crossref annual meeting 2012 global panel choon shil lee
TRANSCRIPT
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CrossRef in Korea
Choon Shil LeeSookmyung Women’s University
Committee for Information Management, KAMJE
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CrossRef in Korea
What we do atKAMJE
Korean Association of Medical Journal Editors
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• KAMJE Overview• KAMJE Databases• Synapse: KAMJE’s CrossRef Services• Statistics• Benefits• Challenges
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KAMJE Overview
http://kam-je.or.kr
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KAMJEKorean Association of Medical Journal Editors
• Since 1996• Editor’s association• To promote professionalism in medical
editing and to improve editorial standards• Mostly medical society journals
biomedical and health-related• A non-profit, volunteers’ association • Similar to
WAME (World Association of Medical Editors)CSE (Council of Science Editors)
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• Share knowledge and experiences–Workshops, Editor academy,
Guidelines–on Research Ethics, Publication
ethics, Uniform requirements, etc
• Journal peer-reviewsPeriodic Journal Evaluation processes
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• DatabasesKoreaMed http://koreamed.org
Synapse http://synapse.koreamed.org
KoMCI http://komci.org
Korean Medical Journal Information http://journals. koreamed.org
Central: Individual journal website service
XMLink: A subsidiary for database development, production, operation and maintenance services
215 KAMJE Journals
Workshops
Editor Academy
KAMJE publica-tions
Journal Peer-Review Meet-ings
KAMJE Databases
Central: Individual journal website ser-vice
XMLink, a subsidary of KAMJE for database development and production
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KAMJE Databases
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Kore-aMed• Since 1997• Abstracts• PubMed equivalent• PubMed XML compatible• 190 journals• Over 190,000 records• 11,000 records added
every year• LinkOut to Synapse &
Journal web sites (168js.)• DOI linking• Cited-by linking:
Synapse/CrorssRef, KoMCI
Synapse• Since 2007• Full texts• PMC equivalent• PMC XML• 121 journals• Over 38,000 records• Linking to KoreaMed &
Journal web sites• DOI linking platform• Cited-by linking:
Synapse/CrossRef, KoMCI
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KoMCI
• Since 2000• Abstracts & Cited Ref-
erences• Web of Science & JCR
equivalents• 190 journals• 10,000 recs & 200,000
refs added every year• LinkOut to Synapse &
Journal web site• DOI linking• Cited-by linking:
KoMCI
Korean Medical Journal Info.
• Since 2008• Journal bibliographic in-
formation• NLM’s Journals database
equivalent• Over 700 journals• Over 3,000 records: title
change history• Linking to KoreaMed,
Synapse & Journal web site
• CrossRef/DOI linking• Journal Holding Info• Database coverage
215 KAMJE Journals
190 KoreaMed Journals
122 Synapse Journals
55 Central Journals
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Databases provided by KAMJE
• Cover KAMJE member journalsMedicine, Dentistry, Nursing, Nutrition, Veterinary medicine, and some bioscience
• All Information in English• Free Access/Open Access journals
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Database Languages
• Interface language in English• Articles in Korean or in English• Require basic bibliographic info in English– Front matters:
Title, Author, Affiliation, Correspondence
– Abstract– Figures, Tables– References
• Provide full text PDFs in Korean or in English
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KAMJE databases are
• Internally integrated– 3 different (KoreaMed, Synapse & KoMCI ) services
originating from a database– Journal DB for set-up & check-up journal info.
• Created by Synapse XML files– PMC Journal Article Tag Sets & DTD
(NLM DTD 2.3 JATS 1.0)– One source file used for multiple databases
• Use as is• Extract/convert• Submit/deposit to various external databases
Synapse & its byproduct/derivative databasesOne source file, 7 (+2) different databases
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Synapse: KAMJE’s CrossRef Services
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e-journal platform of core biomedical and life science journals currently
published in Korea
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Synapse
• A digital archive and reference linking platform of Korean medical journals
• Created for DOI landings• KAMJE is a sponsoring publisher for
member journals– 113 societies publishing 121 journals (as of
Nov. 2012)
Synapse: full text record for an English-language article
Synapse: full text record for an Korean-language article
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Reference Linking
Reference linking
Reference linking of Central journals
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Cited-by Linking
Cited-by linking
“Cited-by Synapse/CrossRef” Search
Cited-by linking for Central jour-nals
“Cited-by Synapse/CrossRef” link-ing also available in KoreaMed
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DOIs used in various KAMJE data-bases for diverse linking purposes
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Linkings! Linkings! Global Links!
