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bioinformatics core services, the ibmcp case

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FGHQRTA DEEFMGPSVDYP FMGQRSGYPNMKFGHM NMKFGHQRTACDEEFMGPSVD KACDEEFMGPSVDYPNMKFGHMRSH DEEFMGQRSGYPNMKFGHMRSHGYPNMKAC HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEE YPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQR VDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPN FGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACD DEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTAC SGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEF EEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRT VDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNM GQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPN NMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDE EEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSG MKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVD TACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHG SVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNM SVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDE FGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEF MRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTAC TACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS FGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEE MGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDE ACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTACATCGGGTCAAGCTAAGCGGAAAGAAA GTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTC CTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAA GGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCA AAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGG CAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCA CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAG GGGTCAAAGCTAAGCGGAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGC 10110100100001010111101000110100011101101001000010101111010001 110000101100100001010111101000101101011011101011010101011 0101111110101101010101111110010101010111010111101000 110111010110101010111111010110101010111111000111 0111111000110101000111011010010000101011110 010111111000110110111010110101010111101 0011101011010010111101000111010110 00001011001000010101111010001 011111101011010101011111 01110101101010101111 000110101000111 10111010110 0001011 11 Javier Forment, septiembre 2012 Bioinformatics Core Services: a bridge between biologists and software developers

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Description of the work done at the Bioinformatics Core Service of the Institute for Plant Molecular and Cell Biology (Instituto de Biología Molecular y Celular de Plantas, IBMCP,www.ibmcp.upv.es). The IBMCP is a research center of the Polytechnic University of Valencia (Universidad Politécnica de Valencia, UPV, www.upv.es) and the Spanish Research Council (Consejo Superior de Investigaciones Científicas, CSIC, www.csic.es) of Spain.

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Page 1: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQ

DEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPS

VDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMG

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQ

DEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPS

VDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMG

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQ

DEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPS

VDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMG

QRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSG

YPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNM

KFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPN

MKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDT

ACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGY

PNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMK

ACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQR

SGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRT

ACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTA

CDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPS

VDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYP

NMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSV

DGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGY

PNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTACATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGT

GGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAG

CTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGT

CAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTA

ATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAG

GCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGAT

CGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA101011

0111010110101010111111000110101101001000010101111010001101000111011010010000101011110100011101011010101011111100

1010101011010000101000101010101110000101100100001010111101000101101011011101011010101011111100011010100011101101

0010000101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010

1111110001101011010010000101011110100011011101011010101011111101011010101011111100011101101001000010100001011000

0000010101111010001011010110111010110101010111111000110101000111011010010000101011110100011101011010101011111100

1010101011101011110100010110101101110101101010101111110001101101110101101010101111010111101000111010110100101111

0100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101000111010110100101

1110100011101011010010111101000111010110100101010111000010110010000101011110100010110101101110101101010101111110

0011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101000101101

0110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110001110010101

0111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111101000110111010

1101010101111110101101010101111110010101010111010111101000101101011011101011010101011111100011010110100100001010

1111010001101110101101010101111110101101010101111110001110010101011100001011001000010101111010001011010110111010

1101010101111110001101010001110110100100001010111101000110111010110101010111111010110101010111111001010101011101

0111101000101101011011101011010101011111100011010110100100001010111101000110111010110101010111111010110101010111

1110001110010101011100001011001000010101111010001011010110111010110101010111111000110101000111011010010000101011

1101000110111010110101010111111010110101010111111001010101

Javier Forment, septiembre 2012

Bioinformatics Core Services:

a bridge between biologists and software developers

Page 2: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core Services” boom.

Page 3: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core Services” boom.

Page 4: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core Services” boom.

Page 5: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core Services” boom.

Page 6: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core Services” mission.

Page 7: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core Services” mission.

Page 8: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core Services” mission.

Page 9: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

“Bioinformatics Core” services provided.

- computer infrastructure

- data management

- data analysis

- software development

- bioinformatics consultation

- bioinformatics training

Page 10: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Regular computer skills of experimental researchers.

- Excel

Page 11: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Regular computer skills of experimental researchers.

- BLAST

Page 12: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Regular computer skills of experimental researchers.

