comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. ·...

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V¡rus Research ELSEVIER Virus Research 33 (1994) 99-121 Comparative studies of iridoviruses: further support for a new classification Trevor Williams * NE~C lnstitute of Virology and Environmental Microbiology, Mansfield Road, Oxford, OXI 3SR UK (Received 10 January 1994;revised 15 March 1994; accepted 16 March 1994) Abstract Changes in the classification of invertebrate iridoviruses (IVs) (Iridoviridae) have re- cently been proposed (Williams and Cory, 1994). The previous system of naming isolates according to the host and sequenceof discovery (IV type 1, IV2, IV3, etc.) is not adequate for the purposes of taxonomy, since iridovirus isolates may infect many species, including hosts from diverse invehebrate orders. The new systemof invertebrate iridovirus nomencla- ture, as with several other virus families, is based on geographical origino Proposals have been made, based on DNA hybridization and other characteristics, by which invertebrate iridovirus isolates can be assigned to one of tour recognized complexes, or considered as candidates for alternative assignations.This study reports comparative data on the DNA of 14 invertebrate iridovirus isolates used in the Williams and Cory study plus the two type vertebrate iridoviruses, frog virus 3 and fIounder lymphocystis disease virus. DNA studies support the validity of assigningseveral isolates a common name and of grouping the known isolates joto tour complexes. The detection of such complexes is in broad agreement with previous serological studies. A previously undescribed isolate (San Miguel IV) obtained from the lepidopteran pest Anticarsia gemmatalis (Lep.: Noctuidae) has been initially characterized following the procedures recommended by Williams and Cory. DNA hy- bridization and Southern blot analysis identified this isolate as a new member of the Polyiridovirus complex. The San Miguel IV MSP gene was identified and a central fragment of ca. 719 bp was recovered by PCR amplification. The restriction endonuclease profiles (5 enzymes)of this isolate were distinct from others previously described. Key words: lnvertebrate iridescent virus; lridoviridae; Classification; Characterization; Anti. carsia gemmatalis; Lepidoptera * Corresponding author. Fax: +44) 86559962, E-mail: [email protected] 0168-1702/94/$07.00 @ 1994 EIsevier Science B.V. AlI rights reserved SSDIOI68-1702(94)OOO29-C

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Page 1: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

V ¡rusResearchELSEVIER Virus Research 33 (1994) 99-121

Comparative studies of iridoviruses:further support for a new classification

Trevor Williams *

NE~C lnstitute of Virology and Environmental Microbiology, Mansfield Road, Oxford, OXI 3SR UK

(Received 10 January 1994; revised 15 March 1994; accepted 16 March 1994)

Abstract

Changes in the classification of invertebrate iridoviruses (IVs) (Iridoviridae) have re-cently been proposed (Williams and Cory, 1994). The previous system of naming isolatesaccording to the host and sequence of discovery (IV type 1, IV2, IV3, etc.) is not adequatefor the purposes of taxonomy, since iridovirus isolates may infect many species, includinghosts from diverse invehebrate orders. The new system of invertebrate iridovirus nomencla-ture, as with several other virus families, is based on geographical origino Proposals havebeen made, based on DNA hybridization and other characteristics, by which invertebrateiridovirus isolates can be assigned to one of tour recognized complexes, or considered ascandidates for alternative assignations. This study reports comparative data on the DNA of14 invertebrate iridovirus isolates used in the Williams and Cory study plus the two typevertebrate iridoviruses, frog virus 3 and fIounder lymphocystis disease virus. DNA studiessupport the validity of assigning several isolates a common name and of grouping the knownisolates joto tour complexes. The detection of such complexes is in broad agreement withprevious serological studies. A previously undescribed isolate (San Miguel IV) obtainedfrom the lepidopteran pest Anticarsia gemmatalis (Lep.: Noctuidae) has been initiallycharacterized following the procedures recommended by Williams and Cory. DNA hy-bridization and Southern blot analysis identified this isolate as a new member of thePolyiridovirus complex. The San Miguel IV MSP gene was identified and a central fragmentof ca. 719 bp was recovered by PCR amplification. The restriction endonuclease profiles(5 enzymes) of this isolate were distinct from others previously described.

