dhfr - proceedings of the national academy of sciences osmundae saccharomyces cerevisiae serpula...
TRANSCRIPT
DHFR
MICROSPORIDIA
FUNGI (Chytrids)
FUNGI(Ascomycetes)
FUNGI(Basidiomycetes)
FUNGI (Glomeromycetes)
METAZOA
BACTERIA
STREPTOPHYTAGREEN ALGAE
lack 5’-end
0.2
Polaromonas spAcidovorax citrulli
Leptothrix cholodnii
Candidatus Accumulibacter
Bacillus sp
Pasteurella multocida
Fluviicola taffensisEscherichia coli
Micromonas spOstreococcus tauri
Pisum sativum
Arabidopsis thaliana
Ricinus communisPopulus trichocarpa
Nematostella vectensisBranchiostoma floridae
Gallus gallus
Bos taurus
Homo sapiensMus musculus
Glomus intraradicesPneumocystis carinii
Pyrenophora triticiPhaeosphaeria nodorum
Sclerotinia sclerotiorum
Podospora anserina
Glomerella graminicolaGrosmannia clavigera
Gibberella zeae
Nectria haematococcaTrichoderma reesei
Sporisorium reilianumUstilago maydis
Melampsora lariciSchizophyllum commune
Serpula lacrymansLaccaria bicolor
Coprinopsis cinerea
Batrachochytrium dendrobatidisEncephalitozoon cuniculi
Encephalitozoon intestinalisEncephalitozoon romaleae
Encephalitozoon hellem
1/82
0.92/-1/98
1/99
1/73 1/100
0.94/89
1/91
1/100
0.99/-
0.97/73
0.97/-
0.86/-
1/100
1/86
0.99/-0.83/-
0.99/-
0.99/81
1/99
0.82/-1/93
0.93/-
1/100
0.99/770.99/-
1/100
0.87/-
GK
Ilyobacter polytropus
Desulfurispirillum indicum
Desulfurobacterium thermolithotrophum
Thermovibrio ammonificans
Rubrobacter xylanophilus
Arthrospira platensiscyanobacteriumNostoc punctiforme
Lyngbya majusculaCyanothece sp
Natranaerobius thermophilus
Lactobacillus delbrueckiiStreptococcus thermophilus
Haloplasma contractileRuminococcus sp
Serpula lacrymansCoprinopsis cinerea
Laccaria bicolor
Cryptococcus neoformansPuccinia graminis
Malassezia globosaUstilago maydisSporisorium reilianum
Coccidioides posadasii
Meyerozyma guilliermondii
Yarrowia lipolytica
Zygosaccharomyces rouxii
Lachancea thermotoleransCandida glabrata
Saccharomyces cerevisiae
Nematostella vectensisBranchiostoma floridae
Gallus gallusXenopus laevis
Ciona intestinalisDaphnia pulex
Loa loa 312085627
Brugia malayi 170575589
Encephalitozoon cuniculi
Encephalitozoon intestinalis
Encephalitozoon hellem
Encephalitozoon romaleae
MICROSPORIDIA
FUNGI(Ascomycetes)
FUNGI(Basidiomycetes)
METAZOA
BACTERIA
0.2
1/76
0.86/-
0.9/-
1/90
0.99/-
0.94/-
0.84/-0.96/79
0.99/82
1/930.96/79
1/841/95
0.95/72
0.98/-
1/800.81/-
0.9/-
1/100
1/100
1/91
Nosema ceranaeEnterocytozoon bieneusi
NDK
Enterocytozoon bieneusi
Aspergillus terreus
Talaromyces stipitatus
Magnaporthe oryzaeCoccidioides immitis
Nosema ceranae
Penicillium chrysogenumBatrachochytrium dendrobatidis
Neosartorya fischeri
Cryptococcus neoformans
Trichophyton equinum
Ajellomyces dermatitidis
Gibberella zeae
Arabidopsis lyrataBrassica rapa
Paxillus involutus
Malassezia globosa
Coprinopsis cinerea
Danio rerio
Camponotus floridanus
Picea sitchensis
Archaeoglobus profundus
