage PBECO4]; MS

1.44E-59    

orf317 238043..240577 + 2535 95930 5.1 844 structural protein AGC35134 hypothetical protein [Escherichia phage PBECO4]; MS

3.59E-41    

orf318 240587..240952 + 366 13946 7.1 121 conserved hypothetical membrane protein

YP_004301135 hypothetical protein 65p298 [Aeromonas phage 65]; 1 transmembrane domains shown using TMHMM 2.0 and Phobius; PF11750.2 DUF3307

3.80E-44    

orf319 241048..243015 + 1968 74055 6.2 655 DNA gyrase, subunit B; coliphage T4 gp60plus39 homolog

YP_007007312 topoisomerase II large subunit [Enterobacteria phage vB_KleM-RaK2 ]; PF02518.20 HATPase_c & PF00204.19 DNA_gyraseB

0 3m4i DNA gyrase subunit B {Myco-bacterium tuberculosis}

5.40E-33

orf320 243067..244473 + 1407 53217 5.0 468 DNA topoisomerase II; coliphage T4 gp52 homolog

AGC35132 topoisomerase II medium subunit [Escherichia phage PBECO4]; PF00521.1 DNA_topoisoIV

0 3ilw DNA gyrase subunit A {Myco-bacterium tuberculosis}

2.60E-51

orf321 244559..246931 + 2373 88301 4.8 790 structural protein AGC35131 hypothetical protein [Escherichia phage PBECO4]; MS

0    

orf322 246941..247246 + 306 11696 5.1 101 conserved hypothetical protein AGC35130 hypothetical protein [Escherichia phage PBECO4]

3.95E-24    

orf323 247206..247724 + 519 20520 4.6 172 DNA polymerase III, alpha subunit

AGC35129 hypothetical protein [Escherichia phage PBECO4]; PF07733.6 DNA_pol3_alpha

5.50E-100 2hnh DNA polymerase III alpha subunit {Escherichia coli}

3.70E-07

orf324 247771..248145 + 375 13939 5.7 124 conserved hypothetical protein AGC35128 hypothetical protein [Escherichia phage PBECO4]

3.78E-33    

orf325 248156..248476 + 321 11640 5.6 106 conserved hypothetical protein AGC35127 hypothetical protein [Escherichia phage PBECO4]

1.32E-41    

orf326 248521..248811 + 291 11219 4.9 96 conserved hypothetical protein AGC35126 hypothetical protein [Escherichia phage PBECO4]

1.34E-20    

orf327 248814..249770 + 957 36222 4.8 318 sliding clamp loader subunit; phage T4 gp44 homolog

AGC35125 clamp loader subunit DNA polymerase accessory protein [Escherichia ph age PBECO 4]; PF00004.23 AAA

0 2gno DNA polymerase III, gamma subunit-related protein {Thermotoga maritima}

1.90E-21

orf328 249779..250399 + 621 24045 4.7 206 conserved hypothetical protein; phage T4 gp30.2 homolog

YP_007007322 hypothetical protein RaK2_00167 [Enterobacteria phage vB_KleM-RaK2]

7.39E-52 3m9l Hydrolase, haloacid dehalogenase-like family {Pseudomonas fluorescens}

4.30E-08

orf329 250457..251029 + 573 21826 4.2 190 conserved hypothetical protein AGC35123 hypothetical protein [Escherichia phage PBECO4]

3.09E-62    

orf330 251029..251712 + 684 25838 4.3 227 structural protein AGC35122 hypothetical protein [Escherichia phage PBECO4]; MS

2.31E-105    

orf331 251727..252506 + 780 30120 7.6 259 conserved hypothetical protein AGC35121 hypothetical protein [Escherichia phage PBECO4]

1.71E-83    

orf332 252645..253196 + 552 19812 5.4 183 hypothetical protein        orf333 253233..253433 + 201 7023   66 hypothetical protein        

orf334 253494..254684 + 1191 45651 5.0 396 hypothetical protein AGC35120 hypothetical protein [Escherichia phage PBECO4]

1.42E-113    

orf335 254773..255921 + 1149 42784 5.4 382 conserved hypothetical protein AGC35119 hypothetical protein [Escherichia phage PBECO4]; PF05816.5 TelA

