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APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Drea

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Page 1: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream

APHL Annual Meeting 2013

Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream

Page 2: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream
Page 3: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream
Page 4: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream
Page 5: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream
Page 6: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream
Page 7: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream

“Because of hype and disappointment… many…have taken a ‘wake me when we arrive’ approach to the field.”—Bowen, et. al., “Public Health Action in Genomics Is Now Needed beyond Newborn Screening,” Public Health Genomics, September 2012

Page 8: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream
Page 9: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream

“It’s exciting, but it’s scary, too. What are we gonna get?” — Carlos Saavedra-Matiz, MD, newborn screening DNA laboratory supervisor, Wadsworth Center

Page 10: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream
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Page 17: APHL Annual Meeting 2013 Whole Genome Sequencing in the Public Health Lab: The Nightmare and the Dream

Is your laboratory currently using Next Generation Sequencingtechnologies either in-house or with a partner?

If yes, what sort of applications are you exploring?

YES32%

NO68%

Foodborne outbreak investigation53%

Other infectious outbreak investigation

71%

Human genomics 12%