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EE EManaged Grids and Cloud Systems in theAsia-Pacific Research Community
EE EManaged Grids and CloudSystems in the Asia-PacificResearch Community
Simon C. Lin • Eric YenEditors
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Springer is part of Springer Science+Business Media (www.springer.com)
ISBN 978-1-4419-6468-7 e-ISBN 978-1-4419-6469-4DOI 10.1007/978-1-4419-6469-4
Library of Congress Control Number:
EditorsSimon C. LinAcademia Sinica
Eric YenAcademia Sinica
© Springer Science+Business Media, LLC 2010
Springer New York Dordrecht Heidelberg London
2010928221
Grid Computing and Grid Computing and
Taiwan Taiwan
No. 128, Sec 2. Academia Road No. 128, Sec 2. Academia RoadNan-Gang District, 115, Taipei Nan-Gang District, 115, Taipei
Cloud Computing Centre Cloud Computing Centre
Contents
Part I Grid Activities in Asia Pacific 1
Chapter 1. ............................................................................. Asia Federation Report on International Symposium on Grid Computing 2009 (ISGC 2009) ...........................................................3
Chapter 2. ............................................................................. Research and Deployment a Hospital Open Software Platform for e-
Chapter 3. .............................................................................
Chapter 4. ............................................................................. In Vitro Test for Potential Inhibitors of Plasmepsin II and IV as Anti-
Part II Grid Applications: High Energy Physics, Biomedicine and Life Sciences, Humanities & Social Sciences, Digital Library & Content Management, Environmental Monitoring & Disaster Mitigation & Earth Sciences
Chapter 5. .............................................................................
Chapter 6. ..............................................................................
Chapter 7. ..............................................................................
Chapter 8. .............................................................................. INFN, IT the GENIUS grid portal and the robot certificates to perform phylogenetic analysis on large scale: a success story from
WLCG Node in Pakistan – Challenges & Experiences....................55
malarial Agents.................................................................................67
Performance of a disk storage system at a Tier-2 site ......................85
the International LIBI project.........................................................119
83
Health on the Grid System at VAST/IAMI ......................................39
The PacCAF Grid portal for the CDF experiment ...........................99
Distributed Computing Model for Belle II Experiment .................109
vi Contents
Chapter 9. .............................................................................. Developing a Philippine Cancer Grid. Part 1: Building a Prototype for a Data Retrieval System for Breast Cancer Research Using
Chapter 10. ............................................................................ The ASTRA (Ancient instruments Sound/Timbre Reconstruction
Chapter 11. ............................................................................
Chapter 12. ............................................................................
for Earthquake Research, Monitor and Hazard Reduction
Chapter 13. ............................................................................
Part III Security & Networking
Chapter 14. ............................................................................
Chapter 15. ............................................................................
Part IV
Chapter 16. ............................................................................
Chapter 17. ............................................................................
Chapter 18. ............................................................................ Impact of Advanced Virtualization Technologies on Grid Computing
Medical Ontologies ....................................................................... 131
Application) Project brings history to life!.................................... 145
GRASS GIS in Grid Environment ................................................ 157
Surrounding the South China Sea.................................................. 165
A Data Research Infrastructure for the Arts and Humanities........ 179
193
Environment .................................................................................. 203
Grid Computing and Cloud Computing 217
Implemented via Eucalyptus ......................................................... 219
Centres........................................................................................... 251
Academia Sinica, TW E-science to Assistant Seismic Observations
Review on Concurrent Data Transfer in Grid Computing............. 195
SVOPME: A Scalable Virtual Organization Privileges Management
Elastic Cloud Computing Infrastructures in the Open Cirrus Testbed
Belle Monte-Carlo Production on the Amazon EC2 Cloud........... 231
viiContents
Chapter 19. ............................................................................
Chapter 20. ............................................................................
Chapter 21. ............................................................................
Chapter 22. ............................................................................ Catch-All Virtual Organizations - Solution for Heterogeneous and
Chapter 23. ............................................................................
Part VI
Chapter 24. ............................................................................
Chapter 25. ............................................................................