6.16E-106    

orf336 255989..256321 + 333 12997 4.2 110 conserved hypothetical protein YP_002854040 hypothetical protein RB51ORF087 [Enterobacteria phage RB51]

5.54E-11    

orf337 256321..257001 + 681 25805 4.7 226 putative metallopeptidase YP_007007328 putative peptidase [Enterobacteria phage vB_KleM-RaK2]

3.47E-56    

orf338 257057..258154 + 1098 42114 7.6 365 conserved hypothetical membrane protein

AGC35117 hypothetical protein [Escherichia phage PBECO4]; 2-3 transmembrane domains shown using TMHMM 2.0 and Phobius

1.12E-129    

orf339 258151..258705 + 555 20860   184 structural protein YP_007007330 hypothetical protein RaK2_00175 [Enterobacteria phage vB_KleM-RaK2]; MS

1.41E-60    

orf340 258809..258991 + 183 6586   60 hypothetical protein        orf341 259002..259349 + 348 13082 8.4 115 conserved hypothetical

membrane proteinYP_007007333 hypothetical protein RaK2_00178 [Enterobacteria phage vB_KleM-RaK2] ; 2 transmembrane domains shown using TMHMM 2.0 and Phobius

2.50E-10    

orf342 259390..259875 + 486 18905 5.1 161 conserved hypothetical protein AGC35112 hypothetical protein [Escherichia phage PBECO4]

5.57E-43 2b3w Hypothetical protein YBIA; structure, NESG {Escherichia coli}

3.30E-09

orf343 259933..261381 + 1449 54847 4.4 482 hypothetical protein        orf344 262291..262701 + 411 15955 4.2 136 hypothetical protein        orf345 262704..262907 + 204 7963   67 hypothetical protein        

orf346 262907..263254 + 348 13607 4.7 115 hypothetical protein        orf347 263256..263558 + 303 11937 4.4 100 conserved hypothetical protein C-terminus CBY99634

Phi92_gp205 [Enterobacteria phage phi92]

1.06E-06    

orf348 263573..264292 + 720 27715 4.5 239 conserved hypothetical protein YP_006988317 hypothetical protein CcrColossus_gp083 [Caulobacter phage CcrColo ssus]; PB005443 Pfam-B_5443 & PB007575 Pfam-B_7575

2.59E-16    

orf349 264282..264530 + 249 9852 5.8 82 conserved hypothetical protein YP_007007335 hypothetical protein RaK2_00180 [Enterobacteria phage vB_KleM-RaK2]

2.16E-15    

orf350 264535..264729 + 195 7642 4.3 64 hypothetical protein        orf351 264742..265764 + 1023 40018 4.6 340 conserved hypothetical protein YP_007236771 hypothetical protein

BcepMigl_gp25 [Burkholderia phage BcepMigl]

3.98E-35    

orf352 265774..266145 + 372 14152 4.7 123 conserved hypothetical protein YP_007348814 hypothetical protein KP27_193 [Klebsiella phage KP27]

2.59E-39    

orf353 266164..267210 + 1047 40203 5.9 348 nicotinamide-nucleotide adenylyltransferase

AFU63704 hypothetical protein [Salmonella phage SSE-121]; PF01467.1 CTP_transf_2

4.77E-90 1lw7 Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase {Haemophilus influenzae}

1.20E-39

orf354 267207..268010 + 804 30245 9.0 267 nicotinamide mononucleotide transporter PnuC

YP_004893838 32 gene product [Salmonella phage PVP-SE1]; 7-9 transmembrane domains shown using TMHMM 2.0 and Phobius; PF04973.6 NMN_transporter

3.55E-85    

orf355 268000..268626 + 627 24672 8.4 208 conserved hypothetical protein AGG57925 hypothetical protein VPBG_00153 [Vibrio phage helene 12B3 ] & AGN51614 hypothetical protein VPLG_00175 [Vibrio phage eug ene 12A10]

1.01E-47    

orf356 268613..268855 + 243 9155 4.5 80 conserved hypothetical protein AGF89364 hypothetical protein SP062_00420 [Salmonella phage FSL SP-062]

8.30E-06    

orf357 268904..269326 + 423 16964 5.5 140 conserved hypothetical protein AGC35109 hypothetical protein [Escherichia phage PBECO4]

