coding with dynamic synapses and receptive fields · possible roles of short-term plasticity...

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Benjamin Lindner MPI für Physik komplexer Systeme Dresden André Longtin Jason Middleton, John Lewis, Len Maler Jakub Cieniak, Dorian Gangloff Physics, Cellular and Molecular Medicine Center for Neural Dynamics University of Ottawa Coding with Dynamic Synapses and Receptive Fields Funding by NSERC, CIHR, MPI

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Page 1: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Benjamin Lindner MPI für Physik komplexer Systeme Dresden

André Longtin

Jason Middleton, John Lewis, Len Maler

Jakub Cieniak, Dorian Gangloff

Physics, Cellular and Molecular MedicineCenter for Neural Dynamics

University of Ottawa

Coding with Dynamic Synapses and Receptive Fields

Funding by NSERC, CIHR, MPI

Page 2: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Two Parts

• Both motivated by our work on weakly electric fish

• Two general coding principles

Page 3: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Part 1: Synchrony and Receptive Fields

•Motivation: Electrosensory communication

•Synchrony data

•Neural modeling of decoding

•Synchrony decoded with large receptive fields

Middleton, Longtin, Benda, Maler, J. Neurophysiol. (2009)

Page 4: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Electrosensory system

ElectricOrgan

Weakly electric fish(brown ghost)

Page 5: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

EOD full cycle

From Brian Rasnow, Caltech

Page 6: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Electrosensory Lateral Line Lobe (ELL)

Electroreceptors

PyramidalCell

Higher Brain

Amplitude Modulation (AM)

Krahe and Gabbiani (2004) Nat. Neurosci.Rev. 5:13-23

afferents

Electrolocation

Page 7: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Beat patterns due to neighbors

Page 8: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Parallel Fish

Kelly, Babineau, Longtin, Lewis, Biol. Cybern. 2008

Page 9: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

ELECTRORECEPTORS

• � ALL SPATIO-TEMPORAL SCALES

• The EOD field excites 16,000 cutaneous electroreceptors.

Page 10: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Electrocommunication

Female: EOD <800 Hz Male: EOD >800 Hz

Page 11: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Same gender interactions: Calls synchronize receptors

Benda, Longtin, Maler, J. Neurosci. 2005

Page 12: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Female-Male Interactions: Calls desynchronize receptors

Benda, Longtin, Maler, Neuron 2006

Page 13: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients
Page 14: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

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Ii Ii+1∆∆∆∆w

Leaky Integrate-and-fire Model with Dynamic ThresholdChacron, Longtin, St-Hilaire, Maler, Phys.Rev.Lett. 85, 1576 (2000)

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Page 15: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients
Page 16: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients
Page 17: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

How are changes in synchrony decoded?

Model of receptors

Models of ELL pyramidal cells driven by receptor data

Eventually include short-term plasticity between them

Page 18: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Spectral measuresFourier transform

Cross spectra of synaptic input/voltage and input signal

Coherence functions

Page 19: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Data: synchronous spike coherence

Page 20: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Postsynaptic Decoders

• 3 Somatotopic maps:

• Centro-medial (CMS)

• Centro-lateral (CLS)

• Lateral (LS)

Page 21: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Cerebellar granule cells

ELL

Pyramidal cells

GABA interneurons

LS

CLS

CMS

Electroreceptors

Maps

columns

Page 22: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Receptive Fields

CLS map: intermediate

Electric image

Prey

RF

x

y

z

LS map: large receptive fields=low spatial frequency

CMS map: small receptive fields=high spatial frequency

Page 23: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Mehaffey, et al. (2008)

cohe

renc

e

low-pass

high-pass

Temporal Filtering Properties

Page 24: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients
Page 25: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Neural models:experimental constraints

Neural models:experimental constraints

Different receptive field (RF) sizes:LS - large RFs (high convergence)CMS - small RFs (low convergence)

Different spike thresholds:LS - high threshold (-67mV)CMS - low threshold (-61 mV)

Output firing rates are roughly conserved across maps:LS - 18 HzCMS - 14 Hz

Page 26: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

input

threshold

Neural models: current threshold modelNeural models: current threshold model

Low convergencelow threshold

High convergencehigh threshold

Page 27: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

input

output

voltage

Cdv(t)

dt= IDC − gshunt v(t) − Eshunt( )− gsynx(t) v(t) − EAMPA( )

