change your genes · wearable sensor founda2on 3 mobile applica2ons what it idenfies •that a...
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ChangeYourGenes–ChangeYourLifeSor2ngHopefromHypeinGene2csGlobalWellnessSummit(GWS)
KennethR.Pelle2er,PhD,MDClinicalProfessorofMedicine
ClinicalProfessorofFamily&CommunityMedicineProfessorofPublicHealth
UniversityofArizonaSchoolofMedicineUniversityofCaliforniaSchoolofMedicine,
SanFrancisco(UCSFMed)
Epigene2csEra
• HealthBiomarkersvsDiseasePredicDon
• Genomics
– Studyoftheen#regenome(Sequencing,Mapping&InteracDons)
• Epigenomics
– Studyofpost-translaDonalgeneDcsmodificaDons
• Metabolomics(GeneDcExpression)
– Studyofthecompletesetofmetabolitesorsmallmolecules(MetabolicIntermediates,Byproducts,Hormones,SignalingCompounds)presentinacellororganism
• Microbiome:Studyofallthemicrobesinandonaperson
Epigene2cs:ATripar2teAssay
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SingleNucleo2dePolymorphisms:CommonGene2cVariants
SNPs
• SNPsactasarheostattoexpressorsuppressgeneDcpredisposiDon• GeneDcVariaDon:centraltopersonalizedmedicine
• SNPsinfluencebydiet/nutriDon,stress/meditaDon,radiaDon,physicalandpsychosocial.environment,Rxs,andsenseofpurpose
• >3millionSNPsidenDfied
• EsDmatedpotenDal10+millionSNPsinthehumangenome
• SNPedia:83,452referenceSNPs
A Tripartite Assay Pilot Study Stool Microbiome, Pathogens, and Infectious Agents Among Olympic and Elite Athletes
PURPOSE: Olympic athletes, non-Olympic elite athletes, and other active adults may have genetic and metabolic profiles that are unique. These profiles may contribute to the caliber of their performance, and they may provide keys to understanding select genetic and metabolic conditions.
For further details: Ms Kathrin E. Nikolussi Chief Business Development Officer [email protected]
WhatDoWeTest?
• WholegenomebasemappingusingnextgeneraDonsequencingtechnology
• SNPbasedandwholegenebasedanalyDcsGene2cs
• Morethan100keybloodbiomarkerscoveringallkeyhealthandwellnessproblemsBlood
• Genomesequencingbasedmicrobiomeandmetabolomicsanalysisforupto300keybiomarkersMicrobiome
Gene2cbiomarkerselec2oncriteria:
1. GenebiomarkersarestablefromoneDmeoftesDngtothenextbythesamelaboratory.GenesarestableunlessthereisaspecificintervenDonthataltersthem;
2. ChangescanbemadeintheexpressionofthesegenesbyacDonable,modifiable,selfcarelifestyleintervenDons;
3. ChangescanbedetectedinamaximumDmeframeof10-12weeksalthoughmanychangeinamaberofhoursordays;and
4. Arecommerciallyavailable.
EPIGENESISResearchProject
EPIGENESIS:7PillarsofOp2malHealth
• Methyla2on: Methyl(CH3)moleculeswithgenesonandofftogovernDNAexpression
• Inflamma2on: Acutevs.chronicanddestrucDve
• Oxida2veStress: ExcessiveoxidaDon(PON1andSOD2)
• Detoxifica2on: PhaseoneandPhasetwobreakdownandexcreDonoftoxins
• Immunity: DifferenDateselffromnotselfwithhypo-andhyper-immunity
• LipidMetabolism: GeneDcexpressionsgovernopDmallipidmetabolism
• MineralMetabolism:
Governmetabolismofnutrientsandtraceelementfromwholefoods
Inflamation Moderate
IBD High
Lactose Intolerance Low
Gluton Intolerance Low
There are certain known microbial signatures that are closely associated with a number of conditions. Ut iriure tincidunt consectetuer tation macto immitto praemitto ludus venio. Luptatum minim autem lobortis vindico fatua autem epulae. Dolore paratus olim plaga dolore duis aliquip demoveo importunus importunus defui meus. Ratis roto ad neque wisi ut opto.
