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    BACTERIAL INFECTIONS

    OF URINARY RTACT

    ByDr. Marwa Salah

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    Learning objectives1. List names, major structural features, pathogenic

    mechanisms, clinical signi cance & laboratory diagnosisof the main bacteria that cause urinary tract infection.

    2. Outline structure, pathogenesis, clinical signi cance andlaboratory diagnosis of the following bacteria asuropathogens:

    • Escherichia coli• Klebsiella pneumonia• Staphylococcus saprophyticus• Proteus mirabilis• Serratia marcescens• Enterococcus faecalis

    . !escribe structure, pathogenesis, clinical signi cance &laboratory diagnosis of Pseudomonas aeruginosa asuropathogen

    References• Monica Cheesbrough, District laboratory practice in tropical

    countries, part 2, 2 nd edition, 2006• Ja et!, Melnic" # $delburg, Medical %icrobiology, 2& th ed', 20(0• )ayser,Medical Microbiology, 200&

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    BACTERIAL INFECTIONS OF URINARYRTACT

    *acteria Majorstructuralfeatures

    pathogenesis

    Clinicalsigni+cance

    Labdiagnosis

    Escherichi a coli

    -ve%otilebacilli

    $dhesins.ae%olysin

    s) antigen

    / 1 •M 3•4uantitativeurine culture

    Klebsiella pneumoni a

    -venon5%otilebacilli

    Capsule / 1 •M 3•4uantitativeurine culture

    Proteusmirabilis

    -ve%otilebacilli

    $dherence/reaseMotility

    / 1 •M 3•4uantitativeurine culture

    Serratia 5ve $dherence / 1 •M 3

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    ther bacteria that %ay cause / 1• S aureus• ther coagulase negative staphylococci• B fragilis• M tuberculosis

    7redisposing factors of / 1• 8hort fe%ale urethra• 8e9ual intercourse• 8enile prostatic hypertrophy• 8tructural # neurological abnor%alities of

    / hich are associated ith residualurine :inco%plete e%ptying of bladder;

    • Catheteri!ation• .ost factors as DM # i%%unosuppression

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    Escherichia coli

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    Anti%enic st'(ct('eSerological classification of E. coli is based on:

    !" O /somatic1 anti%en of the cell wall lipopolysaccharide(LPS)

    2" / la%ella'1 anti%en3. Capsular (K) antigen in capsulated strains

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    atho%enesis• 0ost +'e$ominant ac(ltati&e anae'o8e in la'%e intestine o man• 'o&i$es +'otection a%ainst ha'm (l mic'oo'%anisms• One o the im+o'tant in$icato's o aecal +oll(tion o *ate'9since it is constantl. o(n$ in h(man ) animal aeces /8esi$es E.

    faecalis ) Cl. Perfringens 1

    i'(lence Facto's o ('o+atho%enic st'ains!"U'o+atho%enic st'ains ha e im8'ial a$hesins, e#oto#ins

    /haemol.sins1 an$ : anti%en2"L S causes endoto!ic shoc"

    ;iseases Ca(se$ 8. E. coli !"U'ina'. t'act in ection /UTI12"Neonatal menin%itis" +ne(monia, se+sis, se+ticaemia )en$oto#ic shoc5

    3";ia''hoea by diarrhaeogenic strains

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    U'ina'. T'act In ection /UTI1Comm(nit. ac

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    La8o'ato'. ;ia%nosisA" S+ecimen ('ine

    U'ine Sam+le collection

    B" ;i'ect $etection0ic'osco+.

    =et mo(nt +(s cells, motilit. test

    >'am staine$ smea'

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    C" C(lt('eU'ine should be uantitati ely

    cultured to deter,ine si%ni icant8acte'('ia /!? @ CFU ml1

    ;" I$enti ication!" Colon. mo'+holo%.2" >'am stain3" O#i$ase test4" Biochemical 'eactions

    In vitro s(sce+ti8ilit. to anti8iotics/ because of e,ergence of resistantstrains)

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    KLEBSIELLA

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    •Ente'o8acte'iacaea•Im+o'tant mem8e's a'e K. ne!"oniae ,

    K. o#aenae , K. r$inosclero"atis ) K. o%&toca / K " ne!"oniae is the me$icall. mostim+o'tant s+ecies1

    0o'+holo%. >'am ne%ati&e 8acilli, non motile,ca+s(late$ /ca+s(le is the most im+o'tant&i'(lence acto'1

    C(lt('e•

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    Biochemical Reactions:le8siella e'ments s(%a's *ith +'o$(ction

    o aci$ ) %asI0 C is --

    atho%enesis•ha8itats /!1 the en&i'onment in s(' ace *ate', se*a%e, soil) on +lants /21 m(cosal s(' aces o intestinal ) 'es+i'ato'.

    t'acts

    • 0(lti $'(% 'esistant Kle'siella st'ains ma.+'e&ail in hos+itals ) ca(se se'io(s

    nosocomial in ections

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    ;iseases /Comm(nit. o' os+ital ac

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    La8o'ato'. ;ia%nosisA"S+ecimens ('ine

    B" ;i'ect $etection0ic'osco+.