5.08E-20    

orf358 269323..269634 + 312 11692 5.3 103 hypothetical protein        orf359 269643..269978 + 336 12455 4.6 111 hypothetical protein        orf360 269962..270321 + 360 14007 4.5 119 hypothetical protein        orf361 270332..270517 + 186 7285   61 hypothetical protein        orf362 270634..271083 + 450 17242 4.5 149 hypothetical protein        orf363 271209..271508 + 300 11382 3.8 99 hypothetical protein        orf364 271501..271920 + 420 16097 4.5 139 hypothetical protein        orf365 271917..272741 + 825 31150 4.9 274 conserved hypothetical protein YP_001950214 unnamed protein

product [Ralstonia phage RSL1]; PB002278 Pfam-B_2278

1.18E-19    

orf366 272741..274003 + 1263 49216 4.9 420 conserved hypothetical protein AFN37497 hypothetical protein pp2_264 [Vibriophage phi-pp2]

3.09E-38    

orf367 274092..275309 + 1218 46251 4.8 405 conserved hypothetical protein YP_007348620 putative ATPase [Escherichia phage phAPEC8]

3.41E-82 3bos Putative DNA replication factor {Shewanella amazonensis}

1.30E-11

orf367A 275385..275516 + 132 4615 4.4 43 hypothetical protein        orf368 275687..276160 + 474 18209 6.0 157 hypothetical protein        orf369 276184..276516 + 333 12997 6.1 110 conserved hypothetical protein YP_006383212 hypothetical protein

CR3_197 [Cronobacter phage CR3] 3.13E-06    

orf370 276520..277107 + 588 21972 6.0 195 putative 5'3'-deoxyribonucleotidase

AFN37302 putative 5'(3')-deoxyribonucleotidase [Vibriophage phi-pp2]; PF06941.6 NT5C

2.37E-14 1q92 5(3)-deoxyribonuc-leotidase;

1.20E-07

alpha-beta rossman fold, hydrolase {Homo sapiens}

orf371 277101..277661 + 561 21543 4.4 186 conserved hypothetical protein AGC35105 hypothetical protein [Escherichia phage PBECO4]

1.08E-21    

orf372 277780..278358 + 579 22167 5.8 192 hypothetical protein        orf373 278826..279515 + 690 26494 9.2 229 HNH endonuclease CCI89032 protein of unknown

function [Yersinia phage phiD1]; PB000761 Pfam-B_761

2.26E-09    

orf374 279512..279838 + 327 12971 4.4 108 conserved hypothetical protein CBY99541 Phi92_gp112 [Enterobacteria phage phi92]

2.30E-14    

orf374A 280174..280323 + 150 5336 9.1 49 hypothetical protein        orf375 280323..280577 + 255 9838 4.3 84 hypothetical protein        orf376 280628..281365 + 738 30017 5.0 262 conserved hypothetical protein YP_006988558 hypothetical protein

CcrColossus_gp324 [Caulobacter phage CcrColo ssus]; PB002278 Pfam-B_2278

7.21E-16    

orf377 281358..281717 + 360 14299 5.6 119 hypothetical protein        orf378 281689..282153 + 465 17914 4.8 154 hypothetical protein        orf379 282150..282419 + 270 10483 4.0 89 hypothetical protein        orf380 282416..282973 + 558 22441   185 hypothetical protein        orf381 283251..283379 + 129 4820   42 hypothetical protein        orf382 283354..283782 + 429 16811 6.9 142 peptidyl-tRNA hydrolase YP_007007343 hypothetical protein

RaK2_00188 [Enterobacteria phage vB_KleM-RaK2] ; PF01981.10 PTH2

2.48E-28 1xty PTH, peptidyl-tRNA hydrolase {Pyrococcus abyssi}

8.80E-12

orf383 283782..284135 + 354 13523 5.1 117 hypothetical protein        orf384 284388..284747 + 360 13779 5.6 119 conserved hypothetical

membrane proteinYP_007007345 hypothetical protein RaK2_00190 [Enterobacteria phage vB_KleM-RaK2] ; 1 transmembrane domains shown using TMHMM 2.0 and Phobius

1.67E-23    

orf385 284737..284970 + 234 8731 9.0 77 hypothetical protein        orf386 284951..285220 + 270 10753 9.0 89 hypothetical protein        orf387 285373..285627 + 255 10046 6.1 84 conserved hypothetical protein YP_007007347 hypothetical protein