- CLUSTAL

Page 13: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Regular computer skills of experimental researchers.

- VectorNTI

Page 14: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: hardware (I).

experiments generating more than 1TB of raw sequencing data

+

temporary files

+

processed data

+

RAM memory-hungry software

=

BIG COMPUTERS NEEDED:

Several TB hard-disk + 32 GB RAM

Page 15: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: hardware (II).

Very high processing time

(days / weeks / months)

300,000,000 sequences + 1/10 second per sequence=

300,000,000 / 10 / 60 / 60 / 24 = 347.22 days

Very high processing time

(days / weeks / months)

Affordable solution: computing clusters

347.22 days / 50 computer nodes = 6.94 days

Page 16: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: network accessibility.

- Science is an international collaborative effort

Page 17: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: operating system

- most bioinformatics tools run under Linux

- computer clusters run Linux

- bioinformaticians use Linux

Page 18: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: software

- high rate of new algorithms, analysis and types of data

- lack of user-friendly software

- required use of command line tools

versus

Page 19: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: direct data manipulation

- FASTA format

Page 20: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: direct data manipulation

- GenBank format

Page 21: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: direct data manipulation

- EMBL format

Page 22: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: direct data manipulation

- fastq format

Page 23: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Modern Biology requirements: programming skills

- Perl

- Python

- R

Page 24: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Biologists must have computer skills...

- progressively included in University programs:

- use of Linux

- programming language

- database query

Page 25: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

… or use centralized core services.

- reusability of hardware and software

- same algorithms and programming skills

- same type of data

- more efficient and cost-effective

Page 26: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Collaboration with bioinformatics research groups.

- some far away from day-to-day requirements

of experimental researchers

- more computer-oriented than

biology oriented

- more interested in tools development than in tools use

- more interested in more academically profitable work

Page 27: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Bioinformatics services provided in the IBMCP

Page 28: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP's Bioinformatics Core: hardware

- IBM OpenPower720 server

4 dual-core Power5 processors

8 GB RAM

1.2 TB of disk storage capacity

- used for intensive calculations with

high CPU,

memory, or

input/output requirements.

Page 29: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP's Bioinformatics Core: hardware

- Bull NovaScale R440 server

2 dual-core Intel Xeon processors

4 GB RAM

16 TB of disk storage capacity

(in disk array cabinet scalable

up to +100TB)

data redundancy

regular backups

- used for disk storage and serving of

webpages,

databases, and

user data files.

Page 30: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP's Bioinformatics Core: hardware

- PC cluster with 25 computing servers

dual-core, dual-processor nodes

quad-core, quad-processor nodes

2 to 32 GB RAM

total number of 138 processors

- used for parallel computation

Page 31: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: infrastructure management

- purchasing, setting up, configuration, administration, use, update,

and improvement of the hardware.

- standard bioinformatics computational environment for the hardware

(Linux, MySQL, PostgreSQL, Perl, Python, Apache, etc.)

- standard bioinformatics tools installation

(BLAST, EMBOSS, PHYLIP, Condor, Avida, RNAfold, ViennaRNA,

alignAce, BioProspector, PAML, ESTScan, HMMER, Lucy, Phred,

PolyBayes, PolyPhred, RepeatMasker, Seqclean, TGICL, CAP3, etc.)

- standard bioinformatics databases download and update

(NCBI nr, PlantTA, TAIR_pep, TAIR_nuc, UniProt, UniRef90, UniVec, etc.)

- advanced users support

Page 32: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 33: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 34: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 35: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 36: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 37: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 38: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 39: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 40: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: websites administration

Page 41: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 42: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 43: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

- EST2uni: an open, parallel tool

for automated EST analysis

and database creation,

with a data mining web interface

and microarray expression

data integration

Page 44: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 45: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 46: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 47: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 48: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 49: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

SNP_207a0.0SNP_209a0.8SNP_214a2.3SNP_215a3.1SNP_216a5.4SNP_217a6.1SNP_219a7.2SNP_222a8.6SNP_223a10.8SNP_225a14.9SNP_227a15.6SNP_229a17.0SNP_230a20.0SNP_233a23.1SNP_234a23.5SNP_244a28.2SNP_237a39.9SNP_238a40.7SNP_239a42.7SNP_241a43.0SNP_242a44.9SNP_247a46.1SNP_252a47.8

