france - european food safety authority

FRANCE

The Report referred to in Article 9 of Directive 2003/99/EC

TRENDS AND SOURCES OF ZOONOSES ANDZOONOTIC AGENTSIN HUMANS, FOODSTUFFS, ANIMALS ANDFEEDINGSTUFFS

including information on foodborne outbreaks,antimicrobial resistance in zoonotic agents and somepathogenic microbiological agents.

IN 2012

France - 2012 Report on trends and sources of zoonoses

INFORMATION ON THE REPORTING AND MONITORING SYSTEM

Country:

Reporting Year:

France

2012

France - 2012


PREFACEThis report is submitted to the European Commission in accordance with Article 9 of CouncilDirective 2003/99/ EC*. The information has also been forwarded to the European Food SafetyAuthority (EFSA).

The report contains information on trends and sources of zoonoses and zoonotic agents in

The information covers the occurrence of these diseases and agents in humans, animals,foodstuffs and in some cases also in feedingstuffs. In addition the report includes data onantimicrobial resistance in some zoonotic agents and commensal bacteria as well asinformation on epidemiological investigations of foodborne outbreaks. Complementary data onsusceptible animal populations in the country is also given. The information given covers bothzoonoses that are important for the public health in the whole European Community as well aszoonoses, which are relevant on the basis of the national epidemiological situation.The report describes the monitoring systems in place and the prevention and control strategiesapplied in the country. For some zoonoses this monitoring is based on legal requirements laiddown by the Community Legislation, while for the other zoonoses national approaches areapplied.The report presents the results of the examinations carried out in the reporting year. A nationalevaluation of the epidemiological situation, with special reference to trends and sources ofzoonotic infections, is given. Whenever possible, the relevance of findings in foodstuffs andanimals to zoonoses cases in humans is evaluated.The information covered by this report is used in the annual Community Summary Report onzoonoses that is published each year by EFSA.

France during the year 2012 .

* Directive 2003/ 99/ EC of the European Parliament and of the Council of 12 December 2003on the monitoring of zoonoses and zoonotic agents, amending Decision 90/ 424/ EEC andrepealing Council Directive 92/ 117/ EEC, OJ L 325, 17.11.2003, p. 31

France - 2012


List of Contents

1 ANIMAL POPULATIONS 12 INFORMATION ON SPECIFIC ZOONOSES AND ZOONOTIC AGENTS 8

92.1 SALMONELLOSIS92.1.1 General evaluation of the national situation92.1.2 Salmonella in foodstuffs

142.1.3 Salmonella in animals202.1.4 Salmonella in feedingstuffs262.2 CAMPYLOBACTERIOSIS262.2.1 General evaluation of the national situation262.2.2 Campylobacter in foodstuffs282.2.3 Antimicrobial resistance in Campylobacter isolates382.3 LISTERIOSIS382.3.1 General evaluation of the national situation382.3.2 Listeria in foodstuffs462.4 E. COLI INFECTIONS462.4.1 General evaluation of the national situation462.4.2 Escherichia coli, pathogenic in foodstuffs482.5 TUBERCULOSIS, MYCOBACTERIAL DISEASES482.5.1 General evaluation of the national situation482.5.2 Tuberculosis, mycobacterial diseases in humans492.5.3 Mycobacterium in animals532.6 BRUCELLOSIS532.6.1 General evaluation of the national situation532.6.2 Brucella in animals572.7 YERSINIOSIS572.7.1 General evaluation of the national situation572.8 TRICHINELLOSIS572.8.1 General evaluation of the national situation572.8.2 Trichinella in animals592.9 ECHINOCOCCOSIS592.9.1 General evaluation of the national situation592.9.2 Echinococcus in animals642.10 TOXOPLASMOSIS642.10.1 General evaluation of the national situation642.10.2 Toxoplasma in animals652.11 RABIES652.11.1 General evaluation of the national situation652.11.2 Lyssavirus (rabies) in animals692.12 STAPHYLOCOCCUS INFECTION692.12.1 General evaluation of the national situation

France - 2012


692.13 Q-FEVER692.13.1 General evaluation of the national situation692.14 WEST NILE VIRUS INFECTIONS692.14.1 General evaluation of the national situation692.14.2 West Nile Virus in animals