Key words: lnvertebrate iridescent virus; lridoviridae; Classification; Characterization; Anti.carsia gemmatalis; Lepidoptera

* Corresponding author. Fax:+44) 86559962, E-mail: [email protected]

0168-1702/94/$07.00 @ 1994 EIsevier Science B.V. AlI rights reservedSSDIOI68-1702(94)OOO29-C

Page 2: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

T. Williams /Virus Research 33 (1994) 99-121100

1. Introduction

Until recently, the inter-relationships among invertebrate iridescent viruses(IVs) were obscure. The paucity of comparative data amongst an increasingnumber of IV isolates was partir due to a decline of interest in IVs as candidateinsect biocontrol agents in the 1960s/1970s. This was followed by a dramaticincrease in the molecular techniques for characterization that are now routine.Most reports of invertebrate IVs have comprised a record of the host species, adescription of icosahedral particles of some 130 nm diameter, a mention of thespectacular opalescent hues which result from the superabundance of virus parti-cles in infected tissues, and often an estímate of the incidence of infection in thelocal host population; which is usually extremely low. A growing number of theserecords prompted Tinsley and Kelly (1971) to propose a numerical system ofnomenclature in which isolates were sequentially allocated numbers and hostspecies descriptions, e.g., Tipula paludosa iridescent virus type 1. However, thissystem is not useful for the purposes of taxonomy since serologically identicalstrains of virus have been isolated from different hosts and allocated differentnumbers.

Recently, the classification and nomenclature of iridescent viruses has beenrevised to account for genetic and serological relationships among invertebrate IVs(Williams and Cory, 1994). The invertebrate isolates were allocated to four distincthybridization groups (Fig. 1). Three of these complexes líe within the lridovirusgenus. The largest group, the Polyiridovirus complex, contains Plowden IV (origi-nally isolated from Tipula paludosa, previously IV 1), and 8 related isolates fromdiverse host species. The other complexes; Oligoiridovirus and Crustaceoiridovirus,have fewer members. The genus Chloriridovirus contains one member, VeTO BeachIV, from the mosquito Aedes taeniorhynchus. This system of classification is inbroad agreement with the serological studies (summarized by Kelly et al., 1979), inwhich a large group of 11 inter-related isolates was described, and an additional 3isolates were described as having intermediate (Fort Collins IV [IV29]) or low(Dazaifu IV [IV6], and Srinagar IV [IV24]) serological relatedness to the main

group.A comparatively large number of isolates, especially from mosquitoes, remain to

be characterized (Table 1). Prior to the study of Williams and Cory (1994), only 11out of the 68 IV isolates reported had genomic data available (restriction fragmentprofiles, etc.), while a further 7 isolates had some degree of serological characteri-zation. In general, the iridescent viruses have had only curiosity value, and with thepassage of time, many isolates have been lost. However, recent studies. haveindicated that IV-host relationships mar be far more interesting than previouslysupposed (Williams, 1993; Williams et al., 1994).

All iridovirus genomes investigated to date display circular permutation andterminal redundancy, which implies that viTal DNA is cleaved after packaging intothe virion; in much the same way as the 'headful' mechanism seen in bacterio-phages (Goorha, 1982). Reflecting this, the Dazaifu IV genome has at least sixorigins of replication identified to date (Handermann et al., 1992). The vertebrate

Page 3: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

T. Williams / Virus Research 33 (1994) 99-121 101

I Geno.: Chloriridiovirus IOeDUS: [ridovir..

