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ArrayExpress – a public database for microarray gene expression data Helen Parkinson Microarray Informatics Team European Bioinformatics Institute MGED

MINUTES – SEPTEMBER 9, 2011coastalbend.edu/uploadedFiles/CBC/Content/Faculty_and_Staff/Facul… · 21/10/2011  · Sent: Monday, October 10, 2011 9:19 AM To: [email protected]

Metagenomics Assembly Hubert DENISE ([email protected])

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data Emma Hastings Functional Genomics Team EBI-EMBL [email protected] emma/Zagreb

Anatomy ontology evaluation @ ArrayExpress

ArrayExpress and Expression Atlas: Mining Functional Genomics data Gabriella Rustici, PhD Functional Genomics Team EBI-EMBL [email protected]

The ArrayExpress Gene Expression Database: a Software Engineering and Implementation Perspective Ugis Sarkans European Bioinformatics Institute

1 MAGE-OM and ArrayExpress database model Ugis Sarkans, EBI

The European Bioinformatics Institute ArrayExpress – a public database for microarray gene expression data Helen Parkinson Microarray Informatics Team

Emily Dimmer [email protected] GOA group European Bioinformatics Institute

ArrayExpress and Gene Expression Atlas: Mining Functional Genomics data Gabriella Rustici, PhD Functional Genomics Team EBI-EMBL [email protected]

Using ArrayExpress. ArrayExpress is an international public repository for well-annotated microarray data, including gene expression, comparative genomic

1 New EMBOSS Web Service Shaun McGlinchey ([email protected])

Www.reactome.org March 2013 1 A Database of human biological pathways Steve Jupe - [email protected]

ILSI-HESI agreement with EBI: ArrayExpress, public repository for toxicogenomics data Susanna Assunta Sansone [email protected] Microarray Informatics

Meta-AnalysisofGrayMatterAnomaliesin Schizophrenia ... · PDF fileMeta-AnalysisofGrayMatterAnomaliesin Schizophrenia:ApplicationofAnatomicLikelihood EstimationandNetworkAnalysis DavidC.Glahn,AngelaR.Laird,IanEllison-Wright,SarahM

Www.reactome.org May 2012 1 A Database of human biological pathways Steve Jupe - [email protected]

ChEMBL – Large-Scale Open Access Data for Drug Discovery John Overington EMBL-EBI [email protected]

MIAMExpress development October 2002 Mohammad shojatalab [email protected]

EnsEMBL Opening up the whole Genome Philip Lijnzaad [email protected]

MIAMExpress development October 2002 Mohammad shojatalab [email protected]

ArrayExpress – a public database for microarray gene expression data

Quality Control Hubert DENISE ([email protected])

Taverna and my Grid Basic overview and Introduction Tom Oinn [email protected]

Www.ebi.ac.uk/arrayexpress EBI is an Outstation of the European Molecular Biology Laboratory. Anatomy ontology evaluation @ ArrayExpress Helen Parkinson,

Introduction to IntAct Pablo Porras Millán, IntAct [email protected]

EBI-MSD’s API Project Siamak Sobhany Email: [email protected] URLs: sobhany

Introduction to Phylogenies Dr Laura Emery [email protected]

MIAMExpress development and local installation DESPRAD Meeting,November 2002 Mohammad shojatalab [email protected]

MIAME, ArrayExpress and the data submission tool MIAMExpress

Peter Rice and Mahmut Uludag EMBOSS as an Efficient DAS Annotation Source Peter Rice, EBI ([email protected]) Mahmut Uludag, EBI ([email protected]) 10th March

1 color vs 2 colors MicroArrays - Bioinformaticsmolsim.sci.univr.it/2011_bioinfo1/MicroArray_Intro_and_visualization.pdf · ArrayExpress Atlas ricerca avanzata Dal menu ‘Experimental

Rafael C Jimenez [email protected]

Master headline RDFizing the EBI Gene Expression Atlas James Malone, Electra Tapanari [email protected]

ArrayExpress A public database for microarray based gene expression data European Bioinformatics Institute EMBL-EBI Alvis