3 INFORMATION ON SPECIFIC INDICATORS OF ANTIMICROBIAL 74753.1 ESCHERICHIA COLI, NON-PATHOGENIC753.1.1 General evaluation of the national situation753.1.2 Antimicrobial resistance in Escherichia coli, non-pathogenic963.2 ENTEROCOCCUS, NON-PATHOGENIC963.2.1 General evaluation of the national situation963.2.2 Antimicrobial resistance in Enterococcus, non-pathogenic isolates

4 INFORMATION ON SPECIFIC MICROBIOLOGICAL AGENTS 1241254.1 CRONOBACTER1254.1.1 General evaluation of the national situation1254.2 HISTAMINE1254.2.1 General evaluation of the national situation1254.2.2 Histamine in foodstuffs1294.3 STAPHYLOCOCCAL ENTEROTOXINS1294.3.1 General evaluation of the national situation

5 FOODBORNE OUTBREAKS 130


1. ANIMAL POPULATIONS

The relevance of the findings on zoonoses and zoonotic agents has to be related to the size andnature of the animal population in the country.

1France - 2012

2


France - 2012

Table Susceptible animal populations

4099789 2010 121200 2010meat production animals1)

2281751 3715795 2010 82427 2010dairy cows and heifers2)

1491163 4982870 2007 158656 2007calves (under 1 year)3)

224514 4940539 24095402 192843 2010 - unspecified4)

1167625

Cattle (bovine animals)

unspecified5)

3166Deer farmed6)

41060100 12957000 2011 16201 2007meat production flocks7)

77832304 26786000 2011 21883 2007 - unspecified8)

36772200 13829000 2011 6703 2007

Ducks

foie gras production flocks9)

45793596 2010 73518 2010parent breeding flocks for eggproduction line

10)

345339008 76847528 2010 75776 2010laying hens11)

54085 771354180 141311584 2010 38400 2010broilers12)

805888130 275782944 2007 134581 2007 - unspecified13)

Gallus gallus (fowl)

Number of herds or flocks Number of slaughteredanimals

Livestock numbers (liveanimals) Number of holdings

Animal species Category of animals Data Year* Data Year* Data Year* Data Year*

* Only if different than current reporting year

3


France - 2012


18elite breeding flocks forbroiler production line - adult

14)

61elite breeding flocks forbroiler production line - duringrearing period

15)

1elite breeding flocks for eggproduction line - adult

16)

1elite breeding flocks for eggproduction line - duringrearing period

17)

262grandparent breeding flocksfor broiler production line -adult

18)

243grandparent breeding flocksfor broiler production line -during rearing period

19)

41grandparent breeding flocksfor egg production line - adult

20)

6grandparent breeding flocksfor egg production line -during rearing period

21)

4026laying hens - adult22)

3156laying hens - during rearingperiod - flocks under controlprogramme

23)

1856parent breeding flocks forbroiler production line - adult

24)

1290parent breeding flocks forbroiler production line - duringrearing period

25)

160parent breeding flocks for eggproduction line - adult

26)

Gallus gallus (fowl)




4


France - 2012


96Gallus gallus (fowl)parent breeding flocks for eggproduction line - duringrearing period

27)

250000 571000 2011 7915 2007Geese - unspecified28)

148723 977016 2010 14336 2010milk goats29)

24781 819113 1039857 15093 2010

Goats

- unspecified30)

23464400fattening pigs31)

1114920 2010 7898 2010breeding animals -unspecified - sows and gilts

32)

24122112 13818410 2010 22288 2010 - unspecified33)

657712 4277901 2010 8377 2010

Pigs

unspecified34)

4142872 2010 49918 2010meat production animals35)

560211 1387190 2010 5458 2010milk ewes36)

89250 4356329 5708141 34586 2007

Sheep

- unspecified37)

18529 632154 2011Solipeds, domestic horses38)

10479meat production flocks39)

50290800 23743000 2011 8016 2007 - unspecified40)Turkeys




5


France - 2012


Comments:1) Source : Agreste2) including sucker cows, Source : Agreste3) Source : Agreste4) Source : Agreste for slaughtered animals and holdings

Source : BDNI for flocks and animals5) mixed production animals and mixed herds, Source : Agreste6) Source : Agreste7) Source : Agreste8) Source : Agreste9) Source : Agreste

51grandparent breeding flocks -adult

41)

34grandparent breeding flocks -during rearing period

42)

912parent breeding flocks - adult43)