RaK2_00192 [Enterobacteria phage vB_KleM-RaK2]

1.25E-41    

orf388 285637..286008 + 372 14015 4.4 123 hypothetical protein        orf389 285992..286456 + 465 18301 5.3 154 hypothetical protein        orf390 286477..287343 + 867 33037 5.2 288 DNA-cytosine methyltransferase AGC35096 putative DNA-

methyltransferase [Escherichia phage PBECO4]; PF00145.11 DNA_methylase

4.78E-159 2qrv DNA (cytosine-5)-methyltransfer-ase 3A; DNA methyltransfer-ase 3A (DNMT3A) and ITS regulatory factor {Homo sapiens}

4.90E-33

orf391 287330..287899 + 570 21612 4.7 189 hypothetical protein        orf392 287902..288243 + 342 13277 8.6 113 hypothetical protein        orf393 288240..288941 + 702 27282 4.6 233 hypothetical protein        orf394 288952..289332 + 381 15049 5.6 126 hypothetical protein        orf395 289304..289501 + 198 7892   65 hypothetical protein        orf396 289795..290124 + 330 12655   109 hypothetical protein        orf397 290231..290464 + 234 8800 6.7 77 conserved hypothetical protein YP_007007371 hypothetical protein

RaK2_00216 [Enterobacteria phage vB_KleM-RaK2]

4.97E-08    

orf398 290461..290601 + 141 5334 4.7 46 hypothetical protein        orf398A 290609..290803 + 195 7954 10.1 64 hypothetical membrane protein 2 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf399 290716..291027 + 312 11881 6.1 103 conserved hypothetical protein EGH82531.1 hypothetical protein PLA107_05316 [Pseudomonas syringae pv. lachrymans str. M301315]

orf400 291075..291518 + 444 17674   147 hypothetical protein        orf401 291515..291703 + 189 7382 3.7 62 hypothetical protein        

orf402 291705..292055 + 351 13300   116 conserved hypothetical protein AGR47915 hypothetical protein SmphiM12_283 [Sinorhizobium phage phiM12]

1.46E-06    

orf403 292636..292926 + 291 10923 9.6 96 hypothetical membrane protein 2 transmembrane domains shown using TMHMM 2.0 and Phobius

orf404 292929..293180 + 252 9457 9.5 83 conserved hypothetical protein YP_004327451 putative uncharacterised protein [Salmonella phage ViI] & YP_004895246 unnamed protein product [Salmonella phage SFP10] >gi|37 2199440|ref|YP_004957776.1| orf096 gene product [Escherichia phage Cba120] & YP_007002719 hypothetical protein [Escherichia phage PhaxI]

2.29E-17    

orf405 293461..293670 + 210 8021 6.6 69 conserved hypothetical protein CBY99453 Phi92_gp025 [Enterobacteria phage phi92]

9.74E-06    

orf406 293678..293833 + 156 5525   51 conserved hypothetical protein YP_002456059 hypothetical protein Ea21-4_gp36 [Erwinia phage phiEa21-4]

2.84E-12    

orf407 293896..294699 - 804 31268 9.5 267 hypothetical protein        orf408 294959..295111 + 153 5795 6.5 50 hypothetical protein        orf409 295120..295320 + 201 7976   66 hypothetical protein        orf410 295320..295526 + 207 7487 9.3 68 hypothetical membrane protein 1 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf411 295568..295723 + 156 5697 7.8 51 hypothetical protein        orf412 295723..296166 + 444 16983 4.6 147 hypothetical protein  pfam00583, Acetyltransferase

(GNAT) family  2i79

Acetyltransfer-ase, GNAT family; acetyl coenzyme *A {Streptococcus pneumoniae}

7.10E-06

orf413 296279..296473 + 195 7209 6.2 64 conserved hypothetical protein AEK82041.1 hypothetical protein [Salmonella phage 7-11]

1.05E-06    

orf414 296613..297065 + 453 17772 4.6 150 hypothetical protein        orf415 297140..297949 + 810 31348 4.7 269 conserved hypothetical protein YP_007007362 hypothetical protein

RaK2_00207 [Enterobacteria phage vB_KleM-RaK2]

