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A Little About the Chemistry of Peroxides (which can fight malaria, by the way) Ramil Baiazitov November 4, 2003 O O Me Me H Me O O O Artemisinin Me Me O O HO OH Me Me Yingzhaosu A

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Page 1: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

A Little About the Chemistry of Peroxides

(which can fight malaria, by the way)

Ramil BaiazitovNovember 4, 2003

O

OMe

Me

HMe

O

O

O

Artemisinin

Me

Me

O

O

HO OH

MeMe

Yingzhaosu A

Page 2: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Natural Peroxy Compounds

O O

n-C16H33

MeO

CO2Me

chondrilline

Fatty acid peroxyketals 1,2-dioxane or dioxolane carboxylates

H

O

O

H

CO2H

mycaperoxide A

Mono- and sesquiterpenes

OOH

isolyratylhydroperoxide A

O

OOH

OH O

OO

CHO

HO

O

O

OO

HOH

HO

HO

OO

OH O

OH

O

O

OH

OHC

H

Page 3: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Facts about Malaria1. Scale *Around 2.5 billion people (at least 40% of the world’s population) are at risk in over 90 countries *Malaria causes or contributes to 3 million deaths and up to 500 million acute clinical cases each year. In other words: almost as many deaths per annum as the AIDS death total in the last 15 years *20 times more deaths each day than deaths from the 1995 EBOLA epidemic in Zaire (~250). *Cause of more military casualties than bullets in every 20th century war in malarious regions *The majority of deaths are children. In other words children are dying at a rate of 4 per minute, 5,000 a day and 35,000 a week. *Other high risk groups include pregnant women, refugees, migrant workers, and non-immune travellers - over 20 million Western tourists at risk annually. *The main areas affected are Africa, South East Asia, India and South America but surveillance and records are too poor to know the real distribution and case numbers. *Malaria is one of leading causes of morbidity and mortality in the developing world (along with TB, acute respiratory syndrome, diarrhoea and HIV) but still not recognised in developed countries as a disaster like AIDS or EBOLA.

2. Resistance *Drug resistance is increasing rapidly, largely due to widespread uncontrolled and unregulated drug distribution. *Drugs have been used until resistance has rendered them ineffective, after which closely related drugs that are introduced show reduced efficacy and severely compromised life spans. *Today, there are few effective anti-malarial drugs - most tropical countries still rely on chloroquine (which is increasingly ineffective) primarily due to cost and the limitation of alternatives. *The vicious circle of new drug resistance limits research and rollout options and increases the cost of R&D - it is hard to establish whether to use new options widely, risking resistance, or keep them in reserve until resistance to existing drugs such as chloroquine or quinine becomes widespread. *Another underlying factor contributing to the development of resistance is the improper usage of the drugs; for example, subcurative doses - people feel better, so stop taking their medicine, and some resistant parasites may be given the chance to survive and be transmitted by mosquitoes. *There is insufficient research into novel drug targets. Current new options are based on the same three families of compounds (the quinolines, antifolates, and artemesinin derivatives) all of which have records of resistance and/or ineffectiveness. Insecticide programmes have also been hampered by the emergence of resistance to DDT and other insecticides.

http://www.malaria.org

Page 4: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Plasmodium falciparum

Anopheles - see how shesits! falciparum: sporozoites

falciparum: exo-erythrocytic schizont

falciparum: merozoitesbud from exo-erythrocytic schizonts

http://www.anaesthetist.com/icu/infect/malpix.htmInternational Journal of Parasitology, 2002, 32, 1537

The infection is caused by a blood-dwelling apicomplexan parasitebelonging to the genus Plasmodium (Plasmodium falciparum,Plasmodium vivax, Plasmodium ovale and Plasmodium malariae causehuman infections). The parasites are transmitted by blood-sucking femaleanopheline mosquitoes (more than 50 species are known vectors).

Malaria chemotherapy have been directed at killing the parasite when it hasinfected human erythrocytes. Starving the malaria parasite by blocking itsdigestion of human haemoglobin (e.g. using protease inhibitors) and poisoningthe malaria parasite by blocking aggregation of toxic haeme into innocuoushaemozoin are two areas of active research.Also, killing the malaria schizonts in human erythrocytes has been achievedeffectively with iron-activated peroxide drugs related to the natural herb-derived antimalarial peroxide artemisinin.