    =et mo(nt +(s cells, motilit. test>'am staine$ smea'

    C" C(lt('e ) I$enti ication /similar to E. coli)

    U'ine co(nt

    In vitro s(sce+ti8ilit. to anti8iotics

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    Proteus mirabilis

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    • 1%portant species include Pr ' mirabilis ,Pr ' Vulgaris

    • Providencia rettgeri # M ' morganii areclassi+ed as ne genera

    Morphology• ra%5negative bacilli, %otile,

    usually pleo%orphic

    Cultural characters•

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    *ioche%ical reactions•Lactose non5fer%enter :L

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    Serratia "arcescence

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    3nterobacteriacaeaMorphology

    5ve bacilli

    Culture8o%e strains produce red pig%ent # are used fortesting eGciency of bacterial +lters

    7athogenesis # clinical signi+cance"

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    PSEUDOMON S E!U"#NOS

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    MorphologyG –ve motile bacilli

    Cultural characters•Aerobic, 24h, ! oC "ca# growi# 42 oC$•Simple me%ia& #utrie#tagar' gree#ish e(opigme#t

    "yellow pyover%i#)bluepyocya#i#$, grape*li+e o%our •Some are *haemolytic

    •MacCo#+ey agar& - /

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    *ioce%ical reactions• on5fer%entative :acid is

    produced fro% glucose onlyo9idatively;

    • 9idase ve

    7seudo%onas is not an7seudo%onas is not an3ntrobacteriacaea as it is3ntrobacteriacaea as it isaerobic, non5fer%entative #aerobic, non5fer%entative #o9idase veo9idase ve

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    7athogenicity• Forld ide, part of nor%al Hora• ro s in %oist environ%ents• .ighly resistant to antibiotics # disinfectants• 1n hospitals :nosoco%ial infection;• 8igni+cant hu%an pathogen particularly in

    i%%unoco%pro%ised

    • Eirulence factors@ invasive, to9igenic # pyogenic('7ili@ attach%ent2'L78@ endoto9in='3n!y%es@ elastase, protease, t o hae%olysins?'39oto9in $@ tissue necrosis

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    Co%%unity5acIuired

    infections•

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    $' 8peci%en@ urine

    *' Direct detection

    C' Culture@

    D' 1denti+cation@('Colony %orphology

    2' ra% stain=' 9idase test # other

    bioche%ical reactions?'7hage # pyocin typing for

    epide%iological purposes#n vitro susceptibility to

    antibiotics

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    Staph$lococcussaproph$ticus

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    • #oagulase $%e staphylococci

    • annitol fermentation is%ariable, usually fermenter onmannitol'salt agar

    • (on'haemolytic on blood agar

    • !i)erentiated from Sepidermidis in beingno%obiocin resistant

    • *econd to E coli as a cause of+ - in se ually acti%e youngfemale

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    Enterococcus faecalis

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    • E faecalis causes /0' 3 ofenterococcal infections, E faecium causes 0'1 3

    Morphology• 4ram 5%e cocci, single, pairs or

    short chains

    Cultural characters• 67, can grow in 1 '80 o#• 4row in broth containing 9.0 3

    (a#l• (on'haemolytic, occasionally

    alpha'haemolytic• L6 on ac#on ey

    E faecalis in NaCl 6.5%

    S pyogenes in NaCl 6.5%

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    *ioche%ical reactions• .ydrolyse esculin in presence of

    bile salts

    • Catalase -ve• 7 R ve

    $ntigenic structure• Most strains react ith Lance+eldgroup D antibodies

    7athogenesis7art of nor%al intestinal Hora$ntibiotic resistant@ resistant to

    penicillin # vanco%ycin, K5lacta%ase production

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    Clinical diseases.ospital acIuired rather than co%%unity

    acIuired :particularly in 1C/;• /rinary tract infection@ the %ost

    co%%on• 1ntra5abdo%inal or pelvic ound

    infection• *actere%ia, endocarditis, %eningitis,

    peritonitis, osteo%yelitis, abscesses,

    ound infection