OligoiridovirusComplex

Type: Dazaifu IV

CrustaceoiridovirusComplex

Type: Riverside N Type: Vero Beach IV

Riverside(IV3I. IV32)

Vero Beacb(IV3)

Aberystwyth(IV22, IV25)

Forl Collins(IV29)

Nelson(IV9, IVIO, lV18)

Plowden(IVI)

Srinagar(IV24)

Stoneville(IV30)

Tia(IV2)

Timaru(IV16,IV19)

Uitenbage(IV23)

Fig. 1. New classification of invertebrate iridoviruses as proposed by Williams and Cory (1994). Isolatesare named according to geographical origin, and assigned to one of tour hybridization complexes.

iridoviruses, Frog Virus 3 (FV3) and Flounder Lymphocystis Disease Virus(FLCDV), have genomes that are highly methylated at cytosine residues andwhich, at least in FV3, appear to depend on the presence of a viTal encoded ..'

trans-acting protein to assist in transcription by host RNA polymerase (Willis etal., 1990). Fortunately, the common occurrence of a major structural proteinamong all the members of the Iridoviridae has provided a useful genetic markerand conserved feature for comparative studies (Schnitzler and Darai, 1993).

This study is complementary to, and in support oí, the study of Williams andCory (1994), in which the new system of invertebrate iridovirus classification wasproposed. Comparative data are presented on 14 invertebrate iridescent virusesfrom major insect and crustacean orders. The two type vertebrate viruses: FLCDVand FV3 were algo included. Genomic characterization and Southern blot analysisusing an iridovirus-specific gene probe was used to demonstrate the validity of thenew classification system. In addition, a previously undescribed isolate fromAnticarsia gemmatalis (herein named San Miguel IV) has been initially character-ized following the recommendations given in the new classification. AlI nomencla-ture uses the new classification, but virus isolate numbers (IV1, IV2 etc.) areincluded where this improves clarity.

Page 4: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

T. Williams / Virus Research 33 (1994) 99-121102

Table 1Invertebrate iridovirus isolates for which genetic or detailed serological characterization data are not

available

ReferenceHost species

Weiser, 1965Weiser, 1965Tinsley et al., 1971Popelkova, 1982Torybaev, 1970Hassan et al., 1970Vago et al., 1969Chapman et al., 1966Chapman et al., 1966Weiser and Zizka, 1985Becnel and Fukuda, 1989Chapman et al., 1969Anderson,1970Chapman et al., 1966Rieb et al., 1982Stoltz et al., 1968Chapman et al., 1971Buchatsky, 1977Fedorova, 1986Chapman et al., 1968Rieb et al., 1982Rieb et al., 1982Rieb et al., 1982Buchatsky, 1977Fedorova, 1986Avery and Bauer, 1983Chapman, 1974Chapman et al., 1966Chapman et al., 1969Chapman et al., 1969Takoaka, 1980Takoaka, 1980Batson, 1986Weiser, 1968Takoaka. 1980

Federici, 1984Poprawski and Yule, 1990Robertson (unpublished)Federici (unpublished)Steiger et al., 1969Fowler, 1989

Federici and Hazard, 1975Poinar et al., 1985Poinar et al., 1985Grosholz, 1992

Insecta: DipteraAedes annulipesAedes cantansAedes cantansAedes cantansAedes caspius caspiusAedes detritusAedes detritusAedes dorsalisAedes fluvus pallensAedes punctorAedes solicitansAedes sticticusAedes stimulansAedes vexansBezzia pygmaeaChironomus plumosusCorethrella brakeleyiCulex territansCulex territansCulicoides sp.Culicoides clastrieriCulicoides cubitalisCulicoides odibilisCuliseta annulataDixid sp.Prosimulium sp.Psorophora columbiae (confinnis)Psorophora feroxPsorophora horridaPsorophora mathesoni (varipes)Simulium callidumSimulium earleiSimulium neomatipesSimulium omatumSimulium rubicundulumOther insect ordersAcrolophus sp. (Lepidoptera)Phyllophaga anxia (Coloeptera)Pterostichus madidus (Coleoptera)Ephemoptera sp. (Trichoptera)Formica lugubris (Hymenoptera)Scapteriscus borellii (Orthoptera)Crustacean ordersSimocephalus expinosus (Cladocerca)Armadillidium vulgare (Isopoda)Porcelüo scaber (Isopoda)Pórcellio laevis (Isopoda)

Page 5: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

T. Williams /Virus Research 33 (1994) 99-121 103

Table 1 (continued)