Posner G. H et al, International Journal of Parasitology, 2002, 32, 1661

Page 5: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Some Antimalarial Drugs

WW2 Vietnam War

1000 years ago + Vietnam War

Page 6: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

1,2,4-Trioxane-Type Antimalarial AgentsArtemisinin was isolated as a new antimalarial drug in 1972 in China

Artemisia annua contains <0.1% (under special agricultural conditions)

Poor oil or water solubility

Short plasma half-life

Poor oral activity

O

O

H

O

O

O

Artemisinin

O

O

H

O

O

OR

R=H, Me, Et,

COCH2CH2CO2Na,

CH2C6H4CO2Na

Oil or water solubility

Page 7: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

1,2,4-Trioxane-Type Antimalarial AgentsArtemisinin was isolated as a new antimalarial drug in 1972 in China

Artemisia annua contains <0.1% (under special agricultural conditions)

Poor oil or water solubility

Short plasma half-life

Poor oral activity

O

O

H

O

O

O

Artemisinin

O

O

H

O

O

OR

R=H, Me, Et,

COCH2CH2CO2Na,

CH2C6H4CO2Na

Oil or water solubility

-C-O-O-C-O-C-O-C=O moiety may be responsible for the activity

The interest in cyclic peroxides increased

Page 8: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Ways to Generate Peroxides.

Photo oxidation

http://www.chem.vt.edu/chem-ed/quantum/jablonsk.html

Sens+ hv-------->1Sens1Sens -------->3Sens3Sens+3O2---->Sens+1O21O2+A--->AO2

Ground state 3!g-

First excited 1"g

Second excited1!g+ +37 kcal

+22 kcal

Sentisizer electronic states Oxygen electronic states

O O

Page 9: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Ways to Generate Peroxides.Still Photo Oxidation

Rose Bengal Tetraphenylporphine (TPP)

O

Benzophenone

Sens+ hv-------->1Sens1Sens -------->3Sens3Sens+3O2---->Sens+1O21O2+A--->AO2

Sens+ hv-------->1Sens1Sens -------->3Sens3Sens+3O2---->Sens*O2Sens*O2+A--->AO2

Page 10: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Reactions of Singlet Oxygen

H

+ 1O2

OOH

H

O

O

1. Ene-reaction

2. 1,4-cycloaddition

+ 1O2

O

OO

O

H

H

O

O

1. 1O2

2. LAH

H

H

O

O

OH

CrO3

H

H

O

O

O

64%

Ireland, R.E. et al, JACS, 1970, 92, 5743White, J.D. et al, JACS, 1976, 98, 634Motoyoshiya, J., J. Org. Chem. 1999, 64, 493

1O2OH

OH

OBn

OH

OH

OBn

OO52%

1. Ac2O

2. ! 50%

O

O

OBn

OAc

OAc

crotepoxide

MeAr

Me

Ar

O O

Ar MeO2, TPP

PhH, hv

O O

Ar MeX

Me

Ar

NaClO+H2O2------>NaCl+H2O+1O2

Page 11: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Reactions of Singlet Oxygen 2.Chiral Auxiliary.

Wirth, T., et al. JACS, 1998, 120, 4091

Page 12: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Ways to Generate Peroxides.Ozonolysis

R1

R2

OO

O

O OO

R1 R2

T>-80C

R1

OO

O

R2

R1

OO

O

O

O

R1 R2

DCM,

pentane, etc.

MeOH

R1

OOH

OMe

R1 is more e-rich

O

R2

+

[3+2] retro[3+2]

[3+2]

Bunelle, W.H. Chem. Rev. 1991, 91, 335

Page 13: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Ways to Generate Peroxides.Ozonolysis

Cl

H H O

Cl OO

H H

+O3/MeOH

H H

O3/MeOH

O

O

O

Me MeO

O

H H

+

CH3OCH2OOH

CO + HCl

warmsecondary products

Cl Et

O

MeMe O3/MeOH O

Cl Et

O

MeMe

OO

O

MeO Et

O

MeMe

O OH

+MeO

EtO

Me H O

EtO OO

Me H

+t-BuCHO O

O

O

Me t-Bu

O3

Bunelle, W.H. Chem. Rev. 1991, 91, 335

Page 14: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Ways to Generate Peroxides.Other ways

Feldman, K. S. Synlett, 1995, 217Solaja, B.A. et al, J. Med. Chem., 2002, 45, 3331

Page 15: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Reactions of Peroxides

Dussault, P.H. et al, Tetrahedron Lett., 1995, 36, 3655Dussault, P.H. et al, Tetrahedron Lett., 1999, 40, 6553Dussault, P.H. et al, Org.Lett., 1999, 1, 1391

1/1 mixture

Page 16: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Reactions of Peroxides