Phaeodactylum tricornutum
Schizophyllum commune
Thalassiosira pseudonana
Macrococcus caseolyticus
Anopheles gambiae
Synechocystis sp
Arthrospira platensis
Rattus norvegicus
Laccaria bicolor
Apis mellifera
Synechococcus sp
Xenopus tropicalisDaphnia pulex
Drosophila mojavensis
Tetraodon nigroviridisCaligus clemensi
Perkinsus marinus
Sorghum bicolor
Physcomitrella patens
Monosiga brevicollis
Ectocarpus siliculosus
Capsaspora owczarzaki
Chelonus inanitus
Phytophthora infestans
Brevibacillus brevis
Geobacillus thermoglucosidasius
Thermosynechococcus elongatus
Oryza sativa
Lepeophtheirus salmonis
Gallus gallus
Trichoplax adhaerens
Selaginella moellendorffii
Ricinus communis
Encephalitozoon intestinalisEncephalitozoon cuniculi
Encephalitozoon romaleaeEncephalitozoon hellem
MICROSPORIDIA
METAZOA
FUNGI(Ascomycetes)
FUNGI(Basidiomycetes)
BACTERIA
STREPTOPHYTA
STRAMENOPILESALVEOLATES
FUNGI (Chytrids)
STRAMENOPILES
0.2
0.98/76
1/71
1/810.99/-
0.87/-0.95/-
1/92
0.91/-0.88/-
1/811/100
1/100
0.91/-0.98/- 1/87
0.9/-1/87
0.92/-0.93/75
1/840.92/-
0.99/-
0.8/-
1/821/96
0.91/760.98/75
0.99/-
0.92/-0.97/-
1/-
0.95/-
1/94
0.93/-1/74
Desulfitobacterium hafniense
Paenibacillus curdlanolyticus
Finegoldia magna
Waddlia chondrophila
Streptobacillus moniliformis
Fusobacterium sp
Providencia rustigianii
Cronobacter sakazakii
Micromonas sp
Chlamydomonas reinhardtii
Arabidopsis thaliana
Ricinus communis
Glycine max
Populus trichocarpa
Puccinia graminis
Cryptococcus neoformans
Schizophyllum commune
Serpula lacrymans
Coprinopsis cinerea
Laccaria bicolor
Yarrowia lipolytica
Penicillium marneffei
Neurospora crassa
Glomerella graminicola
Metarhizium anisopliae
Nectria haematococca
Gibberella zeae
Monosiga brevicollis
Salpingoeca sp
Amphimedon queenslandica
Nematostella vectensis
Apis mellifera
Drosophila persimilis
Bombyx mori
Tribolium castaneum\
Daphnia pulex
Caenorhabditis briggsae
Ascaris suum
Brugia malayi
Salmo salar
Homo sapiens
Mus musculus
Xenopus laevis
PK
MICROSPORIDIA
FUNGI(Ascomycetes)
FUNGI(Basidiomycetes)
METAZOA
BACTERIA
CHOANOFLAGELLATA
STREPTOPHYTAGREEN ALGAE
0.2
1/97
1/1001/78
1/100
1/94
1/100
1/100
1/99
1/-
1/96
1/95
1/84
1/100
1/100
1/-
0.99/-
0.98/-
0.94/-
0.85/-
1/96
0.83/-
1/86
1/1001/81
1/721/98
1/771/98
1/831/95
1/96
1/1001/97
1/841/93 Encephalitozoon romaleae
Encephalitozoon hellem
Encephalitozoon cuniculi
Encephalitozoon intestinalis
Nosema bombycis
TS
Anopheles darlingi
Bradyrhizobiaceae bacterium
Oryza sativa
Kluyveromyces lactis
Agaricus bisporus
Aureococcus anophagefferens
Bacillus smithii
Daphnia pulex
Chlorella variabilis
Oikopleura dioica
Ustilago maydis
Mus musculus
Xenopus laevis
Salpingoeca sp
Litopenaeus vannamei
Pan troglodytes
Branchiostoma floridae
Vitis vinifera
Debaryomyces hansenii
Bradyrhizobium japonicum
Lutiella nitroferrum
Phaeodactylum tricornutum
Exiguobacterium sp
Coprinopsis cinerea
Anaerophaga sp
Selaginella moellendorffii