520

Turkeys

parent breeding flocks -during rearing period

44)

672Wild boars farmed45)

200Ratites (ostrich, emu,nandu) farmed

46)




6


France - 2012


Comments:10) Source : Agreste11) Source : Agreste12) Source : Agreste for slaughtered animals, animals and holdings Source : SIGAL for flocks13) Source : Agreste14) Source : SIGAL15) Source : SIGAL16) Source : SIGAL17) Source : SIGAL18) Source : SIGAL19) Source : SIGAL20) Source : SIGAL21) Source : SIGAL22) Source : SIGAL23) Source : SIGAL24) Source : SIGAL25) Source : SIGAL26) Source : SIGAL27) Source : SIGAL28) Source : Agreste29) including ram, Source : Agreste30) Source : Agreste for slaughtered animals and holdings

Source : BDNI for flocks and animals31) Source : Agreste

7


France - 2012


Comments:32) Source : Agreste33) Source : Agreste34) Source : Agreste35) Source : Agreste36) Source : BDNI for flocks and animals

Source : Agreste for holdings37) Source : Agreste for slaughtered animals and holdings

Source : BDNI for animals and flocks38) Source : Agreste39) Source : SIGAL40) Source : Agreste41) Source : SIGAL42) Source : SIGAL43) Source : SIGAL44) Source : SIGAL45) Source : Agreste46) Source : Agreste


2. INFORMATION ON SPECIFIC ZOONOSES AND ZOONOTIC AGENTS

Zoonoses are diseases or infections, which are naturally transmissible directly or indirectlybetween animals and humans. Foodstuffs serve often as vehicles of zoonotic infections.Zoonotic agents cover viruses, bacteria, fungi, parasites or other biological entities that arelikely to cause zoonoses.

8France - 2012

9


France - 2012

2.1 SALMONELLOSIS

2.1.1 General evaluation of the national situation

2.1.2 Salmonella in foodstuffs

Table Salmonella in poultry meat and products thereof

CCA -DGCCRF

Suspectsampling

Officialsampling

food sample> meat Unknown Single 25 g 32 1Meat from broilers (Gallus gallus) - fresh - at retail -

Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling

food sample> meat Unknown Single 25 g 3 0

Meat from broilers (Gallus gallus) - meat products -cooked, ready-to-eat - at retail - Surveillance

Source ofinformation

Samplingstrategy Sampler Sample type Sample origin Sampling unit Sample

weight Units testedTotal unitspositive forSalmonella

S. EnteritidisS.

Typhimurium

Meat from broilers (Gallus gallus) - fresh - at retail -Surveillance

Meat from broilers (Gallus gallus) - meat products -cooked, ready-to-eat - at retail - Surveillance

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified

10


France - 2012

11


France - 2012

Table Salmonella in milk and dairy products

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Single 25 g 283 0

Dairy products (excluding cheeses) - ice-cream -made from raw or low heat-treated milk - at retail -Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Unknown Single 25 g 28 0Dairy products (excluding cheeses) - dairy desserts -

at retail - Surveillance




S. EnteritidisS.

Typhimurium

Dairy products (excluding cheeses) - ice-cream -made from raw or low heat-treated milk - at retail -Surveillance

Dairy products (excluding cheeses) - dairy desserts -at retail - Surveillance

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified

12


France - 2012

Table Salmonella in red meat and products thereof

CCA/NRL Objectivesampling

Officialsampling

food sample> meat Domestic Single 25 g 334 7 0 1Meat from pig - fresh - at retail - Surveillance


Officialsampling

food sample> meat Domestic Single 10 g 165 9 1 2Meat from pig - minced meat - intended to be eaten

cooked - at retail - Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Single 25 g 2438 2Meat from pig - meat products - cooked, ready-to-

eat - at retail - Surveillance


Officialsampling

food sample> meat Domestic Single 25 g 247 2 0 0Meat from bovine animals - fresh - at retail -

Surveillance


Officialsampling

food sample> meat Domestic Single 25 g 16 0Meat from bovine animals - minced meat - intended

to be eaten raw - at retail - Surveillance


Officialsampling

food sample> meat Domestic Single 10 g 231 1 1

Meat from bovine animals - minced meat - intendedto be eaten cooked - at retail - Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Unknown Single 25 g 46 2

