applicability of qpcr to ensure the quality of milk and ... · applicability of qpcr to ensure the...

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Applicability of qPCR to ensure the quality of milk and dairy products Bibliography (1) Fusco V., et al., 2010 International Journal of Food Microbiology (144) (2) Ducauze C.J., 2003 Fraudes alimentaires, Approche réglementaire et méthodologie analytique (3) Di Pinto A., et al., 2006 Food Control (17) (4) Riyaz-Ul-Hassan S., et al., 2009 The Journal of dairy research (762) (5) Lees M., 2003 Food authenticity and traceability (6) Scarpellini M., et al., 2004 FEMS Microbiology Letters (236) (7) M. Jodra M., Li E., 1993 International Journal of Food Microbiology (18) Introduction In food processing industry, quality is an unavoidable element, so much for consumers’ health as for organoleptic quality of the products. Milk processing is highly involved because milk is subjected to various contamination sources, before milking (soil, food, water or excrement), during milking (milking people) and after milking (storage, transport or processing). As qPCR is booming, we wondered if it was applicable to ensure the quality of milk and dairy products. Conclusion It has been proven that qPCR is a reliable method, that can be used on various stages of milk processing (just after milking, before and after transport, after industrial processing). qPCR can also be used in other food processing, nevertheless liquids are easier to analyze than solids due to representativeness of the sample (meat, eggs). Organism: Staphylococcus aureus Source: milking people (dirty hands) Effect: food poisoning Detection kit: mericon S. aureus Kit Targeted gene: Egc (enterotoxin gene cluster) 1 Organism: Mycobacterium tuberculosis Source: infected cow Effect: tuberculosis Detection kit: QuantiFast Probe PCR Kits Targeted gene: mpb70 gene 3 Organism: Escherichia coli Source: cow defecations Effect: food poisoning Detection kit : mericon PCR Detection kits Targeted gene: gene uidA 4 Organism: GMO Source: food (silage, corn and soy) Effect: ? Detection kit: mericon GMO detection assays Targeted gene: several sequences are specific to GMO, like the couples Cry03/04, PEP-C2/Btk1, P35S-f2/pétu-r1, IVS2- 2/PatB. 2 Organism: Pseudomonas fluorescens Source: water, soilpopulation increases when storage is too long at 5°C Effect: spoiling (lipolysis, proteolysis) Detection kit: QuantiFast Probe PCR Kits Targeted gene: gene ITS1 6 Organism: Adulteration Source: deliberate, during industrial processing e.g. cow’s milk in other milks (goat, ewe, buffalo) Effect: allergy, lack of quality Detection kit: QuantiFast Probe PCR Kits Targeted gene: cytochrome- b gene (specific to cows) to detect cow’s in goat’s milk. 5 Organism: Aspergillus flavus Source: bottling, food? Effect: secretion of Aflatoxin B1 (carcinogen) Detection kit: QuantiFast Probe PCR Kits Targeted gene: multicopy ITS2 rDNA 7 C. LEMAITRE, E. LABBE , T. RIBEIRO, A. CHANGO, A. M. ABDEL NOUR Institut Polytechnique LaSalle BeauvaisSpécialité Alimentation Santé, promo 010, 19 rue Pierre Waguet, 60026 Beauvais, France E-mail: [email protected] Equipment needed methods common to all organisms as we detect them in milk. For body fluids : QIAamp DNA Blood Mini Kit Rotor-gene Q (Qiagen) qPCR instrument

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Page 1: Applicability of qPCR to ensure the quality of milk and ... · Applicability of qPCR to ensure the quality of milk and dairy products Bibliography (1) Fusco V., et al., 2010 International

Applicability of qPCR to ensure the qualityof milk and dairy products

Bibliography(1) Fusco V., et al., 2010 International Journal of Food Microbiology (144)(2) Ducauze C.J., 2003 Fraudes alimentaires, Approcheréglementaire et méthodologie analytique(3) Di Pinto A., et al., 2006 Food Control (17)(4) Riyaz-Ul-Hassan S., et al., 2009 The Journal of dairyresearch (762)(5) Lees M., 2003 Food authenticity and traceability(6) Scarpellini M., et al., 2004 FEMS Microbiology Letters (236)(7) M. Jodra M., Li E., 1993 International Journal of Food Microbiology (18)

IntroductionIn food processing industry,

quality is an unavoidableelement, so much for consumers’health as for organoleptic qualityof the products. Milk processingis highly involved because milk issubjected to variouscontamination sources, beforemilking (soil, food, water orexcrement), during milking(milking people) and after milking(storage, transport or processing).As qPCR is booming, wewondered if it was applicable toensure the quality of milk anddairy products.

ConclusionIt has been proven that qPCR is areliable method, that can be usedon various stages of milkprocessing (just after milking,before and after transport, afterindustrial processing…). qPCR canalso be used in other foodprocessing, nevertheless liquidsare easier to analyze than solidsdue to representativeness of thesample (meat, eggs…).

Organism: StaphylococcusaureusSource: milking people (dirtyhands)Effect: food poisoningDetection kit: mericon S.aureus KitTargeted gene: Egc(enterotoxin gene cluster)1

Organism: MycobacteriumtuberculosisSource: infected cowEffect: tuberculosisDetection kit: QuantiFastProbe PCR KitsTargeted gene: mpb70 gene3

Organism: Escherichia coliSource: cow defecationsEffect: food poisoningDetection kit : mericon PCRDetection kitsTargeted gene: gene uidA 4

Organism: GMOSource: food (silage, cornand soy)Effect: ?Detection kit: mericon GMOdetection assaysTargeted gene: severalsequences are specific toGMO, like the couplesCry03/04, PEP-C2/Btk1,P35S-f2/pétu-r1, IVS2-2/PatB. 2

Organism: PseudomonasfluorescensSource: water, soil…population increases whenstorage is too long at 5°CEffect: spoiling (lipolysis,proteolysis)Detection kit: QuantiFastProbe PCR KitsTargeted gene: gene ITS16

Organism: AdulterationSource: deliberate, duringindustrial processing e.g.cow’s milk in other milks(goat, ewe, buffalo…)Effect: allergy, lack of qualityDetection kit: QuantiFastProbe PCR KitsTargeted gene: cytochrome-b gene (specific to cows) todetect cow’s in goat’s milk.5

Organism: Aspergillus flavusSource: bottling, food?Effect: secretion of AflatoxinB1 (carcinogen)Detection kit: QuantiFastProbe PCR KitsTargeted gene: multicopyITS2 rDNA 7

C. LEMAITRE, E. LABBE, T. RIBEIRO, A. CHANGO, A. M. ABDEL NOURInstitut Polytechnique LaSalle BeauvaisSpécialité Alimentation Santé, promo 010,

19 rue Pierre Waguet, 60026 Beauvais, FranceE-mail: [email protected]

Equipment needed methods common to all organisms as we detect them in milk. For body fluids : QIAamp DNA Blood Mini Kit Rotor-gene Q (Qiagen)

qPCR instrument