Web of Science (SCI) full text link to the KJR ar-ticle
Reference Linking from/to articles citing and cited
Reference Linking from/to articles citing and cited
Web of Science (SCI) full text link to the KJR ar-ticle
Reference Linking from/to articles citing and cited
Reference Linking from/to articles citing and cited
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Web of Science Synapse/CrossRef
2009 2012 2009 2012
72 89 ? 53
Korean J Radiol. 2001 Jul-Sep;2(3):151-158.http://dx.doi.org/10.3348/kjr.2001.2.3.151
Times cited by
• Even if a Korean journal is not covered by SCI or SCOPUS, citation statistics (especially from foreign journals) can be obtained if the journal participate in Synapse.
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CrossCheck
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CrossMark
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CrossMark
• Plans to implement in the near future
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Statistics
215 KAMJE Journals
190 KoreaMed Journals
122 Synapse Journals
67 PMC Journals
55 Central Journals
51 CrossCheck Journals
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Total Medicine
Den-tistry
Veteri-nary Sci-
ence
Nursing Nutri-tions
Bio-science
KAMJE 215 181 13 3 12 4 2
KoreaMed 190 162 10 3 10 4 1
Synapse 123 105 7 2 4 3 1
CrossRef 123 105 7 2 4 3 1
PMC 67 59 4 2 0 1 1
Journals
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Open Access Free Access
121 Synapse journals ( As of November 2012)
Free Access vs. Open Access journals
7878
2007 2008 2009 2010 2011 2012* Total
Synapse
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2,318
10,883 7,701
8,487 8,647
38,070 Synapse jour-
nals** 18 24 28 17 20 16 123
PMC
25 399
1,524 3,105
3,891 4,051
12,995
PMC journals 3 15 20 12 17 67
non-Synapse
12,596
4,968
4,070 4,174
3,898 1,690
31,396
Total
12,630
7,286
14,953
11,875
12,385 10,337
69,466
*As of Nov 08, 2012**No. of DOI prefixes newly assigned
Articles processed: 2007-2012
7979
Articles published: 2007-2012, by language
2007 2008 2009 2010 2011 2012* Total
Kore-aMed English 2,486
3,309 4,266
4,336
5,559
4,902
34,541
Korean 6,848
6,012 5,783 6,075
5,255
3,179
156,916
Total 9,334
9,321
10,049
10,411
10,814
8,081
191,457
Synapse English 2,336
3,109 4,216
3,907
4,792
4,474
25,880
Korean 829
903 1,265
2,604
2,384
1,934
12,415
Total 3,165
4,012 5,481
6,511
7,176
6,408
38,295
PMC English 957
1,248
1,883 3,129 3,893 4,051 15,161 *As of Nov 08, 2012
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Synapse journals and articles
• Synapse journals and articles drastically increased over the last 5 years.
• Synapse journals (articles) increased from 57 to 121 during the last 3 years.
• English language journals (articles) increased from 27 to 71 during the last 3 years.
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Synapse journals and articles
• 10,800 articles were published in 2011 by KoreaMed journals.11,000 articles are expected in 2012.
• Synapse articles are increasing:– 66.4%of KoreaMed articles in 2011– 79.3%of KoreaMed articles in 2012
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Synapse journals and articles
• So far, More than 38,000 articles are available in Synapse.
• Annual input of 8,000 articles is expected from more than 120 journals
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DOI prefixes: 2007.11-2012.10
Year Prefixes Cumulative prefixes
Journals CumulativeJournals*
2007 15 15 18 182008 20 35 24 422009 27 62 28 702010 15 79 17 872011 20 99 20 1072012 14 113 16 123
*1 journal ceased publication. 2 journals in prepa-ration.