1.67E-06    

orf416 297942..298349 + 408 15978 5.1 135 conserved hypothetical protein YP_007007397 hypothetical protein RaK2_00242 [Enterobacteria phage vB_KleM-RaK2]

7.63E-20    

orf417 298520..298813 + 294 11671 5.6 97 hypothetical protein        orf418 298891..299169 + 279 9906 5.4 92 hypothetical protein        orf419 299172..299369 + 198 7826 4.5 65 hypothetical protein        orf420 299353..299718 + 366 14420 4.6 121 hypothetical protein Protein motif: PB001179 Pfam-

B_1179     

orf421 299718..300074 + 357 13890 6.2 118 conserved hypothetical protein YP_004934453 g219 [Yersinia phage phiR1-37] ; PB001179 Pfam-B_1179

1.09E-06    

orf422 300226..300459 + 234 8608 9.0 77 hypothetical protein        orf423 300691..301053 + 363 13629 4.9 120 hypothetical membrane protein 1 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf424 301305..303038 + 1734 62024 4.8 577 putative adhesin C-terminus YP_007236296 hypothetical protein [Salmonella phage SKML-39]; YadA[pfam03895], YadA-like C-terminal region

1.57E-36 2gr8 Trimeric autotransporter, protein secretion, {Haemophilus influenzae}

1.20E-19

orf425 303094..303603 + 510 19615 4.7 169 hypothetical protein        orf426 303753..303968 + 216 8292 9.2 71 conserved hypothetical protein AGC35081 hypothetical protein

[Escherichia phage PBECO4]7.66E-16    

orf427 304033..304275 + 243 9435   80 hypothetical protein        

orf428 304288..304758 + 471 17474 9.2 156 conserved hypothetical membrane protein

YP_007007366 hypothetical protein RaK2_00211 [Enterobacteria phage vB_KleM-RaK2] ; 1 transmembrane domains shown using TMHMM 2.0 and Phobius

7.90E-16    

orf429 304793..305212 + 420 16021 4.3 139 conserved hypothetical protein YP_001836948.1 hypothetical protein AGC_0025 [Enterobacteria phage EPS7]

2.32E-29 1ly1 Polynucleotide kinase; PNK, phosphatase, transferase {Enterobacteria phage T4}

9.10E-07

orf430 305370..305945 + 576 22839   191 conserved hypothetical protein YP_238979 hypothetical protein RB43ORF003c [Enterobacteria phage RB43]; PF10263.3 SprT-like

4.87E-14    

orf431 306115..306261 + 147 5345 4.4 48 hypothetical protein        orf431A 306886..307005 + 120 4635 9.8 39 hypothetical membrane protein 1 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf432 307086..307487 + 402 15882 4.7 133 hypothetical protein        orf433 307507..307716 + 210 8020 5.3 69 hypothetical protein        orf434 307811..308035 + 225 8346   74 conserved hypothetical protein YP_004009376 hypothetical

protein Ac42p014 [Acinetobacter phage Ac42]

1.98E-25    

orf435 308035..308430 + 396 16009 4.8 131 hypothetical protein        orf436 309130..309729 + 600 23064 5.7 199 hypothetical protein     3smj Poly

[ADP-ribose] polymerase 14; transferase, NAD+, ADP-ribosylat transferase-transferase inhibitor complex {Homo sapiens}

2.60E-05

orf437 309762..310115 + 354 13687 9.5 117 conserved hypothetical protein YP_008433495 hypothetical protein PaBG_00164 [Pseudomonas phage PaBG] ; PF07087.5 DUF1353

2.56E-09    

orf438 310269..310403 + 135 4792   44 hypothetical protein        orf439 310615..310848 + 234 9115 4.4 77 hypothetical protein        orf439A 311282..311440 + 159 5809   52 hypothetical protein        orf440 311538..311864 + 327 12746 6.5 108 hypothetical protein        orf441 311953..312189 + 237 9313 4.4 78 hypothetical protein        orf442 312182..312667 + 486 19115 6.6 161 conserved hypothetical protein AGR48003 hypothetical protein

SmphiM12_371 [Sinorhizobium phage phiM12]