Conductance-based model

Page 28: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Mehaffey, et al. (2008)

cohe

renc

e

low-pass

high-pass

Temporal Filtering Properties

Page 29: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Synchronous (electro)sensory afferent activity encodes high frequency information

Summed activity encodes all frequencies

Postsynaptic cells with high convergence and high spike threshold preferentially decode synchronous activity

ELL: high convergence map (LS) decodes fast chirps

Other sensory systems (visual: X and Y cells) could consist of parallel streams of different temporal information which are determined by transmission of synchronous activity

SummarySummary

Page 30: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Part 2: Coding with Plastic Synapses

• General properties of short term plasticity• Amplitude-rate picture• Frequency response picture• Spontaneous Poisson activity• Modulated Poisson activity• Controlling Broadband Coding

• Lindner, Gangloff, Longtin, Lewis,

• Broadband Coding with Dynamic Synapses, J. Neurosci. (2009)

Page 31: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Short-term plasticity

1mV

100ms

Change in the synaptic efficacy by incoming spikes

Increase in efficacy = synaptic facilitation

Decrease in efficacy = synaptic depression

Page 32: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Possible roles of short-term plasticity

•input compression (Tsodyks & Markram 1997, Abbott et al. 1997)

•signaling of transients (Lisman 1997, Senn et al. 2000, Richardson et al. 2005)

•switching between neural codes (Tsodyks & Markram 1997)

•spectral filtering (Fortune&Rose 2001, Abbott et al. 1997, Dittman et al. 2000)

•synaptic amplitude can keep info about the presynaptic spike train seen so far (e.g. Fuhrmann et al. 2001)

•redundancy reduction (Goldman et al. 2002)

•sensory adaptation and decorrelation (Chung et al. 2002)

Page 33: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Information transfer

•Need more than synaptic amplitudes

•One also needs accompanying noise

•Noise comes mainly from (asynchronous) inputs

•Need to figure out how synaptic amplitudes and noise depend on time (due to signal)

Page 34: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Facilitation-depression model from experiments

1mV

100ms

Postsynaptic amplitude

Lewis &Maler J. Neurophysiol. (2002,2004)

Page 35: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Facilitation and Depression Dynamics

Page 36: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Trajectories for Poisson stimulus

Page 37: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Model

Poisson input spike trains

F-D

F-D

Synaptic facilitation and

depression

.

.

.

Synapticinput

Page 38: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Conductance and voltage dynamics

Synaptic inputs

Conductance dynamics

Membrane voltage dynamics

Page 39: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Spontaneous activity

Page 40: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Model for spontaneous activity

Page 41: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Map description

input ISI

Facilitiation (for small input rates)

Depression

Page 42: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Mean value for low input rates

Page 43: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Distinction between different regimes

• Facilitation dominated regime (FDR)

• Depression dominated regime(DDR)

At low firing input rate

Page 44: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Distinction between different regimes

When does facilitation dominate? And when depression?

Page 45: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Power spectra

Page 46: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Power spectra

Page 47: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Signal transmission

Page 48: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Model with rate modulation

Modulation of the input firing rate by a band-limited Gaussian white noise (0-100Hz)

Page 49: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

0 < COHERENCE < 1

Page 50: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Input=electrical stimulus Output= ELL spikes

How can one infer receptor-to-ELL plasticity?

Chacron et al., Nat. Neurosci. 2005

C1=C2 C3

Page 51: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Depression alone

Szalisznyo, Longtin, Maler, Biosystems 2008

Page 52: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Facilitation alone

Page 53: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Prediction that D dominates, mixed AMPA+NMDA

Page 54: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Band-limited noise stimulus (0-100Hz)

Page 55: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Cross-spectra

Page 56: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Coherence function DDR

Page 57: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Coherence function FDR

Page 58: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Input: Poisson rate modulationOutput: LIF spikes

Page 59: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Summary‣Analytical results for the spontaneous case permit distinction between different regimes (FDR & DDR)

‣Synaptic input and subthreshold membrane voltage show a flat coherence with rate modulation for both

FDR and DDR-> broadband coding

‣Information transmission about a stationary rate modulation is always reduced by dynamic synapses

‣Coherence can be controlled by LIF mean rate

Page 60: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

Chaos

Special Issue

Page 61: Coding with Dynamic Synapses and Receptive Fields · Possible roles of short-term plasticity •input compression (Tsodyks & Markram 1997, Abbott et al. 1997) •signaling of transients

3rd University of OttawaComputational Neuroscience

Summer School

June 7-20, 2009

http://www.neurodynamic.uottawa.ca