SNP_255a60.4SNP_256a62.4SNP_257a63.4SNP_258a66.9SNP_259a69.5SNP_263a70.2SNP_261a71.5SNP_269b72.7SNP_268a74.3SNP_265a75.6SNP_264a78.3SNP_270a79.6

SNP_272a87.9

TOM5997.4

PC129101.6PC030103.5PC031106.0

SL12114.4PC032115.0LEOH127118.1SSR14120.8SNP_275a122.9

TA

0 1 2 3 4 5 6 7 8

3

LEOH343a0.0

SNP_506a20.9SNP_507a23.4SNP_511a28.9SNP_517a30.2SNP_527a30.5SNP_526a34.0SNP_525a36.7SNP_524a38.9SNP_523a40.8SNP_522a42.4SNP_521a43.7SNP_520a45.8SNP_519a48.9SNP_518a53.7SNP_529a56.2SNP_531a57.8SNP_532a58.8SNP_533a60.9SNP_534a63.7SNP_535b64.5SNP_537a69.6SNP_540a72.9SNP_539a73.1SNP_541a75.2SNP_542a75.8SNP_543b77.0SNP_544a80.6SNP_545a83.3SNP_546a84.7SNP_548a88.0SNP_549a88.4SNP_551a93.7

VitC

0 1 2 3 4 5

8

SSR2960.0SNP_276a2.6SNP_278a4.6SNP_279a5.2SNP_280a6.1SNP_281b7.1SNP_282a11.1SNP_283a12.5SNP_286a14.5

SNP_287a18.3SNP_288a18.7SNP_289a20.8SNP_290a22.1SNP_291a24.6

SNP_295a33.8SNP_296a34.3SNP_297b36.1SNP_300a37.3SNP_302a38.8SNP_303a39.9SNP_304a40.4SNP_306a43.3SNP_308a45.3SNP_311a46.6SNP_316a48.1SNP_315a50.2SNP_322a52.0SNP_321a53.1SNP_323a56.5SNP_324a58.8SNP_325a59.6SNP_326a60.9SNP_328a61.5SNP_333a65.5SNP_332a67.2SNP_331a71.0SNP_330a72.6SNP_337a74.8SNP_335a77.9

Lyc0 1 2 3 4 5

4

- Generation of tomato SNP molecular markers:

300,000,000 sequences → 24,000 SNPs → 768 selected

Page 50: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Identification of miRNAs involved in response of Cucumis sativus

to Hop stunt viroid infection

Page 51: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

GoldenBraid, An Iterative Cloning System

for Standardized Assembly of Reusable Genetic Modules

Page 52: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 53: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 54: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 55: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

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IBMCP Bioinformatics Core: projects involved with

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MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

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IBMCP Bioinformatics Core: projects involved with

Page 57: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 58: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 59: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 60: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 61: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Page 62: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: projects involved with

Search for the mutation putatively responsible for the phenotype

showed by a certain Saccharomyces cerevisae strain

- high-throughput sequencing of mutant and wild relative

- mapping to the yeast genome

- search for differences

So many differences...!!!

Page 63: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: external projects involved with

- RNA-Seq transcriptome study of Strongyloides stercoralis,

(for the Department of Cell Biology and Parasitology

of the University of Valencia)

- RNA-Seq transcriptome study of Echinostoma caproni,

(for the Department of Cell Biology and Parasitology

of the University of Valencia)

- RNA-Seq transcriptome study of Chlamydomonas reindhardtii,

(for the Department of Biochemistry and Molecular Biology

of the University of Cordoba)

- Help for some problems with tiling microarray data files

(for the Department of Environmental Biology of the Center

for Biological Research, at Madrid)

Page 64: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: small tasks (ad hoc programming)

- massive BLASTs or other analysis

- preparation of massive data result files to submit to public databases

- preparation of massive data files to use as input to some software

- comparsion of huge gene lists

- search for motifs in complete genomes / transcriptomes

Page 65: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: community management

Page 66: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

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IBMCP Bioinformatics Core: community management

