cyrus mehta, ph.d. president, cytel inc. · 2017. 10. 8. · • primary outcome is major adverse...

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Introduction to the new East 6 on the Architect Platform Cyrus Mehta, Ph.D. President, Cytel Inc.

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Page 1: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Introduction to the new East 6on the Architect Platform

Cyrus Mehta, Ph.D.President, Cytel Inc.

Page 2: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Agenda

• Introduction to the new East on the Architect platform• Four Examples to Illustrate New Features of East

1. Schizophrenia Trial: illustrates more flexible boundaries; delayed response; incorporating Bayesian priors into design

2. Cardiovascular Outcomes Trial: illustrates non‐inferiority  based on FDA guidance provisional approval based on surrogate and final approval based on clinical endpoint

3. Lung Cancer Trial: illustrates the impact of stratified randomization on study design

4. Calls to R functions within simulations• Q & A

2East WebinarApril 23-24, 2013

Page 3: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

3East WebinarApril 23-24, 2013

1994 2000 2010

Page 4: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Where are we today?

• East on the Architect platform is backed up by 20 years of R&D

• Its algorithms have been thoroughly battle‐tested

• It is the industry standard for designing adequate and well‐controlled clinical trials

4East WebinarApril 23-24, 2013

Page 5: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

• Broad coverage of designs for biostatisticians• One integrated tool for all types of designs: fixed sample, group sequential or adaptive

• Superior User Interface• Multiple windows with graphs and tables • Organized storage of designs in workbooks

• Rapid creation, viewing and filtering of multiple scenarios for design parameters

• Commitment to continuous improvement and expansion of features 

What is special about the new East?

April 23-24, 2013 East Webinar 5

Page 6: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

• Integrates East and SiZ in a common interface• Handles response lags and drop‐outs for normal and binomial endpoints

• Greater flexibility with futility boundaries and display on different scales

• Simulates stratified randomization designs• Permits external calls to R within simulation cycle

• Incorporates uncertainty about  and  through Bayesian priors for power calculations

New Statistical Capabilities

April 23-24, 2013 East Webinar 6

Page 7: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Normal Two-Sample

April 23-24, 2013 East Webinar 7

Page 8: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

• Two arm trial: asenapine vs. olanzapine (control)• Primary endpoint is negative symptoms assessment (NSA) on 24‐point scale observed at week 26

• Design for  = 2 and  = 7.5 with two sided =0.05 and 80% power

• But  could be as small as 1.6 so examine a range of sample size requirements

• Enrollment ramps up to 8 patients/week• Up to 8% drop‐outs anticipated

Example 1: Schizophrenia Trial

April 23-24, 2013 East Webinar 8

Page 9: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Input Window

April 23-24, 2013 East Webinar 9

Page 10: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Inputs with Output Preview

April 23-24, 2013 East Webinar 10

Page 11: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Use of filter to eliminate designs

April 23-24, 2013 East Webinar 11

Page 12: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Convert Single Look Design into GSD

First save the selected design(s) to the library for further editing

Then change number of looks and boundary information 

April 23-24, 2013 East Webinar 12

Page 13: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

View the Boundaries and Compute

With futility boundary, sample size has increased to 625 patients

April 23-24, 2013 East Webinar 13

Page 14: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Bayesian Probability of Success (Assurance)

Assign a prior distribution to  to capture the uncertainty associated with it

The “Assurarce” of success is only 0.685 due to uncertainty about 

In this case the “Assurance is 0.798 dueto less uncertainty about 

April 23-24, 2013 East Webinar 14

Page 15: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Compare Design Summaries

April 23-24, 2013 East Webinar 15

Page 16: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Incorporate Delayed Response and Dropouts

April 23-24, 2013 East Webinar 16

Page 17: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Compare designs with and without lag

• Notice that, due to the 26 week response lag, there is very little saving in expected sample size.