Ashbya gossypii
Mixia osmundae
Saccharomyces cerevisiae
Serpula lacrymansPiriformospora indica
Phytophthora sojae
Cryptococcus neoformans
Zea mays
Tuber melanosporum
Monodelphis domestica
Trichoplax adhaerens
Ectocarpus siliculosus
Sorghum bicolor
Drosophila melanogaster
Batrachochytrium dendrobatidis
Hydra magnipapillata
Chromobacterium violaceum
Laccaria bicolor
Schizophyllum commune
Scheffersomyces stipitis
Aspergillus fumigatus
Candida albicans
Micromonas pusilla
Enterocytozoon bieneusiEncephalitozoon intestinalis
Encephalitozoon romaleaeEncephalitozoon hellem
Encephalitozoon cuniculi MICROSPORIDIA
FUNGI(Ascomycetes)
FUNGI(Chytrids)
FUNGI(Basidiomycetes)
STREPTOPHYTAGREEN ALGAE
STRAMENOPILES
METAZOA
BACTERIA
0.96/-
1/801/100
0.2
1/96
1/96
0.81/-
1/99
1/-
1/97
1/98
1/100
1/96
0.92/-
0.91/-
1/100
0.98/85
1/72
0.93/-
1/100
1/88
1/89
1/100
0.92/-
0.93/-
0.91/-
1/89
1/100
1/88
1/93
1/99
1/920.98/81
0.93/84
Enterocytozoon bieneusi
Chlamydomonas reinhardtii shmt3
Populus trichocarpa shmt8
Neurospora crassa cyt
Tuber melanosporum
Glomerella graminicola
Arabidopsis thaliana shmt2
Thermobispora bispora
Saccharomyces cerevisiae
Chlamydomonas reinhardtii
Cavia porcellus cyt
Culex quinquefasciatus
Saccharomyces cerevisiae
Populus trichocarpa shmt3
Salmo salar mito
Sordaria macrospora
Bos taurus cyt
Aedes aegypti
Metarhizium anisopliae
Homo sapiens shmt2 mito
Phaeodactylum tricornutum
Xenopus tropicalis
Arabidopsis thaliana shmt3
Sporisorium reilianum
Neurospora crassa mito
Nodularia spumigena
Selaginella moellendorffii
Populus trichocarpa shmt1
Danio rerio cyt
Vitis vinifera mito
Citromicrobium bathyomarinum
Salpingoeca sp
Ustilago maydis
Glomerella graminicola
Glycine max mito
Bos taurus mito
Homo sapienscyt
Volvox carteri
Danio rerio mito
Oryza sativa mito
Tuber melanosporum
Oryza sativa mito
Chaetomium thermophilum
Chlamydomonas reinhardtii shmt2
Branchiostoma floridae
Desulfotalea psychrophila
Ectocarpus siliculosus
Melampsora larici
Phytophthora infestans mito
Coprinopsis cinereaMonosiga brevicollis
Micromonas pusilla
Hordeum vulgare
Gallus gallus cyt
Puccinia graminis
Phytophthora infestans shmt1 mito
Micromonas pusilla
Ectocarpus siliculosus
Populus trichocarpa shmt6
Lyngbya sp
Parasutterella excrementihominis
Encephalitozoon intestinalis
Encephalitozoon romaleaeEncephalitozoon hellem
Encephalitozoon cuniculi MICROSPORIDIA
FUNGI(Ascomycetes)
Mito.
Cyt.
STREPTOPHYTAGREEN ALGAE
STRAMENOPILES
METAZOA
Mito.
Cyt.
STREPTOPHYTAGREEN ALGAE
FUNGI(Basidiomycetes)
CHOANOFLAGELLATES
STRAMENOPILES
STREPTOPHYTA
BACTERIA
SHMT
0.2
1/95
1/99
0.98/-
1/100
1/100
1/-
1/100
1/74
1/99
1/100
1/-
1/100
0.98/- 1/100
1/100
0.94/-
1/90
1/76
1/99
0.84/-
1/85
1/100
1/971/99
1/76
1/100
1/96
1/100
1/99
0.99/-
1/100
1/-
0.97/84
1/92
1/97
0.83/-
1/100
1/100
1/70
0.99/-
1/100
1/100
1/94
1/96
0.83/-
0.89/84
1/83
1/92
1/98
1/100
0.87/93
1/97
1/100
1/100
1/100
1/95