chris eliasmith centre for theoretical neuroscience · current opinion in neurobiology, 25:1-6. ......

33
Recent advances in large-scale, integrated neural modeling Chris Eliasmith Centre for Theoretical Neuroscience University of Waterloo

Upload: truongkhue

Post on 19-Jul-2018

225 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Recent advances in large-scale, integrated neural modeling

Chris EliasmithCentre for Theoretical Neuroscience

University of Waterloo

Page 2: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Have

ACT-R

HBP

Want

neuralmodels

cognitivemodels

neuro-cognitive models

Page 3: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

What is the right level?• Are LIF neurons biologically realistic enough/needed at

all?

• How many compartments/ion channels, etc. is the right number?

• How much biological detail do we need?

• Without context, these questions miss the point

• What computational resources are available?

• What is the purpose of the model?

Eliasmith and Trujillo (2013). The use and abuse of large-scale brain models. Current Opinion in Neurobiology, 25:1-6.

Page 4: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Some friction• "...tremendous historic milestone" Modha

• "...a hoax and a PR stunt" - Markram

• "It is highly unethical of Mohda to mislead the public in making people believe they have actually simulated a cat's brain. Absolutely shocking." - Markram

Mohda’s slide

Page 5: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

The deeper problem

Complexity without functionMarkram, H., et al. (2015). Reconstruction and Simulation of Neocortical Microcircuitry. Cell, 163(2), 456–492

Page 6: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Our brain model

• Spaun (Semantic Pointer Architecture Unified Network)

• Simulated in Nengo

• 2.5 million neurons

• 8 different tasks

• Including basic perceptual tasks...

Eliasmith et al., Nov. 2012, Science.

Page 7: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test
Page 8: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

And more cognitive tasks...

Page 9: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test
Page 10: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test
Page 11: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

With no changes to Spaun between tasks...

(8 tasks include: recognition, copy drawing, reinforcement learning, counting, serial working memory, question answering, RVC, RPM)

Page 12: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

http://nengo.ca/build-a-brain/spaunvideos

Page 13: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

V1 tuning

Page 14: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Working memory

1 2 3 4 5 6 70

0.1

Item Position

Accu

racy

a) b)

0.5

0.6

0.7

0.8

0.9

1

4 items5 items6 items

1 2 3 4 5 6 70

0.1

Item Position

Accu

racy

0.5

0.6

0.7

0.8

0.9

1

4 items5 items6 items

Data Model

Page 15: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Bandit TaskDelay Approach Reward Return

Time (seconds)

Neu

ron

num

ber

Tria

l num

ber

Freq

uenc

y (s

pike

s/s)

Page 16: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

How is it like a brain?

Page 17: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

How does it work?

Page 18: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

The Semantic Pointer Architecture (SPA)

• Specific functional claims:

• Working memory

• Action selection (BG)

• Motor/perception hierarchies

• Communication protocol:

• Semantic Pointers

• Compressed ‘addresses’ to deep semantic info

Eliasmith (2013), Oxford

Page 19: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Semantic Pointers• E.g. The pointer would be the activity of the top

level of a standard hierarchical visual model for object recognition

• This pointer can then support ‘symbol’ manipulation

• It can also be used toreactivate a full visual representation

Serre et al., 2007 PNAS

Page 20: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

• Compress: (spiking DBN)

• Map: (non-sparse -> sparse)

• Compress:

• Recurrence:

• Decompress:

• Map:

• Decompress:

Perception Cognition Action

Page 21: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Neural Engineering

The Neural Engineering Framework (NEF)

• Three principles

• General

• Unified

• Quantitative

• Nengo: A ‘neural compiler’

Eliasmith & Anderson (2003) MIT Press

Page 22: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

NEF connection weights

Page 23: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Binding & Memory

Page 24: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

“It’s not a brain model” - Henry Markram (Science News, 183(1):13, 2013)

Page 25: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Sounds like a challenge!• Bahl et al., (2012, J. Neuro

Method)

• parameters found by reduction from Stuart & Spruston (1998)

• soma (1 segment); basal dendrite (1 segment); apical dendrite (5 segments)

• 10 different ion channels

Page 26: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test
Page 27: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test
Page 28: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test
Page 29: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Right level of detail?• Depends on your question:

• Effects of channel blockers?

• Large network dynamics?

• Nengo

• Mixed detail models (conductance, point, rate, no neurons; all at once)

• Put computational resources where you need them

• Fast large-scale design and test

Page 30: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Extensions to Spaun• Hierarchical RL (Rasmussen & Eliasmith,

2014)

• Human-scale conceptual representation (Crawford & Eliasmith, 2013)

• Adaptive motor control (DeWolf et al., forthcoming)

• Language parsing, command following (Stewart et al., 2014)

Page 31: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

SPA Unifies• Perception

• Statistical categorization, SPs

• Cognition

• Working with structure, SPs

• Action

• Brain/body dynamics, SPs & control

Page 32: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Still a long way to go...

…but I think the NEF, SPA, and Nengo combination can help…

Page 33: Chris Eliasmith Centre for Theoretical Neuroscience · Current Opinion in Neurobiology, 25:1-6. ... Framework (NEF) • Three principles ... • Fast large-scale design and test

Further information

Research, Papers: http://compneuro.uwaterloo.ca

Tutorials, Spaun videos: http://www.nengo.ca