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Principles of Structure
Dr. Helen Berman
September 11, 2002
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CONFIGURATION
To go from to a bond is broken
REPRESENTATION
•Ball and stick•Haworth•Fischer
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 249.
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Fischer Projections
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 68.
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Haworth Projection
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 248.
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Stereoisomers
n chiral centers yield 2n stereoisomers
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 69.
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Amino Acids
“corn crib”
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 68.
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D sugars
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 248.
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Torsion Angles
Dihedral Angles
Saenger, Wolfram. Principles of Nucleic Acid Structure.Springer-Verlag New York Inc., 1984, p. 15.
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Klyne Prelog
Other nomenclatures
Saenger, Wolfram. Principles of Nucleic Acid Structure.Springer-Verlag New York Inc., 1984, p. 16.
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Newman Projection
Creighton, Thomas. Proteins: Structures and Molecular Principles.W. H. Freeman and Company, 1984, p. 160.
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Cyclohexanes
Pyranose sugars
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, pp. 249-250.
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Water Structure
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 30.
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Water hydrogen bonding
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 30.
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Ice structure
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 31.
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Hydration of ions
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 32.
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Hydration of polar groups
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 33.
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Clathrate hydrates
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 179.
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Clathrate hydrates
Voet, Donald and Judith G. Biochemistry.John Wiley & Sons, 1990, p. 179.