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DOI deposits: 2007.11-2012.10
Year Deposits Monthly average
Cumulative total
2007 34 17.0 34
2008 2,318 193.2 2,352
2009 10,883 906.9 13,235
2010 8,286 690.5 21,521
2011 7,674 639.5 29,195
2012 8,647 864.7 37,842
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KAMJE’s DOI history
• What is it? (2005)came across “DOI” in literature
• Many discussions, workshops with KAMJE member journal editors
• Visited JST (2007.5)• 1st DOI prefixes assigned (2007.6.28)• DOI submission test, 1 article (2007.11.28)• 1st DOI submissions, 25 articles
(2007.11.29)
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1st DOI prefixes assigned by CrossRef (2007.6.28)
DOI submission test, 1 article (2007.11.28)
1st DOI submissions, 25 articles (2007.11.29)
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Benefits
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• Linking to the world• Increased “International visibility”,
“Discoverability”and “Retrievability”• Many journals are picked up by major
abstract databases
Benefits
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Benefits
• Quality, reliability, and trustworthiness in the discovery of Korean medical research information
• Strong bonds among KAMJE journals• Many new journals to join KAMJE
KAMJE Journals Directory 2012 ( published in January 2012)
KAMJE Journals Directory 2012 ( published in January 2012)
KAMJE Journals Directory 2012 ( published in January 2012)
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Challenges
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Challenges
• DOI Resolution errors – DOI conflicts/Wrong DOIs/Workflow control
• Full text XML to CrossRef DOI deposit XML -XML converters
• DOI deposit submission queues– At the end/beginning of a month, 1-3 days
sitting in the queue– The problem seems gone after the DOI
submission system transition in October 2012
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Year DOI resolutions % share
Handle Failures
error rate (%)
DOI Prefix
CrossRef KAMJE Total Handle Failures
2009
342,381,351
33,370 0.01
1,596 4.78 17 12
2010
464,248,336
168,578 0.04
3,202 1.90 48 25
2011
575,582,608
470,536 0.08
4,815 1.02 96 57
2012
601,836,099
1,362,107 0.23 6,558 0.48 116 74
DOI resolutions and error rates
• DOI resolutions % share increased• Error rates decreased
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Challenges
• Persuading societies to use DOI• Communicate with societies what to
do and what to not do• Back issues–Most societies will begin putting DOIs for
current and on-going articles– Sometimes for the last 1 or 2 years– But not for the last 5 or 10 years– Only a few journals from the 1st issue
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DOIs for back issues
• Limited budgets• No Born digital files
can not easily OCR• Keying in “References” all over again?• Will be very nice if “Cited-by linking” is
available to back issues• Would it be o.k. to apply “cited-by
linking” to articles with no “reference linking”?
2012-11-15 100100100
Journal 1st
issueSynapse coverage
begins
Synapse coverage (yrs)
Allergy Asthma Immunol Res
2009 2009 4
Asian Spine J 2007 2007 6
Clin Exp Otorhinolaryngol 2008 2008 5
Clin Orthop Surg 2009 2009 4
Gut Liver 2007 2007 6
J Adv Prosthodont 2009 2009 4
J Clin Neurol 2005 2005 8
J Educ Eval Health Prof 2004 2004 9
Korean J Parasitol 1963 1963 50
Korean J Radiol 2000 2000 13
Lab Med Online 2011 2011 2
Nutr Res Pract 2007 2007 6
Saf Health Work 2010 2010 3
Journals with DOIs for all issues
• 13 journals among 121 Synapse jour-nals
• Relatively new journals (began publi-cation in the late 2000s) except 1 jour-nal
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APAMED Central
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• KAMJE’s initiative to assist WHO WPRO and SEARO countries to build e-journal databases.
• DOI implementation is in consideration.
http://apamedcen-tral.org
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Concluding Remarks
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What CrossRef Services are you participating in?
• Reference Linking• CitedBy Linking• CrossCheck• CrossMark• CrossRef Metadata Services
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To what types of content are you assigning CrossRef DOIs? How many of each?
• Journal articles• Data• Figures, Tables• Supplementary materials• Journal titles• Books (3)• Proceedings titles• Proceedings papers Components• Reports, theses
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Concluding Remarks
• KAMJE plays an important role as an Open Access publisher for Korean medical journals to promote and facilitate– Global distribution of Korean medical
research information– International visibility, discoverability
and retrieavability
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Concluding Remarks
• KAMJE’s recent activities (especially database related activities) are very much focused on keeping up with international collaborative efforts by adapting international norms and standards in publishing and database industry.
• DOIs and other CrossRef services have been and are very effective means to achieve these goals.
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References
• KoreaMed http://koreamed.org
• Synapse http://synapse.koreamed.org
• KoMCI http://komci.org
• Korean Medical Journal Information http://journals.koreamed.org
• KAMJE journalshttp://kamje.or.kr/KAMJE-Journals/intro.html
• KAMJE http://kamje.or.kr
• XMLink http://xmlink.kr