Reference

Montanie et al., 1993Lightner and Redman, 1993

Poinar et al., 1980Runnger et al., 1971

2. Materials and methods

AlI the procedures follow those given in Williams and Cory (1994). Iridovirusisolates were obtained from sources worldwide (Table 2) and were selected to berepresentative of a broad range of insect hosts and to include each of therecognized IV genera: lridovirus, Chloriridovirus, Ranavirus and Lymphocystivirus.The majority of invertebrate iridoviruses were amplified in Galleria mellonellawherever possible, and purified by centrifugation to semi-pure suspensions prior toDNA extraction. Standard phenol-chloroform and dialysis protocols were used toextract DNA from virus particles following treatment with Proteinase K and SDS.DNAs were stored at - 20°C until use.

2.1. REN characterization

The fidelity of all material amplified in G. mellonella was checked by compari-son of original and 'amplified material restriction profiles following digestion withHindlIl and electrophoresis in 0.6% agarose in TBE buffer containing ethidiumbromide. Likewise, isolates were characterized by treatment with EcoRI or SalIfollowed by electrophoresis as above. An iridovirus isolate from Anticarsia gem-matalis (Sieburth and Carner, 1987; now named San Miguel IV) which had notbeen included in the study of Williams and Cory (1994) was characterized bytreatment with HindlIl, EcoRI, BamHI, Asp718 and PstI. Sizes of restrictionfragments were estimated using the program MolMatch (Glasgow University),which algo generated coefficients of similarity for pairwise comparisons of restric-tion profiles.

2.2. Southem blof analysis

After photography, gels were denatured, neutralized and blotted overnight ontoa Hybond membrane (Amersham Ltd). Blots were baked at 80°C for 2 h followedby prehybridization at 37°C in 50% formamide, 50% hybridization buffer (50 mMHEPES, 0.02% Picoll 400, 0.02% BSA, 0.02% PVP, 0.1% SDS) for 4 h. A SalIfragment containing 91 % of the Aberystwyth IV (IV22) major structural protein(MSP) gene (Cameron 1990) was radiolabelled by nick translation to high specificactivity and used to probe the blot overnight at the conditions described above.Blots were washed in 2 x SSC at room temperature and twice at 60°C (each for 1h) before autoradiography. Blots were then stripped using 0.4 M NaOH at 45°C for30 min, washed twice in 200 mM Tris-HCI (pH 7.0), 0.1 x SSC. 0.1% SDS. and

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105T. Williams / Virus Research 33 (1994) 99-121

prehybridized and hybridized as before but at a lower stringency: 20% formamide,37°C, followed by washes at 40°C.

2.3. Additional characterization o/ the San Miguel IV

Dot blot hybridization against DNA from each of the three iridovirus hybridiza-tion groups: Plowden and Aberystwyth IV (Polyiridovirus complex) Dazaifu IV(Oligoiridovirus complex) and Riverside IV (Crustaceoiridovirus complex) was

(a)1

kbp

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-- -0.8Fig. 2. (a) REN profiles in 0.6% agarose for iridescent virus DNA following digestion by EcoRI (sizesin khn). Lanes are number accordin2 to the ori2inal tvDe numbers 2iven in Table 2.

Page 9: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

106 7: Williams /Virus Research 33 (1994) 99-121

perfonned. Dots of 100 ng DNA, replicated 5 times, were probed with San MiguelIV DNA radiolabelled with 32p by nick translation. The hybridization conditionswere: 37°C in 40% fonnamide, 60% hybridization buffer (above) followed bycritical washes in 2 X SSC at 55°C. Salmon spenn DNA was used as a control fornon-specific binding. Dots were counted for 3 min in a scintillation counter andthe results used to calculate hybridization relative to homologous DNA aftercorrection for background.

The ability of PCR primer sequences targeted at the MSP gene, to recognizeand successfully amplify the MSP gene region of the isolate from San Miguel IVwas also tested under cycling conditions of high stringency. The forward primerwas designed to hybridize at base numbers 733- 753 (5' GGCGGCC-CAACAGCAACAGC) and the reverse primer (5' GGCACAACCCATTCTAC-

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Fig. 2 (b) Southern blot of EcoRI gel probed at high stringency (50% formamide, 3rC) withAberystwyth IV (previously IV22) MSP gene fragmento Weak bands are highlighted by arrowheads forclarity.