R1

R2OMe

O3HO+

n

R2

O

R1

HOO

n

n=1-3 13-67%

O3

R2

O

R1

HOO

n

O

OO

O

O

OR1

R2 n

OHO

O

OR1

R2 n

OOH

1

2

21

+

PPh3

+

R2

O

R1

HOOO

OO

R2

O

R1

HOOOMe

OHO

R2

O

R1

HOO

O

n

n

n

O OMe

R1

OR2O

R2

O

R1

HOO

O

R2

O

R1

HOO

OO

H2C

O

O

H2COnn

pathway 1 pathway 2

Page 17: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Even 8- and 9-membered rings can be made

Nojima, M et al J. Org. Chem. 1997, 62, 4949

Page 18: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 1a

Hofheinz*, W.; Schmidt, G. JACS, 1983, 105, 624

Me

HO H

H2C Me

(-)-Isopulegol1

1. MOMCl, PhNMe2, DCM

2.B2H6, THF

Me

MOMO H

Me

HO H

80%(+epimer 10%)

Me

O H

MeOBn

H

1. BnCl, KH2. HCl, MeOH3. PCC, DCM

1. LDA, THF, 0C2. RI

Me

OH

MeBnO H

Me3Si

H

73%

dr=6/1

62%

Li

OMeMe3Si

THF, -78

Me

HO

H

MeOBn

H

Me3Si

H

X

YSiMe3

quant1 equiv:1/1 10 equiv:8/1 X, Y= OMe, H

89%

1.Li/NH3

2. PCC, DCM

O

O

O

HH

HMe

OO

H

Me

MeQinghaosuArtemisinin

Me

H

Me3Si

H

H

MeO

Me3SiO

MeO

75%

1.mCPBA, DCM

2. TFA, DCM

Me

H

OH

H

MeOMe3Si O

MeO

72%

X-Ray

Page 19: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 1bMe

H

OH

H

MeOMe3Si O

MeO

TBAF, THF, rt

Me

H

OH

H

OMe

HO2C Me

Me

H

OH

MeO

HMe3Si O

MeO

TBAF, THF, rt

Me

H

OH

H

MeO

HO2CMe

H

H

95%

1O2, hv, methylene blue

DCM, rt

MeOH

H

OMe

HO2C MeH

HOOdr=5/1

cis-directing effect of OMe in ene-reaction

>60%

Me

H

OH

H

OMe

NaO2C MeH

1O2, methylene blue

hv, MeOH, -78C

Me

H

OH

MeO

OMe

NaO2C MeH

HOOHCO2H,

DCM, 0C O

O

O

HH

HMe

OO

H

Me

Me

30%QinghaosuArtemisinin

Hofheinz*, W.; Schmidt, G. JACS, 1983, 105, 624

Page 20: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 2a

Avery, M. A. et al JACS, 1992, 114, 974

Me Me

O

Me

(R)-(+)-pulegone

Alkaline H2O2

THF

Me Me

O

Me

O

74%

NaSPh

Me

Me

O

Me

O

SPh

O

Me

SPh

THF

99%

mCPBA

O

Me

SO Ph

95%

1. 2 LDA, HMPA

2. RBr

O

Me

SO Ph

OOAl(Hg)

wet THFO

MeOO

37-50%, dr=9/1for the two steps

Page 21: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 2b

Avery, M. A. et al JACS, 1992, 114, 974

O

MeOO

TsNHNH2

TsNHN

MeOO

86%

4 nBuLi/TMEDA

then DMF

MeOO

O70%

1. TMS-

2. OH->OAcyl

MeOO

O

O

Me3Si

H

Claisen

X

MeOO

O

1. Al(SiMe3)3xEt2O

2. Ac2O/DMAP

MeOO

O

Me3Si

H

O88%

2 LiNEt2

THF, -78->rt

63%

MeOO

OH

Me3Si

H

O

MeOO

O

Me3Si

H

O

Page 22: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 2c

Avery, M. A. et al JACS, 1992, 114, 974

MeOO

OH

Me3Si

O

1. 2LDA, THF, +50C

2. MeI, -78C

MeOO

OH

Me3Si

OMe

H

97%

O3,

DCM, -78C

MeOO

OH

OMe

HO

HOO

SiO2, H2SO4

O

O

O

HH

HMe

OO

H

Me

MeQinghaosuArtemisinin

MeO

OH

OMe

HO

HOO

33-39%

Page 23: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 3a

Yadav, J.S. et al ARKIVOC, 2003, 3, 125http://www.arkat-usa.org/ark/journal/2003/Sukh%20Dev/SD-616C/616C.pdf

