![Page 1: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/1.jpg)
Got Tissue?Got Tissue?How Arizona Created a Statewide How Arizona Created a Statewide Virtual Tissue BankVirtual Tissue Bank
Jim MatthewsArizona Biomedical Research Commission
Jungdae Kokotov5AM Solutions
July 27, 2010 www.5amsolutions.com
![Page 2: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/2.jpg)
Webinar Technical DetailsWebinar Technical Details
Type questions in advance; click send Questions + answers appear in chat window
During discussion time, “raise hand” to speak
![Page 3: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/3.jpg)
The Issue of TissueThe Issue of Tissue
Biospecimens are at the core of discovery-oriented scientific research.
Issues:Collecting
Annotating
Finding
Obtaining
![Page 4: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/4.jpg)
About ABRCAbout ABRC
![Page 5: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/5.jpg)
What Led Us HereWhat Led Us Here
![Page 6: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/6.jpg)
Our ProcessOur Process
The Solicitation
![Page 7: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/7.jpg)
Our VisionOur Vision
Sun Health Research Institute
![Page 8: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/8.jpg)
Arizona Biospecimen ConsortiumArizona Biospecimen Consortium
A Consortium of Institutional Partners
![Page 9: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/9.jpg)
Our ChallengesOur Challenges
Partnership buy-in
Synchronicity of technology + governance
![Page 10: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/10.jpg)
From Vision to Working SystemFrom Vision to Working System
Agile processes
Engaged stakeholders
5AM participation in Consortium meetings
![Page 11: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/11.jpg)
Biolocator: High Level WorkflowBiolocator: High Level Workflow
11
![Page 12: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/12.jpg)
How We Integrate – and Share – the DataHow We Integrate – and Share – the Data
ABLABL
Commercial BioBanking
Solution
Commercial BioBanking
Solution
Custom Application
Custom Application
CBM – NCI’s caGrid
CBM – NCI’s caGrid
Automatic data pull Periodic data import
![Page 13: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/13.jpg)
Share Information Over NCI’s caGridShare Information Over NCI’s caGrid
http://portal.training.cagrid.org/web/guest/home
![Page 14: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/14.jpg)
Our Technical ChallengesOur Technical Challenges
Mapping dataFields
Diverse systems, diverse data fields How do we find a common model…? NCI’s Common Biorepository Model
Values Diverse systems, diverse data values How do we find a common disease vocabulary…? SNOMED-CT
Collection DateQuality RatingSpecimen TypeTumor RatingDisease TypeLiquid NitrogenParaffin Block
Collection DateQuality RatingSpecimen TypeTumor RatingDisease TypeLiquid NitrogenParaffin Block
DateTimeTissue TypeCancer BooleanLab Report Freetext
DateTimeTissue TypeCancer BooleanLab Report Freetext
Malignant Tumor of BreastMalignant Tumor of Breast
Breast CarcinomaBreast Carcinoma
254837009254837009Breast CancerBreast CancerBreast Cancer Type 1 Susceptibility ProteinBreast Cancer Type 1 Susceptibility Protein
![Page 15: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/15.jpg)
https://demo.5amsolutions.com/tissuelocator-web/https://demo.5amsolutions.com/tissuelocator-web/
![Page 16: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/16.jpg)
ABRC’s Future Role in the Arizona Biomedical ConsortiumABRC’s Future Role in the Arizona Biomedical Consortium
Funding the ABL program
Demonstrating usefulness
Assisting institutional partnersEquipment
Personnel
Integration Support
![Page 17: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/17.jpg)
Next Steps for the Arizona Biospecimen ConsortiumNext Steps for the Arizona Biospecimen Consortium
Develop a Platform for Future ServicesCord blood bank
Cord blood patient registry
Trauma center data warehouse linkage
Expand our Partners + ParticipantsPhoenix Indian Medical Center
Phoenix VA
Others
![Page 18: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/18.jpg)
Contact UsContact Us
James MatthewsDeputy Director
Arizona Biomedical Resource Commission
Jungdae KokotovProject ManagerBiolocator
5AM Solutions
Arizona Biospecimen Locator Demo:https://demo.5amsolutions.com/tissuelocator-web/
![Page 19: Got Tissue? How Arizona Created a Statewide Virtual Tissue Bank](https://reader036.vdocument.in/reader036/viewer/2022062408/568142ca550346895daf1c1d/html5/thumbnails/19.jpg)
??????
What else would you like to discuss – open discussion of your questions, topics, concerns