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T. Williams /Virus Research 33 (1994) 99-121 107

GACG) to the complement of bases 1452-1431 of the Aberystwyth IV MSP genesequence 1990). The amplification program involved 40 cycles all

- . The PCR productsite exists two-thirds alongwas

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Page 11: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

T Williams / Virus Research 33 (1994) 99-12110R

(a)

1

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Fig. 3. (a) REN profiles in 0.6% agarose for iridescent virus DNA following digestion by SalI (sizes inkbp). Lanes are number according to the original type numbers given in Table 2.

or from the EcoRI gel in the case of Vera Beach (previously IV3) and FV3. Thesimilarities among the Nelson IV isolates (IV9, IVI0 and IVI8) and between theNtondwe IV isolates (IV21 and IV28) were apparent in both EcoRI (Fig. 2a) andSal 1 (Fig. 3a) gels. In general, isolates displayed the greatest diversity in thenumber of SalI restriction sites; which were numerous in Vera Beach (IV3) orPlowden IV (IV!), but appeared completely absent in Fort Collins (IV29) andFLCDV for example. Genome sizes were consistent with published values, withthe exception of Vera Beach IV (IV3) estimated as 160 kbp using SaII, but whichwas nreviouslv renorted to have an excentionallv larlle genome of 383kbo (Wagner

-2.8

-2.3-2.0-1.7

Page 12: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

109T. Williams /Virus Research 33 (1994) 99-121

(b) 18 22 28 30 ~2 3 6 9 10 21 24 29 31 LJ.. ¡:¡:1

kbp-23.1-11.5-9.4

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Fig. 3 (b) Southern blot of SalI gel probed at high stringency (50% forrnamide, 37°C) with AberystwythIV (previously IV22) MSP gene fragmento Weak bands are highlighted by arrowheads for clarity.

and Páschke, 1977). The coefficients of similarity between isolates from the EcoRIdigest were: IV9: IVI0 88.5%, IV9: IV18 82.1%, IVI0: IV18 91.5%, IVI0: IV2869.1%, IVI0:IV31 67.8%, IV21 :.IV28 92%, IV22:IV28 68.9%, and from the SalIdigest were: IV9: IVI0 76.5%, IV9: IV18 77.8%. These coefficients of similarity(Dice coefficients) reinforced the apparent similarities among the Nelson IV andNtondwe IV isolates, but also suggested relationships between more distantisolates such as Nelson and Riverside IVs (IVI0 and IV31), for example, in theEco RI digests. This highlights the importance of using Dice coefficients derivedfrom a range of restriction enzymes (Grothues and Tümmler, 1991). The meangenome size of the San Miguel IV isolate, calculated from restriction fragmentsizes, was 176.3 kbp (Fig. 4a, Table 2). Dice coefficients derived from REN profilesfrom this study and those published by Williams and Cory (1994) indicated noapparent similarity between the San Miguel IV isolate and any other. San MiguelIV: Tia IV (IV2) values were 67.4% for HindlIl and < 66% for all other profilecomnarisons.

Page 13: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

110 T Williami Virus Research 33 (1994) 99-

Dlb) H E B A

kbp(a) HEBAP

kbDkbo

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0.8. .0.8Fig. 4. (a) REN profiles in 0.6% agarose for San Miguel IV DNA following digestion by HindIIl(H),EcoRI(E), BamHI(B), Asp718(A) or PstI(P) (sizes in kbp). (b) Southern blot of this gel probed at highstringency (50% formamide, 37°C) with Aberystwyth IV (previously IV22) MSP gene fragmento Weakbands are highlighted by arrowheads for clarity.