Me

Me

Cy2BH

THF, 0C 7 days

Me

MeOH

H

CrO3/Acetone

Me

MeH82%

80%

O

HOdr=68/32

KI, I2, NaHCO3

Me

Me

HO

O

I

70%

Me

Me

HO

O

I

CH2

O

Me + AIBN, PhMe, 110C

Me

Me

HO

O

O

Me

Me

Me

HO

O10%

Bu3SnH or Ph3SnH

Me

MeH

O

HO

Ph2Se2/Br2, DCM

Me

Me

HO

O

PhSe

78%

dr=1/1

AIBN, P

hMe, 1

10C

Bu3SnH o

r Ph3

SnH

Page 24: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 3b

Yadav, J.S. et al ARKIVOC, 2003, 3, 125http://www.arkat-usa.org/ark/journal/2003/Sukh%20Dev/SD-616C/616C.pdf

Me

Me

HO

O

I

CH2

O

Me + AIBN, PhMe, 110C

Me

Me

HO

O

O

Me

Me

Me

HO

O

(Me3Si)3SiH 5%

72%

dr=4/1

O

Me Si(SiMe3)310%

Me

Me

HO

O

O

Me

Me

Me

HO

O

O

Me HS SH

BF3xEt2O

Me

Me

HO

O

Me

SS

98%

1. NaOH/MeOH (50%)

2. CH2N2, Et2O3. PCC, 89%

Me

MeO2C MeH

Me

SS

O

Page 25: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of Artemisinin 3c

Yadav, J.S. et al ARKIVOC, 2003, 3, 125http://www.arkat-usa.org/ark/journal/2003/Sukh%20Dev/SD-616C/616C.pdf

Me

MeO2C MeH

Me

SS

O

Cl

KHMDS, THF, HMPA+50C

Me

MeO2C MeH

Me

SS

MeO

Ph3PCH2OMe HgCl2/CaCO3

45%

dr?

Me

MeO2C MeH

Me

O

MeO80%

1O2, Rose Bengal

MeOH, hv, -78C

Me

MeO2C MeH

Me

O

MeO

OO

HCl (dry)

Me

MeO2C MeH

Me

O

O

HOO

HClO4

O

O

O

HH

HMe

OO

H

Me

MeQinghaosuArtemisinin

10%

Page 26: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

(+)-Yingzhaosu A

Xu, X.-X. et al Tetrahedron Lett., 1991, 32, 5785

Me

O

Me

OH

MeMe

OH

O1

6

4 8

10

12

Yingzhaosu A is an antimalarial constituentisolated from Yingzhao (Artabotrys uncinatus (L.) Merr.)in 1979.

Dioxabicyclo [3,3,1]-nonane ring system,Dihydroxy olefinic side chain.

C1,C4,C6 absolute configuration was knownC8 and C12 were unresolved

Page 27: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of (+)-Yingzhaosu A 1aMe CH2

Me

O

(R)-(-)-carvone

1. mCPBA, DCM

2. BF3xEt2O, PhH

Me CHO

Me

O

Me

Me

O

1. MeMgBr, Et2O, -78C

2. POCl3, Py

15%

1O2, hv, methylene blue

MeCN, TsOH

Me

Me

O

OOH

Me

Me

O

O

O57%dr (C8)=1/1

8

LiBH4

51%

Me

Me

HO

O

O

separable

O3, DCM, DMS

Me

Me

HO

O

O

O

Me

Me

O

O

O

Me

Me

HO

O

O

HO

1. HC(OMe)3

2. POCl3

Me

Me

OMe

O

O

MeO

Xu, X.-X. et al Tetrahedron Lett., 1991, 32, 5785

Page 28: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Total Synthesis of (+)-Yingzhaosu A 1b

Me

Me

OMe

O

O

MeO

1. PtO2, H2(1equiv), EtOAc, 80%

2. TsOH, acetone/water

Me

Me

O

O

O

Ph3AsCH2COC(OH)Me2+Br-

O

HO

Me

Me

O

O

OOH

K2CO3-H2O, DCM

LiBH4

Me

Me

O

O

HOOH

Me

Me

O

O

HOOH

dr=3/2

COCl2/Py

Me

Me

O

O

O O

O

Me

Me

O

O

O O

O

62%

The natural product geometryBy H-NMR and X-Ray

Xu, X.-X. et al Tetrahedron Lett., 1991, 32, 5785

Page 29: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

The absolute structure of (+)-Yingzhaosu A

Me

Me

O

O

HOOH

MeMe

Me

Me

O

O

O O

O

12b

Xu, X.-X. et al Tetrahedron Lett., 1991, 32, 5785

X-Ray of 12b

Page 30: Artemisinin O Me A Little About the Chemistry of Peroxides · A Little About the Chemistry of Peroxides ... OOH isolyratylhydroperoxide A O OOH ... South East Asia,

Conclusions:

• Peroxy compounds are not so rare innature

• They can be very stable to a variety ofchemical conditions

• Many peroxides possess usefulpharmacological properties

• Photo oxygenation and ozonolysis are thetwo major ways to produce them