brett goldsmith, alexander kane, vaikunth khalap, john coroneus, gregory weiss, phil collins...

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Brett Goldsmith , Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California Irvine Electrical Measurement of Single Molecule Catalysis using Carbon Nanotubes

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Page 1: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Brett Go ldsmith , A l exander Kane , Va i kun th Kha lap , J ohn Coroneus , Gregory We i ss , Ph i l Co l l i n s

Depar tment o f Phys i cs and As t ronomyUn iver s i t y o f Ca l i f o rn i a I r v ine

Electrical Measurement of Single Molecule Catalysis using Carbon Nanotubes

Page 2: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Outline

Single Molecule Sensor Construction

Measurement of Catalysis Reaction Rate

Dynamics of the Bound State

Page 3: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Single Molecule Sensors Ensemble Stochastic

present absent

binding analyte absent present absent

binding analyte absent

Page 4: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Device Construction

ReferenceCounter

Source Drain

PMMAcoating

Electrolytedrop

PMMA

PMMA

Source

Drain

Coroneus, et al. Chem. Phys. Chem. accepted

Goldsmith, et al. Science 2007, 315, 77.

Page 5: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Device Characterization

Page 6: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

The Catalysis Reaction

EDC binds to the carboxyl group on the nanotube.

EDC

+ +

attached EDC urea

The bound EDC perturbs the current in the nanotube.

A reaction with water releases the bound EDC as a mixed urea.

Page 7: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Functionalized CNTs in Buffer

Page 8: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Interaction With EDC

Goldsmith et al. Nano Lett., 8 (1), 189 -194, 2008

Page 9: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Interaction With EDC

Time Bonded Waiting Time

Turnover Time

Page 10: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Single Molecule Rate Constant

Time Bonded Waiting Time

Turnover Time

k-1= 58.9 ± 18.3 s

Page 11: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Bound State Lifetime

k-1= 58.9 ± 18.3 s

Bound State Lifetime:<tbound> = 12.4 ± 2.1 s

Page 12: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Bound vs. Unbound

Page 13: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Dynamics of the Bound State

Page 14: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Energy of a Two Level System

DE = kBT ln(<tlo>/<thi>)

~11% of these states arevery different

Page 15: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Energy of a Two Level System

90%

10%

at experimental pH = 4.5

Page 16: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Reaction Intermediate States

Page 17: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Summary

Dr. Phil CollinsBrett GoldsmithAlex KaneBucky KhalapSteve HuntDanny WanTatyana Sheps

Dr. Gregory WeissJohn Coroneus

ACS-PRF

Goldsmith, et al. Science 2007, 315, 77.

Goldsmith et al. Nano Lett., 8 (1), 189 -194, 2008

Goldsmith et al. JMR, accepted

Coroneus, et al. Chem. Phys. Lett., accepted

Page 18: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Other Samples…

EDC Pthalic Anhydride

JMR…

Page 19: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Timescale of the Two Level System

Page 20: Brett Goldsmith, Alexander Kane, Vaikunth Khalap, John Coroneus, Gregory Weiss, Phil Collins Department of Physics and Astronomy University of California

Amplitude of the Two Level System

The amplitude of the two groups of bound states also differs.

These different bound state properties could be due to the ~10% protonated EDC in solution at our conditions.