Ut iriure tincidunt consectetuer tation macto immitto praemitto ludus venio. Luptatum minim autem lobortis vindico fatua autem epulae. Dolore paratus olim plaga dolore duis aliquip demoveo importunus importunus defui meus. Ratis roto ad neque wisi ut opto.
Phyla LevelRelative Abundance & Diversity
Important Genus & Species Diversity
Relative Abundance
Genus
Diversity
Firmicutes
Bacteroides
Evenness
Richness
Normal
Normal
Moderate
Good
Tenericutes Normal
Bacteroidetes Low
Cyanobacteria LowAmino Acid that aids in…
Proteobacteria Low
Fusobacteria PresentBreaks down food
Actinobacteria Normal
Verrucomicrobia High
Enterobacteriaceae Enterobacteriaceae
HbA1c HbA1c
Ruminococcaceae Ruminococcaceae
Gene GC,rs2282679
Gene GC,rs2282679
Folate Folate
RBC Magnesium RBC Magnesium
Vitamin D Vitamin D
alpha diversity alpha diversity
Example Phenotype Signature Your Signature
Hypothetical Example
Summary Your DataFactors Score Signature Map
Your data compared to Healthy/BaselineFactors
21 % down11 % up5 % downInsignificant DifferenceInsignificant Difference15 % down25 % down
Enterobacteriaceae
HBA1c
Ruminococcaceae
Gene GC, rs 2282679
Folate
RBC Magnesium
Alpha Diversity
Important Factors for this Phenotype
Type2Diabetes
Enterobacteriaceae
HbA1c
Ruminococcaceae
GeneGC,rs2282679presence
2hoursOralintakeBloodGlucose
PPAR-RVitaminD
FasDngBloodGlucose
Microbiome
Gene2csBlood
DATAANALYTICS:GENETICS,BLOOD,ANDMICROBIOME
THEMICROBIOME:KEYTOLIFE
ThereareaboutonetrillionbacterialivingintheGItract,ten2meshigherthanthetotalamountofcellscomposing
thehumanbody.
GItract
Reproduc2vetract
Skin
EyesEars
SystemSummaryFounda2on1
Inges2onSensorFounda2on2
WearableSensorFounda2on3
MobileApplica2ons
Whatitiden2fies• Thataspecificpill,tabletorotheringestedproduct(orcombinaDon)wasingested.
• ComposedandpoweredenDrelyfrommaterialsfoundinthedailydiet.
Whatitsenses• PreciseDme&idenDtyofingesDons.
• CertainphysiologicresponsesandconsumerbehaviorsoverDme.
– HR,HRV,acDvity,sleep,temperature.
• ActsascommunicaDonshubbetweeningestedproductandphone.
Whatitinfluences• Consumerreportedwellnessmetrics.
• CorrelaDonsbetweeningesDonadherence,patchphysiologicmeasures,anddatafromothertelemetricdevices.
• EnablecollaboraDonwithcliniciansandcaregivers.
TrackingAdherenceEnablesCarerstoIden2fyPa2entsWhoNeedHelp
ACCESSIBLE,SIMPLEBLOODCOLLECTION,ANYWHERE
VirtuallypainlessNobigneedlesSimpletouseCanbeself-administered
NocoldchainrequiredEaseofshipping
Anywhere,AnyDmeSampling
Epigene2cs–WhatisKnown
• TripartateAssay:GeneDc,Blood(CBC),andMicrobiome
• GenespredictprobabiliDesnotcertainDes
• BiomarkersofhealthnotdiseasepredicDon
• ApplicaDonsofsinglegene=singlediseaseisverylimited
• GenesworkwithincomplexgeneDcandenvironmentalmatrices
• Humanbaseis@21,000genes–DNAforproteincodingisonly5%ofthisenDregenome=“DarkGenome”
• Genesareturnedonorofflikearheostat
• Geneschange–Whatwedomabers
• Majorityofgenesgovernedbybeliefsandlifestylechoices
• Neanderthalgenesarealiveandwell–StressResponses
1.GeneswithNoDirectMolecularCorrelateinBlood
2.GeneswithDirectMolecularCorrelatesinBlood
3.GeneswithDirectPathway/NetworkCorrelatesinBlood
4.GeneswithClinical&MolecularPhenotypeCorrelates
FOURDISTINCTCLASSES
Genes-CBC