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Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle Physics in Medicine and Biology Vol 44, 1999 Henry Chen May 13, 2011

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Page 1: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Click to edit Master title styleLiterature Review

Single-Slice Rebinning Method forHelical Cone-Beam CT

Frédéric Noo, Michel Defrise, Rolf ClackdoylePhysics in Medicine and Biology

Vol 44, 1999

Henry ChenMay 13, 2011

Page 2: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Click to edit Master title style

Background

Computed Tomography

Page 3: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Tomography

Basis for CAT scan, MRI, PET, SPECT, etc.

Greek “tomos”: part or section

Cross-sectional imagingtechnique using transmissionor reflection data frommultiple angles

Page 4: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Computed Tomography (CT)

A form of tomographic reconstruction on computers

Usually refers to X-ray CT– Positron (PET)– Gamma rays (SPECT)

Page 5: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Cross-Sections by X-Ray Projections

Project X-ray through biological tissue;measure total absorption of ray by tissue

Projection Pθ(t) is the Radontransform of object functionf(x,y):

Total set of projections calledsinogram

, cos sinP t f x y x y t dxdy

Page 6: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

X-Ray Projection Example

Page 7: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Phantom and Sinogram

Shepp-Logan Phantom

Page 8: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

CT Reconstruction

Restore image from projection data

Inverse Radon transform

Most common algorithm is filtered backprojection– “Smear” each projection over image plane

Page 9: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Fourier Slice Theorem

Fourier transform of a 2-D object projected onto a line is equal to a slice of a 2-D Fourier transform of the object

Allows image reconstruction from projection data

Overlay FT of projections in 2-D Fourier domain

If carried out in space domain, becomes backprojection procedure

Page 10: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 11: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 12: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 13: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 14: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 15: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 16: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 17: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 18: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle
Page 19: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Backprojection Result

Need filtering (high-pass), interpolation

Page 20: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

FBP Algorithm

Input: sinogram sino(θ, n) Output: image img(x,y)

for each θfilter sino(θ,*)for each x

for each yn = x cos θ + y sin θimg(x,y) = sino(θ, n) + img(x,y)

O(n3) algorithm– But highly parallelizable, given sufficient memory

bandwidth; not computationally intensive

Page 21: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Click to edit Master title style

Single-Slice Rebinning Methodfor Helical Cone-Beam CT

Page 22: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

3-D Tomography

Construct 3-D image using sequence ofcross sectional images

Requires many passes of ionizing x-ray radiation

Page 23: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Helical Cone-Beam Scanner

Helical traversal reduces total number of passes; increases scanning speed and reduces x-ray exposure

However, need to convertcone-beam data into stackof fan-beam slice images

Page 24: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Rebinning

Maps projection data into fan-beam slices

Virtual fan source mapped to surface of cone source

Each slice requires CB projections from 1 revolution centered on that slice (+/- 0.5P)

Page 25: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Rebinning

Fan-beam “projection” estimated from value of cone-beam projection in same vertical plane

Use closest cone-beam source directly above or below virtual fan-beam source

Use oblique ray passing through M

Page 26: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Rebinning Geometry

Page 27: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Rebinning Equation

Each fan-beam value is just weighted version of cone-beam projection data

2 2

2 2 2, ,z

u Dp u g u v

u v D

2 2u Dv z

RD

fan sino

fan-beam projection length

cone-beam projection length

CB sino

Page 28: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Simulation Comparisons

A: Single detector row (no oblique rays), 5mm pitch

CSH-HS algorithm

B: Seven detector rows, 25mm pitchCB-SSRB algorithm

C: Seven detector rows, 100mm pitchFull 3-D backprojection algorithm

D: Seven detector rows, 100mm pitchCB-SSRB algorithm

Page 29: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Simulation Comparisons

Page 30: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Simulation Comparisons

Page 31: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Performance Comparison

Runtime for (C): 276s CPU, using 27 ray-sums

Runtime for (D): 1310s CPU, using 57 ray-sum

Runtimes for (A) and (B) about equal

Page 32: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

Conclusions

Like all CT, CB-SSRB is not exact; reconstruction artifacts can affect image quality

However, good performance for large-pitch helixes– 5x larger pitch = 5x fewer projection measurements

Selection of oblique rays integral to performance– Need multiple detector rows (7 vs. 1)

Page 33: Click to edit Master title style Literature Review Single-Slice Rebinning Method for Helical Cone-Beam CT Frédéric Noo, Michel Defrise, Rolf Clackdoyle

References

http://en.wikipedia.org/wiki/Tomography

http://en.wikipedia.org/wiki/Computed_tomography

Kak, A. C., Slaney, M., Principles of Computerized Tomographic Imaging, IEEE Press, 1988