Meat from bovine animals - meat products - raw butintended to be eaten cooked - at retail - Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling

food sample> meat Unknown Single 25 g 183 4Meat from pig - meat preparation - intended to be

eaten cooked - at retail - Surveillance




S. EnteritidisS.

Typhimurium

1 5Meat from pig - fresh - at retail - Surveillance

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified

13


France - 2012

Table Salmonella in red meat and products thereof

1 5Meat from pig - minced meat - intended to be eatencooked - at retail - Surveillance

Meat from pig - meat products - cooked, ready-to-eat - at retail - Surveillance

1 1Meat from bovine animals - fresh - at retail -Surveillance

Meat from bovine animals - minced meat - intendedto be eaten raw - at retail - Surveillance

Meat from bovine animals - minced meat - intendedto be eaten cooked - at retail - Surveillance

Meat from bovine animals - meat products - raw butintended to be eaten cooked - at retail - Surveillance

Meat from pig - meat preparation - intended to beeaten cooked - at retail - Surveillance

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified

"Meat" includes fresh meat other than "minced meat" and "meat preparation". On row 15, the 2438 units were also tested for Listeria monocytogenes.

Footnote:

14


France - 2012

2.1.3 Salmonella in animals

Table Salmonella in breeding flocks of Gallus gallus

160 CensusOfficial and

industrysampling

environmental sample Domestic yes herd/flock 160 0

Gallus gallus (fowl) - breeding flocks for eggproduction line - adult - at farm - Control anderadication programmes


industrysampling

environmental sample Domestic no herd/flock 96 0

Gallus gallus (fowl) - breeding flocks for eggproduction line - during rearing period - at farm -Control and eradication programmes


industrysampling


Gallus gallus (fowl) - elite breeding flocks for broilerproduction line - adult - at farm - Control anderadication programmes


industrysampling


Gallus gallus (fowl) - elite breeding flocks for broilerproduction line - during rearing period - at farm -Control and eradication programmes


industrysampling


Gallus gallus (fowl) - elite breeding flocks for eggproduction line - adult - at farm - Control anderadication programmes


industrysampling


Gallus gallus (fowl) - elite breeding flocks for eggproduction line - during rearing period - at farm -Control and eradication programmes


industrysampling


Gallus gallus (fowl) - grandparent breeding flocks forbroiler production line - adult - at farm - Control anderadication programmes


industrysampling


Gallus gallus (fowl) - grandparent breeding flocks forbroiler production line - during rearing period - atfarm - Control and eradication programmes

No of flocksunder controlprogramme


Samplingstrategy Sampler Sample type Sample origin Target

VerificationSampling unit Units tested

Total unitspositive forSalmonella

S. Enteritidis

15


France - 2012



industrysampling


Gallus gallus (fowl) - grandparent breeding flocks foregg production line - adult - at farm - Control anderadication programmes


industrysampling


Gallus gallus (fowl) - grandparent breeding flocks foregg production line - during rearing period - at farm -Control and eradication programmes


industrysampling


Gallus gallus (fowl) - parent breeding flocks forbroiler production line - adult - at farm - Control anderadication programmes


industrysampling


Gallus gallus (fowl) - parent breeding flocks forbroiler production line - during rearing period - atfarm - Control and eradication programmes






S. Enteritidis

Gallus gallus (fowl) - breeding flocks for eggproduction line - adult - at farm - Control anderadication programmes

Gallus gallus (fowl) - breeding flocks for eggproduction line - during rearing period - at farm -Control and eradication programmes

Gallus gallus (fowl) - elite breeding flocks for broilerproduction line - adult - at farm - Control anderadication programmes

S. Hadar S. InfantisS.

Typhimurium S. Virchow S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified

S.Typhimurium,monophasic

16


France - 2012


1Gallus gallus (fowl) - elite breeding flocks for broilerproduction line - during rearing period - at farm -Control and eradication programmes

Gallus gallus (fowl) - elite breeding flocks for eggproduction line - adult - at farm - Control anderadication programmes

Gallus gallus (fowl) - elite breeding flocks for eggproduction line - during rearing period - at farm -Control and eradication programmes

2Gallus gallus (fowl) - grandparent breeding flocks forbroiler production line - adult - at farm - Control anderadication programmes

1

Gallus gallus (fowl) - grandparent breeding flocks forbroiler production line - during rearing period - atfarm - Control and eradication programmes