1.39E-06    

orf443 312669..312872 + 204 8200 4.4 67 hypothetical protein        orf444 312982..313200 + 219 8495 5.5 72 hypothetical protein        orf445 313197..313457 + 261 9890 9.7 86 hypothetical protein        orf446 313634..313855 + 222 8746 6.3 73 conserved hypothetical protein YP_002425630.1 hypothetical

protein AFE_1176 [Acidithiobacillus ferrooxidans ATCC 23270]

orf447 313852..314169 + 318 12551 4.5 105 hypothetical protein        orf448 314200..314595 + 396 15564 4.7 131 hypothetical protein        orf449 314599..315009 + 411 16109 5.2 136 hypothetical protein        orf449A 314978..315397 + 420 16678 4.7 139 hypothetical protein        orf450 315512..315712 + 201 7981 4.9 66 hypothetical protein        orf451 315702..316016 + 315 12192 10.0 104 conserved hypothetical protein YP_003969537.1 hypothetical

protein phiAS5_ORF0248 [Aeromonas phage phiAS5]

7.45E-20    

orf452 316013..316453 + 441 16846 4.6 146 hypothetical protein        orf453 316465..316917 + 453 17485 4.7 150 hypothetical protein        orf453A 316892..317140 + 249 9746   82 hypothetical protein Protein motif: PB000525 Pfam-

B_525     

orf454 317302..317748 + 447 16765   148 conserved hypothetical protein YP_007007385 hypothetical protein RaK2_00230 [Enterobacteria phage vB_KleM-RaK2]

5.46E-05    

orf455 317790..317963 + 174 6631   57 hypothetical protein        orf456 317950..318198 + 249 9197 9.6 82 hypothetical protein        

orf457 318301..318483 + 183 7012 4.2 60 hypothetical protein        orf458 318458..318586 + 129 5108   42 hypothetical protein        orf459 318586..318900 + 315 12040 9.5 104 hypothetical membrane protein 1 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf460 318900..319253 + 354 13058 7.6 117 conserved hypothetical membrane protein

AGC35052 hypothetical protein [Escherichia phage PBECO4]; 1 transmembrane domains shown using TMHMM 2.0 and Phobius

1.17E-05    

orf461 319250..319564 + 315 11698 7.6 104 conserved hypothetical protein YP_007007386 hypothetical protein RaK2_00231 [Enterobacteria phage vB_KleM-RaK2]

6.02E-07    

orf462 319576..319872 + 297 11036 8.9 98 conserved hypothetical protein YP_007007386 hypothetical protein RaK2_00231 [Enterobacteria phage vB_KleM-RaK2]

1.96E-05    

orf462A 319865..320059 + 195 7179 9.8 64 hypothetical protein        orf463 320056..320268 + 213 8123 4.6 70 hypothetical protein        orf464 320258..320740 + 483 18191 4.4 160 conserved hypothetical protein YP_656352.1 hypothetical protein

PHG25ORF117c [Aeromonas phage 25]

1.92E-16    

orf465 320779..321165 + 387 14027   128 hypothetical protein        orf466 321212..321346 + 135 4927   44 hypothetical protein        orf467 321386..321889 + 504 19777 5.1 167 hypothetical protein        orf468 321882..322511 + 630 24441   209 hypothetical protein        orf469 322595..322954 + 360 14067 4.4 119 hypothetical protein        orf470 323070..323258 + 189 7349 9.5 62 hypothetical protein        orf471 323266..323469 + 204 7617 6.7 67 hypothetical protein        orf472 323551..324291 - 741 28576 8.9 246 hypothetical protein        orf473 324781..325458 + 678 24471 4.5 225 conserved hypothetical protein AGC35049 hypothetical protein

[Escherichia phage PBECO4]8.20E-08    

orf474 325514..326056 + 543 21236 5.4 180 conserved hypothetical protein XP_001445153.1 hypothetical protein [Paramecium tetraurelia strain d4-2]

  3pfg N-methyltransfer-ase; N,N-dimethyltrans-ferase

8.20E-05

{Streptomyces fradiae}

orf475 326071..327204 - 1134 41213 4.4 377 putative structural protein AGC35048 hypothetical protein [Escherichia phage PBECO4]; MS

1.96E-77    

orf476 327382..327960 + 579 21894 6.7 192 conserved hypothetical protein AGC35047 hypothetical protein [Escherichia phage PBECO4]