Part V Operation & Management 265
Disperse Grid Users Communities .................................................299
Grid Middleware & Interoperability 323
GridMate – The Grid Matlab Extension.........................................325
An Interoperable GridWorkflow Management System .................341
Usage of the Open Science Grid ....................................................267
Plans for a German Grid Operations and Support Centre ..............293
GILDA Status and Recent Activities in Grid Training ...................311
Karlsruhe Institute of Technology, DE Grid Support Beyond the Project Life Cycle ...........................................................................281
Program Committee (In Last Name Alphabetic Order)
Kento Aida National Institute of Informatics JP
Eileen Berman Fermi National Accelerator Laboratory USA
Ian Bird CERN CH
Kors Bos NIKHEF NL
Fabrizio Gagliardi Microsoft USA
Atul Gurtu TIFR IN
Robert Jones (Chair) EGEE CH
Daniel Katz Louisiana State University US
Setsuya Kawabata KEK JP
David Kelsey Rutherford Appleton Laboratory UK
Doman Kim Korea Institute of Science and Technology Information KR
Hing-Yan Lee National Grid Office SG
Yannick Legre Healthgrid FR
Simon C. Lin Academia Sinica TW
Satoshi Matsuoka Tokyo Institute of Technology JP
Ludek Matyska CESNET CZ
Klaus-Peter Mickel FZK DE
Reagan Moore SDSC USA
Marco Paganoni INFN IT
Ruth Pordes Fermi National Accelerator Laboratory USA
Peter Rice European Bioinformatics Institute UK
Leslie Robertson CERN CH
Hiroshi Sakamoto University of Tokyo JP
Takashi Sasaki KEK JP
Pansak Siriruchatapong NECTEC TH
Dane Skow Argonne National Laboratory and University of Chicago USA
Geoffrey N. Taylor University of Melbourne AU
Steven Timm Fermi National Accelerator Laboratory US
Sornthep Vannarat NECTEC TH
Alexander Voss NCeSS, University of Manchester UK
Vicky White Fermi National Accelerator Laboratory USA
Bao-Ping Yan Chinese Academy of Science CN
x Program Committee
Contributors First Name Surname Organization Country
Adeel-ur-Rehman National Centre for Physics, QAU Campus, Islamabad PK
Giovanni Aloisio Euro Mediterranean Center for Climate Change (CMCC) & University of Salento
IT
Balamurali Ananthan Tech-X Corporation US
Tosten Antoni Forschungszentrum Karlsruhe GmbH DE
Sajjad Asghar National Centre for Physics, QAU Campus, Islamabad PK
Salvatore Avanzo University of Salerno IT
Roberto Barbera Italian National Institute of Nuclear Physics, Catania/ University of Catania
IT
Christian Baun Forschungszentrum Karlsruhe GmbH DE
Brian Bockelman University of Nebraska-Lincoln US
Vincent Breton LPC Clermont-Ferrand FR
Hsin-Yen Chen Academia Sinica TW
Andrei D Coronel Ateneo de Manila University PH
Francesco De Mattia Conservatory of Music of Parma IT
Giacinto Donvito Italian National Institute of Nuclear Physics, Bari IT
Italo Epicoco Euro Mediterranean Center for Climate Change (CMCC) & University of Salento
IT
Alberto Falzone NICE Sri IT
Marco Fargetta Italian National Institute of Nuclear Physics, Catania IT
Tom Fifield University of Melbourne AU
Stefan Freitag Dortmund University of Technology DE
Gabriele Garzoglio Fermi National Accelerator Laboratory US
Francois Grey UNOSAT, CERN CH
Takanori Hara High Energy Accelerator Research Organization (KEK) JP
Volker Hartmann Forschungszentrum Karlsruhe GmbH DE
First Name Surname Organization Country
Suen Hou Academia Sinica TW
Win-Gee Huang Academia Sinica TW
Bor-Shouh Huang Academia Sinica TW
Soon-Wook Hwang Korean Institute of Science and Technology Information (KISTI) KR
Tadaaki Isobe University of Tokyo JP
Thomas Jejkal Forschungszentrum Karlsruhe GmbH DE
Hee-Kyoung Kang Chonnam National University KR
Nobuhiko Katayama High Energy Accelerator Research Organization (KEK) JP
Do-Won Kim Gangneung-Wonju National University KR
Doman Kim Chonnam National University KR
Jan Kmuníček CESNET z. s. p. o CZ
Jaroslav Koča Masaryk University CZ
Daniel Kouřil CESNET z. s. p. o CZ
Petr Kulhánek Masaryk University CZ
Marcel Kunze Forschungszentrum Karlsruhe GmbH DE
Giuseppe La Rocca Italian National Institute of Nuclear Physics, Catania IT
Tran Van Lang VAST-IAMI VN
Shiann-Jong Lee Academia Sinica TW
Tanya Levshina Fermi National Accelerator Laboratory US
Wen-Tzong Liang Academia Sinica TW
Simon C. Lin Academia Sinica TW
Giorgio Pietro Maggi Italian National Institute of Nuclear Physics, Bari IT
Usman Ahmad Malik National Centre for Physics, QAU Campus, Islamabad PK
Tetsuro Mashimo University of Tokyo JP
Hiroyuki Matsunaga University of Tokyo JP
Luděk Matyska CESNET z. s. p. o CZ
Luciano Milanesi Institute for Biomedical Technologies – CNR IT
xii Contributors
First Name Surname Organization Country
Maria Mirto Euro Mediterranean Center for Climate Change (CMCC) & University of Salento
IT
Suhaimi Napis Universiti Putra Malaysia MY
Mohamed Othman Universiti Putra Malaysia MY
Marco Passante University of Salento IT
Sabine Reißer Karlsruhe Institue of Technology DE
Hiroshi Sakamoto University of Tokyo JP
Rafael P Saldana Ateneo de Manila University PH
Diego Scardaci Italian National Institute of Nuclear Physics, Catania IT
Martin Sevior University of Melbourne AU
Igor Sfiligoi Fermi National Accelerator Laboratory US
Ana Silva UNITAR/UNOSAT CH Muhammad Farhan Sjaugi Universiti Putra Malaysia MY
Mariapaola Sorrentino DANTE, City House, Cambridge/ Conservatory of Music of Salerno
UK/ IT
Zora Střelcová Masaryk University CZ
Michael Sutter Forschungszentrum Karlsruhe GmbH DE
Ngo Anh Tuan VAST-IAMI VN
Dao Van Tuyet VAST-IAMI VN
Ikuo Ueda University of Tokyo JP
Saverio Vicario CNR – ITB Bari IT
Domenico Vicinanza DANTE, City House, Cambridge/ Conservatory of Music of Salerno
UK/ IT
Nanbor Wang Tech-X Corporation US
Eric Yen Academia Sinica TW
xiiiContributors