3.2. Southern blof analvsis

The Aberystwyth IV MSP gene probe showed consistent hybridization amongblots (Figs. 2b and 3b). The Nelson IV isolates (IV9, IVI0, IV18) had virtuallyidentical fragments hybridizing to ibis probe at high stringency; as did the NtondweIV isolates (IV21 and IV28) at low stringency. Dazaifu IV (IV6) showed similarbehaviour to the Ntondwe IV isolates in the location and strength of the hybridiza-tion response to ibis gene probe. Similarities between Fort Collins IV (IV29) andStoneville IV (IV30) were algo apparent in the size of the REN fragments withaffinity to the MSP gene. Vera Beach IV (IV3) showed very weak hybridization to

2.8-

2.3-2.0-1.7-

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T. Williams /Virus Research 33 (1994) 99-121 111

a 5.6kb SalI fragment (highlighted in Fig. 3b), but did not produce an observableresponse in the EcoRI blot at either stringency. The San Miguel IV isolate showeda clear affinity for the probe at high stringency, across all REN digests (Fig. 4b).Neither of the vertebrate isolates, FV3 and FLCDV, showed any affinity for theprobe. The SalI blot did not produce consistent results when probed at lowstringency and so is not included here.

3.3. Additional characterization o/ the San Miguel IV isolate

The San Miguel IV isolate hybridized solely to members of the Polyiridoviruscomplex. Relative dot-blot hybridization values recorded were: 16% for PlowdenIV (IVI), 12% for Aberystwyth IV, and < 0.2% for Dazaifu IV (IV6), andRiverside IV (IV3I) at the intermediate stringency used, after correction forbackground hybridization.

This isolate was recognized by the oligonucleotide primers derived from theAberystwyth IV MSP gene sequence (Cameron 1990), and a product virtuallyidentical in size to the Aberystwyth IV product (i.e., 719bp) was detected. How-ever, unlike the Aberystwyth and Plowden isolates, the amplicon was not cleavedby XhoI.

4. Discussion

The data preseI)ted here have illustrated the relationships among a broad rangeof IV isolates spanning all the genera of the Iridoviridae currently recognizecl. Theobserved affinities for the MSP gene probe in the Southern blots analysis sup-ported the findings of Williams and Cory (1994), who detected distinct hybridiza-tion groups within the lridovirus genus. The grouping of the Nelson IV isolates(IV9, IVI0 and IVI8) under a cornmon name was supported by the REN analysis,Dice coefficients and Southern blot results of this study; likewise for the NtondweIV isolates (IV21 and IV28). The remaining isolates were distinct from oneanother. Southern blot analysis was consistent with the observation of discretehybridization complexes, inasmuch as isolates showed a high (Polyiridovirus com-plex), low (Oligoiridovirus complex), or no apparent affinity (Crustaceoiridoviruscomplex) to the Aberystwyth IV MSP gene probe.

The results of this study were generally consistent with previous serologicalstudies (e.g., Glitz et al., 1968; Fowler and Robertson 1972; Kalmakoff et al., 1972;Elliott et al., 1977; Carey et al., 1978; Kelly et al., 1979; Cole and Morris, 1980)The only differences to the serological studies relate to Dazaifu IV (IV6) andSrinagar IV (1V24), both of which were previously described as unrelated to otherisolates (Bailey et al., 1976; Kelly et al., 1979). However, the Ntondwe IV isolates(1V21 and 1V28) appeared related to Dazaifu IV (1V6), whereas Srinagar IV(1V24) showed clear affinities to the large Polyiridovirus complex (see also Williamsand Cory, 1994).

The vertebrate iridoviruses, FV3 and FLCDV showed no DNA similarities toany of the invertebrate IVs. These vertebrate isolates were consistently negative in

Page 15: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

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Page 21: Comparative studies of iridoviruses: further support for a new classification · 2008. 12. 2. · This system of classification is in broad agreement with the serological studies

118 T Williams /Virus Research 33 (1994) 99-121

all the tests performed, even the low stringency Eco RI Southern blot. Theytherefore maintain their. previous status as distinct and separate genera within theIridoviridae.

As shown by ibis and previous studies, iridoviruses naturally infect across hosttaxa, e.g., Lepidoptera and Coleoptera by Nelson IV, Lepidoptera and Hemipteraby Ntondwe IV, Crustacea and Nematoda by Riverside IV (Poinar et al., 1980).This has highlighted the inherent deficiencies of basing the nomenclature of thevirus upon the host which can lead to much confusion, as is currently seen in theBaculoviridae. The use of geographical descriptors has precedence in a number ofother virus families and, if adopted by other workers in iridoviruses, shouldprevent the problems of virus nomenclature seen elsewhere.