1.26E-89    

orf477 327971..328273 + 303 11490 8.5 100 hypothetical protein        orf478 328277..328759 + 483 18320 9.5 160 hypothetical protein        orf479 328820..329347 + 528 19864 8.7 175 conserved hypothetical protein YP_007007393 hypothetical protein

RaK2_00238 [Enterobacteria phage vB_KleM-RaK2]

3.21E-16    

orf480 329395..329853 + 459 18250 7.7 152 hypothetical membrane protein 2-3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf481 329932..330177 + 246 9283 5.4 81 hypothetical protein        orf482 330170..330898 + 729 28493 5.1 242 hypothetical protein        orf483 330891..331010 + 120 3926 8.0 39 hypothetical protein        orf484 331012..331458 + 447 16858 9.4 148 conserved hypothetical

membrane proteinYP_004009751 hypothetical protein Acj61p134 [Acinetobacter phage Acj61]; 2-3 transmembrane domains shown using TMHMM 2.0 and Phobius

5.87E-12    

orf485 331473..332009 + 537 20761 5.8 178 hypothetical protein        orf486 332015..332320 + 306 11336 7.8 101 hypothetical protein        orf487 332320..332703 + 384 14677 5.6 127 hypothetical protein        orf487A 333386..333553 + 168 6074 5.0 55 hypothetical protein        orf488 333974..334204 + 231 8718 6.2 76 transcriptional regulator YP_007236435 hypothetical protein

PaP1_gp024 [Pseudomonas phage PaP1] ; PF12844.1 HTH_19

4.12E-07 3g5g Regulatory protein; transcriptional regulator, restriction- modification {Enterobacter SP}

3.00E-09

orf489 334201..334350 + 150 5596   49 hypothetical protein        

orf490 334445..335440 + 996 37916 4.8 331 RpoD subfamily RNA polymerase sigma-70 subunit

AGC35036 putative RNA polymerase sigma factor [Escherichia phage PBECO4]; PF04539.10 Sigma70_r3

7.63E-64 2a6h RNA polymerase sigma factor RPOD {Thermus thermophilus}

5.30E-19

orf491 335453..335962 + 510 19777 9.6 169 HNH endonuclease YP_002898939 putative HNH endonuclease [Roseophage EE36P1] ; PF00847.14 AP2

2.39E-36 1u3e HNH homing endonuclease {Bacillus phage SPO1}

2.60E-14

orf492 335965..336672 + 708 26770 4.5 235 conserved hypothetical protein AGR47833 hypothetical protein SmphiM12_201 [Sinorhizobium phage phiM12]

4.62E-52    

orf493 336681..336872 + 192 7150 9.9 63 hypothetical protein        orf494 336928..337902 + 975 37106 9.2 324 conserved hypothetical protein YP_007007270 hypothetical protein

RaK2_00115 [Enterobacteria phage vB_KleM-RaK2]

4.11E-64    

orf495 337899..338129 + 231 8573 4.2 76 hypothetical membrane protein 1 transmembrane domains shown using TMHMM 2.0 and Phobius

orf496 338131..338304 + 174 6447 9.0 57 hypothetical protein        orf497 338375..338614 + 240 9260 4.8 79 conserved hypothetical protein YP_007007447 hypothetical protein

RaK2_00292 [Enterobacteria phage vB_KleM-RaK2]

9.58E-16    

orf498 338619..339059 + 441 17301 7.8 146 DenV endonuclease V N-glycosylase UV repair enzyme

AGC34989 endonuclease V N-glycosylase UV repair enzyme [Escherichia phage PBEC O 4]; PF03013.8 Pyr_excise

3.32E-69 2end Endonuclease V {Enterobacteria phage T4}

9.90E-51

orf499 339116..339301 + 186 7249   61 hypothetical protein        orf500 339368..339778 + 411 16393 5.6 136 hypothetical protein        orf501 339775..339972 + 198 7223 9.4 65 hypothetical membrane protein 2 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf502 339969..340202 + 234 8969 5.1 77 hypothetical protein        orf503 340204..340665 + 462 17599 4.4 153 hypothetical protein        

orf503A 341071..341184 + 114 4193 8.9 37 hypothetical protein        orf504 341317..342117 + 801 31187 4.7 266 hypothetical protein        orf505 342177..343175 + 999 39095   332 hypothetical protein        orf506 343241..343765 + 525 19460 5.1 174 hypothetical protein        orf507 343775..344578 + 804 30931 4.5 267 hypothetical protein        orf508 344646..345143 + 498 19203 8.4 165 HNH endonuclease AGC35033 hypothetical protein

