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Page 1: )4-4 .0-&$6-3 */'03.5*0/ - HSLSfiles.hsls.pitt.edu/files/molbio/licensed_tools.pdf · 500-4 MICROARRAY GENES PROTEINS & DISEASES PATHWAYS GENETIC ... -Downstream Effects-Networks

HSLSMOLECULARBIOLOGYINFORMATIONSERVICE

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PROTEINS &DISEASES

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VARIATION

SANGERSEQUENCEANALYSIS

NEXT GENSEQUENCING

CLC Genomics Workbench-RNA-Seq-Exome Sequencing-Whole Genome Sequencing

Sequencher

-RNA-Seq-ChIP-Seq-Methylation Analysis

Partek

-RNA-Seq

Partek

GeneSpring-Clustering-PCA Plot-Statistical Analysis

MetaCore-Pathway Analysis

KEGG-Pathway Database

Ingenuity PathwayAnalysis -Gene Set Enrichment

-Upstream Regulation-Downstream Effects-Networks

ePath3D

Match /TRANSFAC

-TF Binding Site Prediction

NextBio Research-Gene Expression Data Annotation

HGMD-Human Gene Mutations

PGMD-Pharmacogenomics

BIOBASE-Transcription Factors-Promoter Sequence

Lasergene

-Primer Design-Sequence Alignment-In Silico Cloning-RNA Structure Prediction

Sequencher-Seq Assembly-Multiple Seq Align-SNP Detection

NextBio-Gene Expression

IPA Knowledge Base-Protein Interactions-Literature Findings

MetaCore-Literature Findings

-Clustering-PCA Plot-Statistical Analysis-Copy # Analysis

-Pathway Drawing

CLC Main Workbench

-Seq Manipulation-Protein Structure Prediction

www.hsls.pitt.edu/molbio

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