• Maximum study duration is 110 weeks

April 23-24, 2013 East Webinar 17

Page 18: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Reason for lack of sample size saving in GSD when there is a long delay in the primary response

• The is a large gap (> 208 patients) between sample size and completers• By the time 669 cpmpleters for IA 3 the total enrollment is over. Hence

no saving of sample size if trial stops at look 3• But, there is a saving of time; trial stops 20 weeks earlier if stopped at look 3 

April 23-24, 2013 East Webinar 18

Page 19: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Examine Final Design in Detail

Icons for viewing design details, graphs, tables and summaries

April 23-24, 2013 East Webinar 19

Page 20: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

• New agents for type‐2 diabetes must demonstrate safety to cardiovascular risk

• Primary outcome is major adverse cardiac event (MACE) ‐‐ death, MI, stroke

• =0.025 ‐‐ if upper bound of 95% CI for HR is:• < 1.8 – file for provisional approval• < 1.3 – file for final approval

• 2.5% annual event rate in this population• Plan 24 month enrollment; 60 month study

Example 2: CV Outcomes Trial

April 23-24, 2013 East Webinar 20

Page 21: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

• How many patients are needed for a 5‐year study?

• What is the impact of drop‐outs and non‐uniform accrual?

• How soon can we demonstrate non‐inferiority to HR=1.8?

• What is the impact of population heterogeneity on study duration and sample size?

Important Design Questions

April 23-24, 2013 East Webinar 21

Page 22: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Sample size requirements incorporating drop-outs and non-uniform accrual

• 611 events are needed for 1.3 non‐inferiority

• Sample size is 6844 for a 5‐year study

April 23-24, 2013 East Webinar 22

Page 23: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Demonstrating 1.8 non-inferiority

Could file for 1.8 non‐inferiority within 17 months

April 23-24, 2013 East Webinar 23

Page 24: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Comparing E-charts for 1.3NI and 1.8NI

April 23-24, 2013 East Webinar 24

Page 25: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Suppose the annual event rate is 2% instead of 2.5%. What is the impact on 1.8 NI submission?

Impact of Lower Event Rate on 1.8 NI

The interim and final analysis times are each delayed by about 2 

April 23-24, 2013 East Webinar 25

Page 26: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Investigate by simulation

Impact of Lower Event Rate on 1.3NI

April 23-24, 2013 East Webinar 26

Page 27: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

12 month delay in testing 1.3 NI

If event rate is 2.5%/year, the study duration is 60 monthsIf event rate is 2%/year, the study duration is 72 months

April 23-24, 2013 East Webinar 27

Page 28: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

• The base‐case design has:• 2‐sided level 0.05 logrank test• 90% power to detect HR = 0.447• Baseline hazard (control arm) = 0.009211• 3 equally spaced OBF stopping boundaries• Uniform enrollment at 12/weeks for 24 weeks

• Consider stratification by cell type (4), age (2)  and performance status (2)

Example 3: Lung Cancer

April 23-24, 2013 East Webinar 28

Page 29: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Kalbfleisch and Prentice (2002) Data

Cell type Proportion Hazard Ratio

Small cell 0.28 Baseline

Adenocarcinoma 0.13 2.127

Large cell 0.25 0.528

Squamous 0.34 0.413

Age Group Proportion Hazard Ratio

≤ 50 0.28 Baseline

> 50 0.72 0.438

Karnofsky P.S. Proportion Hazard Ratio

≤ 50 0.43 Baseline

50 to 70 0.37 0.164

>70 0.20 0.159

April 23-24, 2013 East Webinar 29

Page 30: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Add the stratification information

April 23-24, 2013 East Webinar 30

Page 31: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Compare Stratified and Unstratified

April 23-24, 2013 East Webinar 31

Page 32: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

• Base Case: single look design; 1‐sided  = 0.025and default values for other parameters

• Simulate design without any modification• Simulate design with responses generated by a Weibull distribution called up from R

• With shape parameter > 1: decreasing hazard• With shape parameter  1: constant hazard• With shape parameter <1: increasing hazard

Example 4: Calls to External R-routines

April 23-24, 2013 East Webinar 32

Page 33: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

R-function for Weibull Distribution

April 23-24, 2013 East Webinar 33

Page 34: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Compare designs with Weibull Responses

April 23-24, 2013 East Webinar 34

Page 35: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

East 6.1•Assurance•Stratified Logrank•R connection

East 6.2•Unblinded SSR•Negative binomial/Poisson

•Interval‐based designs

•Gatekeeping procedures for Multiple endpoints

East 6.3•Two‐stage adaptive dose selection

•Blinded SSR•Predictive interval plots

Roadmap to further development

35East WebinarApril 23-24, 2013

Page 36: Cyrus Mehta, Ph.D. President, Cytel Inc. · 2017. 10. 8. · • Primary outcome is major adverse cardiac event (MACE) ‐‐death, MI, stroke • =0.025 ‐‐if upper bound of 95%

Thank You

Questions?

April 23-24, 2013 East Webinar 36