bayer data science meetup

49
Building Bridges with Data Visualization Nils Gehlenborg, PhD HARVARD MEDICAL SCHOOL DEPARTMENT OF BIOMEDICAL INFORMATICS @ngehlenborg http://gehlenborglab.org

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Page 1: Bayer Data Science Meetup

Building Bridges with Data VisualizationNils Gehlenborg, PhD

HARVARD MEDICAL SCHOOL DEPARTMENT OF BIOMEDICAL INFORMATICS

@ngehlenborghttp://gehlenborglab.org

Page 2: Bayer Data Science Meetup

01001010101001101010101010101011111100100000111001011101001010111110100011111010000110101010010110101010001011101000010101010101010101011101010100

http://gehlenborglab.org

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!01001010101001101010101010101011111100100000111001011101001010111110100011111010000110101010010110101010001011101000010101010101010101011101010100

http://gehlenborglab.org

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!01001010101001101010101010101011111100100000111001011101001010111110100011111010000110101010010110101010001011101000010101010101010101011101010100

http://gehlenborglab.org

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!01001010101001101010101010101011111100100000111001011101001010111110100011111010000110101010010110101010001011101000010101010101010101011101010100

http://gehlenborglab.org

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!01001010101001101010101010101011111100100000111001011101001010111110100011111010000110101010010110101010001011101000010101010101010101011101010100

http://gehlenborglab.org

Page 7: Bayer Data Science Meetup

Engadget

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U.S. SmartPhone Marketshare

RIMApplePalmMotorolaNokiaOther

Page 9: Bayer Data Science Meetup

U.S. SmartPhone Marketshare

21.2%

3.1%

7.4%

9.8%

19.5%

39.0%RIMApplePalmMotorolaNokiaOther

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U.S. SmartPhone Marketshare

0%

10%

20%

30%

40%

3.1

7.49.8

19.521.2

39.0

RIM Other Apple Palm Motorola Nokia

Page 11: Bayer Data Science Meetup

U.S. SmartPhone Marketshare

0%

10%

20%

30%

40%

RIM Other Apple Palm Motorola Nokia

3.1

7.49.8

19.521.2

39.0

19.5

Page 12: Bayer Data Science Meetup

REPORT

experiment

DATA

INSIGHT HYPOTHESIS

interpretation

hypothesis generation

Page 13: Bayer Data Science Meetup

REPORT

experiment

DATA

INSIGHT HYPOTHESIS

interpretation

hypothesis generation

PRESENTATION“Storytelling”

Page 14: Bayer Data Science Meetup

REPORT

experiment

DATA

INSIGHT HYPOTHESIS

interpretation

hypothesis generation

EXPLORATION

PRESENTATION“Storytelling”

“Pattern Discovery”

Page 15: Bayer Data Science Meetup

REPORT

experiment

DATA

INSIGHT HYPOTHESIS

interpretation

HYPOTHESIS

hypothesis generation

EXPLORATION

HYPOTHESIS-DRIVEN DISCOVERY

PRESENTATION“Storytelling”

“Pattern Discovery”

Page 16: Bayer Data Science Meetup

REPORT

experiment

DATA

INSIGHT HYPOTHESIS

interpretation

DATA

hypothesis generation

EXPLORATION

DATA-DRIVEN DISCOVERY

PRESENTATION“Storytelling”

“Pattern Discovery”

Page 17: Bayer Data Science Meetup

InsightEXPLORATION PRESENTATION

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!!Insight

EXPLORATION PRESENTATION

! !Analysts Analysts

Decision MakersPolicy Makers

Citizens…

Page 19: Bayer Data Science Meetup

Nature asked 1,576 researchers if there is a reproducibility crisis in science.

M Baker, Nature 533, 452-454, 2016

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0% 100%

No crisis (3%)

Don’t know (7%)

Slight crisis (38%)

M Baker, Nature 533, 452-454, 2016

Significant crisis (52%)

Nature asked 1,576 researchers if there is a reproducibility crisis in science.

Page 21: Bayer Data Science Meetup

M Baker, Nature 533, 452-454, 2016

Page 22: Bayer Data Science Meetup

M Baker, Nature 533, 452-454, 2016

Page 23: Bayer Data Science Meetup

M Baker, Nature 533, 452-454, 2016

Page 24: Bayer Data Science Meetup

Intentional?

Inability to capture everything?

Inability to communicate everything?

M Baker, Nature 533, 452-454, 2016

Page 25: Bayer Data Science Meetup

Intentional?

Inability to capture everything?Inability to communicate everything?

SOCIAL ISSUE

TECHNICAL ISSUES

M Baker, Nature 533, 452-454, 2016

Page 26: Bayer Data Science Meetup

AND NOW WHAT?

Page 27: Bayer Data Science Meetup

DATA-DRIVEN DISCOVERY

REPORT

experiment

DATA

INSIGHT HYPOTHESIS

interpretation

DATA

hypothesis generation

EXPLORATION

PRESENTATION“Storytelling”

“Pattern Discovery”

Page 28: Bayer Data Science Meetup

DATA-DRIVEN COMMUNICATION

DATA-DRIVEN DISCOVERY

Page 29: Bayer Data Science Meetup

finding figure/videoAuthoringExploration Presentation

DATA-DRIVEN COMMUNICATION

finding figure/videoAuthoringExploration Presentation

Current Model

DATA-DRIVEN DISCOVERY

Page 30: Bayer Data Science Meetup

DATA-DRIVEN COMMUNICATION

finding figure/videoAuthoringExploration PresentationWhat we show.

DATA-DRIVEN DISCOVERY

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DATA-DRIVEN COMMUNICATION

finding figure/videoAuthoringExploration Presentation

What we tell.

DATA-DRIVEN DISCOVERY

Page 32: Bayer Data Science Meetup

DATA-DRIVEN COMMUNICATION

finding figure/videoAuthoringExploration Presentation

What we did.

DATA-DRIVEN DISCOVERY

Page 33: Bayer Data Science Meetup

DATA-DRIVEN COMMUNICATION

track provenance

annotate observations

make sense of observations

tell the story

DATA-DRIVEN DISCOVERY

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DATA-DRIVEN COMMUNICATION

Capture

Label

Understand

Explain

track provenance

annotate observations

make sense of observations

tell the story

C

L

U

E

DATA-DRIVEN DISCOVERY

Page 35: Bayer Data Science Meetup

CLUE

vistories

Authoring

Exploration Presentation

CLUE Model

DATA-DRIVEN COMMUNICATION

DATA-DRIVEN DISCOVERY

Page 36: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 37: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 38: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 39: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 40: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 41: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 42: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 43: Bayer Data Science Meetup

Exploration

Authoring

Presentation

Page 44: Bayer Data Science Meetup

VISTORY = visualization + story + history

Do collaborative data analysis.

Use during peer-review.

Publish with a paper.

Embed in a presentation.

Page 45: Bayer Data Science Meetup

DATA-DRIVEN DISCOVERY

DATA-DRIVEN COMMUNICATION

Page 46: Bayer Data Science Meetup

DATA-DRIVEN DISCOVERY

DATA-DRIVEN COMMUNICATION

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DATA-DRIVEN DISCOVERY

DATA-DRIVEN COMMUNICATION

http://vistories.org

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DATA-DRIVEN DISCOVERY

DATA-DRIVEN COMMUNICATION

http://vistories.org

SAMUEL GRATZL

ALEXANDER LEX

MARC STREIT

Page 49: Bayer Data Science Meetup

DATA-DRIVEN DISCOVERY

DATA-DRIVEN COMMUNICATION

http://vistories.org