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Bioinformatics Training More info at http://www.bits.vib.be/training Basic bioinformatics Statistics Omics data analysis Programming & IT

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Page 1: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Bioinformatics Training

More info at http://www.bits.vib.be/training

Basic bioinformatics Statistics

Omics data analysis Programming & IT

Page 2: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Scientific Software

Page 3: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Bioinformatics SupportCustomized Training for MA and IPA BioIT Community Building

NGS Data Analysis Statistical Data Analysis

Page 4: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Research Informatics From Data integration to

Data Visualization Data Integrity via ELN

and BioAssay

Page 5: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Research Informatics

Data Visualization with Spotfire Resource Management

Image Processing Scripting

Page 6: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Contact

Address

VIB BITS

Rijvisschestraat 126 3/R

9052 Gent - Belgium

Email: [email protected]

Tel: +32 (0)9 248 16 00

Page 7: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Research Informatics (I)

• Extended ELN modules (BioAssay)

• Registration/Inventory Databases

• Parsing tools (e.g. LIMSLink, Spotfire SciStream)

• Spotfire Server for Data Integration (Visualisation and

Analyses)

• Explore integrative data systems (tranSMART, insilicoDB,

Synapse, etc)

• Resource Management Systems (YouTrack, iLab)

Page 8: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Research Informatics (II)

• Advanced analysis pipelines (Spotfire, R, KNIME tools,

OpenRefine)

• Visualization tools (Spotfire, BioVIZ tools)

• Macros for various languages

• CLC Plugins

• Image Processing Scripting

Page 9: Bioinformatics Training - VIB · Introduction to gene regulation Electronic Lab Notebook introduction Electronic Lab Notebook introduction Basic bioinformatics concepts, databases

Bioinformatics Training

More info at http://www.bits.vib.be/training

19/1 - Gent

23/1 - Gent

26/1 - Gent

9/2 - Leuven

30/1 + 6/2 + 13/2 - Leuven

11/2 + 12/2 + 13/2 - Leuven

27/2 + 6/3 - Leuven

20/3 + 23/3 - Leuven

9/3 + 16/3 - Leuven

2/4 + 3/4 - Leuven

27/3 - Leuven

Analysis of flow cytometry data using FlowJo

Introduction to gene regulation

Electronic Lab Notebook introduction

Electronic Lab Notebook introduction

Basic bioinformatics concepts, databases and tools

Introduction to R

Introduction to the analysis of NGS data

RNA-Seq analysis for differential expression

Gentle, hands-on introduction to Python programming

Introduction to Biopython

qPCR analysis using qbase+


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