Page 67: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

1010110101010111111001010101011101011110100010110101101110101101010101111110001101011010010000101011110100011

0111010110101010111111010110101010111111000111011010010000101000010110000000010101111010001011010110111010110

1010101111110001101010001110110100100001010111101000111010110101010111111001010101011101011110100010110101101

1101011010101011111100011011011101011010101011110101111010001110101101001011110100011101011010010111101000111

0101101001011110100011101011010010111101000111010110100101111010001110101101001011110100011101011010010111101

0001110101101001010101110000101100100001010111101000101101011011101011010101011111100011010100011101101001000

0101011110100011011101011010101011111101011010101011111100101010101110101111010001011010110111010110101010111

1110001101011010010000101011110100011011101011010101011111101011010101011111100011100101010111000010110010000

1010111101000101101011011101011010101011111100011010100011101101001000010101111010001101110101101010101111110

1011010101011111100101010101110101111010001011010110111010110101010111111000110101101001000010101111010001101

1101011010101011111101011010101011111100011100101010111000010110010000101011110100010110101101110101101010101

1111100011010100011101101001000010101111010001101110101101010101111110101101010101111110010101010111010111101

0001011010110111010110101010111111000110101101001000010101111010001101110101101010101111110101101010101111110

0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

IBMCP Bioinformatics Core: helping people

Page 68: Bioinformatics Core Services, the IBMCP case

MPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSV

DPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACE

EFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMD

TACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRS

GYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHG

YPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRS

GYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFMPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRS

HGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTI

MGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFM

GPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSH

GYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVD

PQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQR

TIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKF

GHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGP

SVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIMMPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGI

MDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGH

MRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHM

RSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHEFMGPSNMKFGHQRTACDEEFMGPSVDGIM

DTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNMKFGHM

RSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFG

HMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFG

HMRSHGYPNMKACDEEFMGPSVDYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACEEFMGPSVDGSHGYPNMKFGH

QRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEDERSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFG

HEFMGPSNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQ

RTIMGPSVDPQDEEFMGQRSGYPNMQRSGYPNMKFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKFGHMTACDEEFMGPSVDGSHGY

PNMKFGHQRTIMGPSVDPQDEEFMGQRMTACDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGHMRSHGYPNMKACDEEFMGPSVDYPNM

KFGHMRSHGYPNMKFGHQRTACDEEFMGPSVDGIMDTACDEEFMGQRSGYPNMKCDEEFMGPSVDGSHGYPNMKFGHQRTIMGPSVDPQDEEFMGQRSGYPNMKFGTAC

ATCGGGTCAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAG

CGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGG

GTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAA

ACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCA

AAGCTAAGCGCTGCTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTG

CTAATCAAAGCTAAGATCGGGTGGGGGTCAAAGCAAAGCTAATCAAAGCTAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTCAAAGCT

AAGCGGAAAGAAAGCTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAAGCTAATCAAACGGGTGGGGGTTAAGATCGGGTGGGGGTCAAAGCTAAGCGGAAGCTAATCA

AACGGGTGGGGGTCAAAGCTAAGCAAAGCTAAGCGCTGCTAATCAAAGCTAAGA1010110111010110101010111111000110101101001000010101111

0100011010001110110100100001010111101000111010110101010111111001010101011010000101000101010101110000101100100

0010101111010001011010110111010110101010111111000110101000111011010010000101011110100011011101011010101011111

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0011100101010111000010110010000101011110100010110101101110101101010101111110001101010001110110100100001010111

10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Bioinformatics Core career: necessary skills

- an intimate knowledge of UNIX-based operating systems

- understanding of a programming language

- an understanding of parallel computing environments

- knowledge of network-based data storage and manipulation

- understanding of database architecture

- knowledge of biology and genome sciences

- ability to derive data analysis

and software requirements

from experimental researchers

Page 69: Bioinformatics Core Services, the IBMCP case

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10100011011101011010101011111101011010101011111100101

Javier Forment, septiembre 2012

Bioinformatics Cores

For more information:

- www.bioinfo-core.org

- myself:

Javier Forment

[email protected]

@javijevi

http://www.bioinfo-core.org/

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