chris eliasmith centre for theoretical neuroscience · current opinion in neurobiology, 25:1-6. ......
TRANSCRIPT
![Page 1: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/1.jpg)
Recent advances in large-scale, integrated neural modeling
Chris EliasmithCentre for Theoretical Neuroscience
University of Waterloo
![Page 2: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/2.jpg)
Have
ACT-R
HBP
Want
neuralmodels
cognitivemodels
neuro-cognitive models
![Page 3: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/3.jpg)
What is the right level?• Are LIF neurons biologically realistic enough/needed at
all?
• How many compartments/ion channels, etc. is the right number?
• How much biological detail do we need?
• Without context, these questions miss the point
• What computational resources are available?
• What is the purpose of the model?
Eliasmith and Trujillo (2013). The use and abuse of large-scale brain models. Current Opinion in Neurobiology, 25:1-6.
![Page 4: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/4.jpg)
Some friction• "...tremendous historic milestone" Modha
• "...a hoax and a PR stunt" - Markram
• "It is highly unethical of Mohda to mislead the public in making people believe they have actually simulated a cat's brain. Absolutely shocking." - Markram
Mohda’s slide
![Page 5: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/5.jpg)
The deeper problem
Complexity without functionMarkram, H., et al. (2015). Reconstruction and Simulation of Neocortical Microcircuitry. Cell, 163(2), 456–492
![Page 6: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/6.jpg)
Our brain model
• Spaun (Semantic Pointer Architecture Unified Network)
• Simulated in Nengo
• 2.5 million neurons
• 8 different tasks
• Including basic perceptual tasks...
Eliasmith et al., Nov. 2012, Science.
![Page 7: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/7.jpg)
![Page 8: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/8.jpg)
And more cognitive tasks...
![Page 9: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/9.jpg)
![Page 10: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/10.jpg)
![Page 11: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/11.jpg)
With no changes to Spaun between tasks...
(8 tasks include: recognition, copy drawing, reinforcement learning, counting, serial working memory, question answering, RVC, RPM)
![Page 13: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/13.jpg)
V1 tuning
![Page 14: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/14.jpg)
Working memory
1 2 3 4 5 6 70
0.1
Item Position
Accu
racy
a) b)
0.5
0.6
0.7
0.8
0.9
1
4 items5 items6 items
1 2 3 4 5 6 70
0.1
Item Position
Accu
racy
0.5
0.6
0.7
0.8
0.9
1
4 items5 items6 items
Data Model
![Page 15: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/15.jpg)
Bandit TaskDelay Approach Reward Return
Time (seconds)
Neu
ron
num
ber
Tria
l num
ber
Freq
uenc
y (s
pike
s/s)
![Page 16: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/16.jpg)
How is it like a brain?
![Page 17: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/17.jpg)
How does it work?
![Page 18: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/18.jpg)
The Semantic Pointer Architecture (SPA)
• Specific functional claims:
• Working memory
• Action selection (BG)
• Motor/perception hierarchies
• Communication protocol:
• Semantic Pointers
• Compressed ‘addresses’ to deep semantic info
Eliasmith (2013), Oxford
![Page 19: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/19.jpg)
Semantic Pointers• E.g. The pointer would be the activity of the top
level of a standard hierarchical visual model for object recognition
• This pointer can then support ‘symbol’ manipulation
• It can also be used toreactivate a full visual representation
Serre et al., 2007 PNAS
![Page 20: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/20.jpg)
• Compress: (spiking DBN)
• Map: (non-sparse -> sparse)
• Compress:
• Recurrence:
• Decompress:
• Map:
• Decompress:
Perception Cognition Action
![Page 21: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/21.jpg)
Neural Engineering
The Neural Engineering Framework (NEF)
• Three principles
• General
• Unified
• Quantitative
• Nengo: A ‘neural compiler’
Eliasmith & Anderson (2003) MIT Press
![Page 22: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/22.jpg)
NEF connection weights
![Page 23: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/23.jpg)
Binding & Memory
![Page 24: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/24.jpg)
“It’s not a brain model” - Henry Markram (Science News, 183(1):13, 2013)
![Page 25: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/25.jpg)
Sounds like a challenge!• Bahl et al., (2012, J. Neuro
Method)
• parameters found by reduction from Stuart & Spruston (1998)
• soma (1 segment); basal dendrite (1 segment); apical dendrite (5 segments)
• 10 different ion channels
![Page 26: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/26.jpg)
![Page 27: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/27.jpg)
![Page 28: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/28.jpg)
![Page 29: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/29.jpg)
Right level of detail?• Depends on your question:
• Effects of channel blockers?
• Large network dynamics?
• Nengo
• Mixed detail models (conductance, point, rate, no neurons; all at once)
• Put computational resources where you need them
• Fast large-scale design and test
![Page 30: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/30.jpg)
Extensions to Spaun• Hierarchical RL (Rasmussen & Eliasmith,
2014)
• Human-scale conceptual representation (Crawford & Eliasmith, 2013)
• Adaptive motor control (DeWolf et al., forthcoming)
• Language parsing, command following (Stewart et al., 2014)
![Page 31: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/31.jpg)
SPA Unifies• Perception
• Statistical categorization, SPs
• Cognition
• Working with structure, SPs
• Action
• Brain/body dynamics, SPs & control
![Page 32: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/32.jpg)
Still a long way to go...
…but I think the NEF, SPA, and Nengo combination can help…
![Page 33: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test](https://reader035.vdocument.in/reader035/viewer/2022062402/5b502b2b7f8b9a2f6e8df103/html5/thumbnails/33.jpg)
Further information
Research, Papers: http://compneuro.uwaterloo.ca
Tutorials, Spaun videos: http://www.nengo.ca