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Basics of NMR Shashank Deep

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Page 1: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Basics of NMR

Shashank Deep

Page 2: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

NMR

• Absorbed photon promotes a nuclear spin from its ground state to its excited state.

• The degeneracy of the energy levels is lifted by the interaction of nuclear dipole

moment with an intense external magnetic field.

• Excitation of transitions between energy

levels is stimulated using radio-frequency electromagnetic radiation.

Page 3: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Difference with other spectroscopy

• The generation of the ground and excited NMR

states requires the existence of an external

magnetic field.

• NMR excited state has a life time that is on the

order of 109 times longer than the lifetime of

excited electronic states.

• According to Heisenberg Uncertainty principle,

ΔEΔt ≈h/2π. The longer an excited state exist,

the narrower the line width.

Page 4: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Difference …..

• Longer lifetime also facilitates multi-dimensional spectroscopy by allowing the resonance frequency information

associated with one spin to be passed to another.

• The longer life-time permits the

measurement of molecular dynamics over a wide-range of time scales.

Page 5: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 6: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

rvmJ

All nucleons, that is neutrons and protons, composing any

atomic nucleus, have the intrinsic quantum property of spin.

As the name

suggests, spin

was originally

conceived as the

rotation of a particle around

some axis. This

picture is correct

so far as spin

obeys the same mathematical

laws as

quantized

angular

momenta do.

Page 7: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Since these particles are also charged, one expects a magnetic

field will be induced

Page 8: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Magnetic moment

JJm

e

rA

er

ci

Qx

c

t

Qi

cdx

dQ

dt

dQi

Ai

avg

2

.2

.

2

Page 9: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Gyromagnetic ratio

The gyromagnetic ratio g determines the ratio of

the nuclear magnetic moment to the nuclear spin.

•It is a fundamental property of each nuclear isotope

Page 10: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 11: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 12: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 13: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 14: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 15: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Hz)(in

1)-s rad(in

Hz)(in

1)-s rad(in

0

0

0

0

0

0

m

m

BmE

mI

IH

IH

IBH

m

mmZ

Z

Z

Z

Page 16: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 17: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 18: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

No field

X Y

Z

Apply field wait

X Y

Z

X Y

Z

With field not at equilibrium With field at equilibrium

Bulk Magnetization

Page 19: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Larmor precession

Ma

gn

eti

c fi

eld

Z

X Y

Tip away magnetization from the Z-axis

Page 20: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Nuclear spins

precess in a magnetic field • Nuclear spins precess

because:

1. they are magnetic

2. they have angular

momentum

• Precession frequency =

Larmor frequency

• Negative γ = positive

sense of precession

• Positive γ = negative

sense of precession

Page 21: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 22: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Larmor Precession

Page 23: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Z

X Y

Apply RF Field

Page 24: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Two counter-rotating field is equivalent to field

oscillating along the x-axis (RF field)

Page 25: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 26: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Larmor frequency in rotating frame

Page 27: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

The effective field

Page 28: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

On-resonance pulse

Page 29: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Effect of On-line pulse

Page 30: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Organic Structure Analysis, Crews, Rodriguez and Jaspars

ONE-PULSE SEQUENCE

1H

(90o)x

Preparation Detection

Page 31: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 32: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 33: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Organic Structure Analysis, Crews, Rodriguez and Jaspars

Mo

x

y

z

Bo

Excess of spin

population along

the direction of

applied magnetic

field.

(90o)x

x

y

z

Bo

After 90o

pulse

magnetization

is tipped into

the xy plane.

M

time t2

M=Magnetization which

produces the FID. It decays

as magnetization in xy

plane diminishes after

resonance

FT

frequency f2

preparation detection

ONE-PULSE SEQUENCE

Page 34: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Effect of pulses

Page 35: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

X

Y

X

Y

Mx

My

time = 0

time = t

Mx My

time time

Page 36: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 37: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 38: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 39: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Fourier transformation (transformation of time-domain data to frequency domain)

Two key idea

(i) Any time-domain function can be represented by the sum of cosine waves of different frequencies and amplitude.

(ii) Cosine waves are orthogonal to each other, i.e. integral, taken between t=0 and t = ∞, of the product of any two cosine waves of different frequency is zero.

Page 40: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Cosine wave of 15 Hz

cosine wave of 15 Hz

-1.5

-1

-0.5

0

0.5

1

1.5

0 6 12 18 24 30 36 42 48 54 60 66

TIME (t/15)

AM

PL

ITU

DE

Page 41: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Multiplication of cosine wave of 15 Hz with cosine

wave of different frequency

Multiplication by 5 Hz

-1.5

-1

-0.5

0

0.5

1

1.5

0 6 12 18 24 30 36 42 48 54 60 66

time (t/15)

Am

pli

tud

e

Multiplication by 10 Hz

-4

-3

-2

-1

0

1

2

0 6 12 18 24 30 36 42 48 54 60 66

time ( t/15)

Am

pli

tud

e

Multiplication by 15 Hz

-2

-1

0

1

2

0 6 12 18 24 30 36 42 48 54 60 66

time (t/15)

Am

pli

tud

e

Multiplication by 20 Hz

-2

-1.5

-1

-0.5

0

0.5

1

1.5

0 6 12 18 24 30 36 42 48 54 60 66

time (t/15)

Am

pli

tud

e

∑ A= - 0.97 ∑ A= - 3.24

∑ A= 30.98 ∑ A=-4.91

Page 42: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Fourier Transformation of complex

signal

22

22

)(

RD

R

RA

FT

Page 43: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

22

22

)(

RD

R

RA

Height of the peak at

R

S1

When R

S2

R- ,2/1 R

Width at half height = 2R

Page 44: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 45: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Phase correction

Page 46: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Phase correction

Page 47: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Second order phase correction

Page 48: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Sensitivity Enhancement

Page 49: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Sensitivity Enhancement

Page 50: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 51: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Resolution enhancement

Page 52: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Optimum

Page 53: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 54: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Sine-bell function

Page 55: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Zero-Filling

Page 56: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Hard pulse

Page 57: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

The effective field

Page 58: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 59: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 60: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states

Pulse calibration

Page 61: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states
Page 62: Basics of NMR - ERNETweb.iitd.ernet.in/~sdeep/NMR_1D.pdfNMR excited state has a life time that is on the order of 10 9 times longer than the lifetime of excited electronic states