Recently, Stohwasser et al. (1993) used PCR techniques directed at highlyconserved afeas within the Aberystwyth IV and Plowden IV MSP genes to locateand characterize the homologous Dazaifu IV (IV6) gene. They identified twoEcoRI fragments: X (2.85 kbp) and Q (5.9 kbp) as hybridizing to an RNAtranscript of the gene. In the present study, only the X fragment hybridizedstrongly to the gene probe (at low stringency) (Table 3); presumably becauseapproximately half of the 251 upstream bases in the Q fragment are not present onthe Aberystwyth IV SalI fragment which constituted the probe.

The MSP gene codes for a protein of ca. 50K, ubiquitous among the Iridoviri-dae. This gene has considerable value as a marker by which to orientate thecircularly permutated genome characteristic of iridoviruses, and as a common genefor comparative investigatiops. The overalllevels of DNA sequence identity to theAberystwyth IV MSP gene are very similar for FLCDV and Dazaifu IV at 69.3%and 73.4% respectively. However, Dazaifu IV (IV6) hybridized to the gene probe,whereas FLCDV did noto This may be due to the length of the continuous basehomology which is located more closely together for Dazaifu but dispersed ayerthe entire gene in FLCDV. In addition, Schnitzler and Darai (1993) recentlycompared the deduced MSP amino acid sequences of Dazaifu IV, Aberystwyth IV,and Plowden IV with that of FLCDV. They reported overall amino acididentity/similarity values of 53%/29.5% for Dazaifu IV, 50.3%/33.8% for Plow-den IV and 49.1%/34.2% for Aberystwyth IV when compared to the homologousFLCDV sequence. A diversity of other genes are now being identified fromDazaifu IV, including a putative helicase gene (Sonntag et al., 1994a, 1994b), zincfinger proteins, a non-histone chromosomal protein, and a polypeptide similar toGTP phosphohydrolase which is a known bacterial antimutator (Schnitzler et al.,1994).

The previously uncharacterized iridovirus isolate (San Miguel IV) from the Soyapest Anticarsia gemmatalis (Lep. Noctuidae) was found to be a new member of thePolyiridovirus complex by hybridization. This isolate, was distinct from previouslydescribed isolates in terms of restriction profiles and location of the MSP genefragments. Originally from Tucumán province, Argentina (C.B. Moore pers.comm.), the isolate has been given the name San Miguel IV, ibis being the majartown of the province, following the naming procedures of the new classification(Williams and Corvo 1994). It is one of a handful of IV isolates which have been

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found to induce epizootics of patent (Iethal) infection in the host population. Thisbrings to a total of ten, the number of isolates confirmed as belonging within thePolyiridovirus complex.

A great number of iridovirus isolates have not be en characterized (Table 1) butiridovirus isolates for which genetic information is available are from: Simuliumvittatum (Diptera) (Erlandson and Mason, 1990), and Scapteriscus aclectus (Ortho-ptera) (Boucias et al., 1987). An isolate from Nereis diversicolor (Annelida)(Devauchelle, 1977) has been subject to detailed physical characterization. Theseisolates have yet to be assigned to complexes. This study further demonstrated thevalidity of the new system of classification for invertebrate iridoviruses, andshowed how a novel isolate can be readily characterized and assigned to aniridovirus complex within the new system.

Acknowledgements

1 am deeply grateful to the people who donated the material which made thisstudy possible: Mark Allen, Anne-Marie Aubertin, Susan Avery, Martin Ayres,Brenda Ball, Peter Christian, Gholamreza Darai, BrianFederici, Rakesh Goorha,Barry Hill, Gary Kinard, Nigel McMillan, and Clyde Moore. 1 thank Chris Hattonfor photography and Tim Carty for the Galleria supply. Jenny Cory and DavidBishop provided helpful comments on the manuscript.

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