[Escherichia phage PBECO4]; PF01844.17 HNH

3.75E-08 2qgp HNH endonuclease {Geobacter metallireducens gs-15}

1.90E-08

orf509 345146..345463 + 318 12345 9.1 105 hypothetical membrane protein 3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf510 345463..346674 + 1212 45597 5.1 403 conserved hypothetical protein NP_803774.1 ORF208 [Pseudomonas phage phiKZ]; PF00004.23 AAA

2.05E-32 2x8a Nuclear valosin-containing protein-like {Homo sapiens}

3.90E-12

orf511 346727..346912 + 186 7126 4.9 61 hypothetical protein        orf512 346912..347178 + 267 10620 9.6 88 hypothetical protein        orf513 347171..347347 + 177 6767   58 hypothetical protein        orf514 347325..347492 + 168 6296   55 hypothetical protein        orf515 347526..347798 + 273 10343 9.8 90 structural protein MS      orf516 347844..348623 + 780 30706 9.2 259 HNH endonuclease NP_944871 phage conserved

protein; putative endonuclease VII [Enterobacteria phage Felix 01]

7.52E-23    

orf517 348764..349222 + 459 16857 8.4 152 hypothetical protein        orf518 349219..350403 + 1185 45572 6.2 394 conserved hypothetical protein NP_700406 hypothetical protein

sb33 [Salmonella phage ST64B]; PF03235.8 DUF262

8.84E-05    

orf519 350624..351457 + 834 32297   277 putative DNA N6-adenine methyltransferase

YP_007348556 putative DNA N6-adenine methyltransferase [Escherichia phage phAP EC8]

3.11E-46 2ih2 Modification methylase TAQI; DNA, DNA methyltransfer-

9.60E-11

ase {Thermus aquaticus}

orf520 351544..352458 + 915 35487 9.3 304 conserved hypothetical protein AGC35033 hypothetical protein [Escherichia phage PBECO4]

2.53E-18    

orf521 352731..353513 + 783 29256 6.0 260 nrdC.10 hypothetical protein AGC34984 hypothetical protein [Escherichia phage PBECO4]

3.44E-78 3co5 Putative two-component system transcriptional RES regulator {Neisseria gonorrhoeae}

9.30E-05

orf522 353515..353838 + 324 12470 9.0 107 hypothetical membrane protein 3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf523 353850..354209 + 360 13427 9.4 119 hypothetical membrane protein 3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf524 354221..354985 + 765 29018 8.8 254 hypothetical protein        orf525 355031..355384 + 354 13554 8.2 117 hypothetical membrane protein 3 transmembrane domains shown

using TMHMM 2.0 and Phobius     

orf526 355381..355719 + 339 12904 4.6 112 hypothetical membrane protein 3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf526A 355716..356063 + 348 13945 8.7 115 hypothetical membrane protein 3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf527 356060..356404 + 345 12586 9.1 114 hypothetical membrane protein 3 transmembrane domains shown using TMHMM 2.0 and Phobius

orf528 356474..356752 + 279 10695 4.6 92 hypothetical membrane protein 1 transmembrane domains shown using TMHMM 2.0 and Phobius

orf529 356806..357429 + 624 22518 9.3 207 conserved hypothetical protein YP_007007472 hypothetical protein RaK2_00317 [Enterobacteria phage vB_KleM-RaK2] ; PF06693.5 DUF1190

1.74E-38    

orf530 357458..358111 - 654 23409 8.9 217 putative structural protein YP_006986929 hypothetical protein GAP31_094 [Cronobacter phage vB_CsaM_GAP31]; MS

1.00E-24 4dqa Uncharacteriz-ed protein; two domains structure, DUF

6.20E-05

1735, laminin_G_3 concanavalin A- lectin/glucan-ases superfamily domain {Bacteroides ovatus}

orf531 358121..358636 - 516 19184 9.3 171 structural protein YP_006383270 hypothetical protein CR3_255 [Cronobacter phage CR3]; MS

2.84E-09    

189 hypothetical proteins26 hypothetical membrane proteins177 conserved hypothetical proteins 8 conserved hypothetical membrane proteins