Gallus gallus (fowl) - grandparent breeding flocks foregg production line - adult - at farm - Control anderadication programmes

Gallus gallus (fowl) - grandparent breeding flocks foregg production line - during rearing period - at farm -Control and eradication programmes

1Gallus gallus (fowl) - parent breeding flocks forbroiler production line - adult - at farm - Control anderadication programmes

4 2Gallus gallus (fowl) - parent breeding flocks forbroiler production line - during rearing period - atfarm - Control and eradication programmes

S. Hadar S. InfantisS.

Typhimurium S. Virchow S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified


17


France - 2012


18


France - 2012

Table Salmonella in other poultry


industrysampling

environmental sample Domestic yes herd/flock 4026 57 26Gallus gallus (fowl) - laying hens - adult - at farm -

Control and eradication programmes


industrysampling

environmental sample Domestic no herd/flock 3156 3 3

Gallus gallus (fowl) - laying hens - during rearingperiod - flocks under control programme - at farm -Control and eradication programmes


industrysampling

environmental sample Domestic yes herd/flock 64563 321 93Other poultry - at farm - Control and eradication

programmes


industrysampling

environmental sample Domestic yes herd/flock 51 0Turkeys - grandparent breeding flocks - adult - at

farm - Control and eradication programmes


industrysampling


Turkeys - grandparent breeding flocks - duringrearing period - at farm - Control and eradicationprogrammes


industrysampling

environmental sample Domestic yes herd/flock 912 5 1Turkeys - parent breeding flocks - adult - at farm -

Control and eradication programmes


industrysampling


Turkeys - parent breeding flocks - during rearingperiod - at farm - Control and eradicationprogrammes






S. Enteritidis

32 3Gallus gallus (fowl) - laying hens - adult - at farm -Control and eradication programmes

S.Typhimurium S. 1,4,[5],12:i:

-

Salmonellaspp.,

unspecified


19


France - 2012

Table Salmonella in other poultry

Gallus gallus (fowl) - laying hens - during rearingperiod - flocks under control programme - at farm -Control and eradication programmes

191 37Other poultry - at farm - Control and eradicationprogrammes

Turkeys - grandparent breeding flocks - adult - atfarm - Control and eradication programmes

Turkeys - grandparent breeding flocks - duringrearing period - at farm - Control and eradicationprogrammes

2 2Turkeys - parent breeding flocks - adult - at farm -Control and eradication programmes

Turkeys - parent breeding flocks - during rearingperiod - at farm - Control and eradicationprogrammes

S.Typhimurium S. 1,4,[5],12:i:

-

Salmonellaspp.,

unspecified


20


France - 2012

2.1.4 Salmonella in feedingstuffs

Table Salmonella in compound feedingstuffs

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Domestic Single 100 g 2 0Compound feedingstuffs for pigs - final product - at

feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Domestic Single 100 g 46 0

Compound feedingstuffs for poultry (non specified) -final product - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Domestic Single 100 g 20 0Compound feedingstuffs for poultry - breeders - final

product - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Domestic Single 100 g 58 0Compound feedingstuffs for poultry - laying hens -

final product - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Domestic Single 100 g 74 0Compound feedingstuffs for poultry - broilers - final

product - at feed mill - Surveillance

CCA - DGAL Objectivesampling

Officialsampling feed sample Domestic Single 100 g 8 0Compound feedingstuffs for horses - final product -

at feed mill - Surveillance


Officialsampling feed sample Domestic Single 100 g 86 2 1Compound feedingstuffs for pigs - final product - at



Officialsampling feed sample Domestic Single 100 g 83 1



Officialsampling feed sample Domestic Single 100 g 7 0Compound feedingstuffs for rabbits - final product -



Officialsampling feed sample Domestic Single 100 g 3 0Compound feedingstuffs, not specified - final product

- at feed mill - Surveillance (petfood)




S. EnteritidisS.

Typhimurium

21


France - 2012

Table Salmonella in compound feedingstuffs

Compound feedingstuffs for pigs - final product - atfeed mill - Surveillance


Compound feedingstuffs for poultry - breeders - finalproduct - at feed mill - Surveillance

Compound feedingstuffs for poultry - laying hens -final product - at feed mill - Surveillance

Compound feedingstuffs for poultry - broilers - finalproduct - at feed mill - Surveillance

Compound feedingstuffs for horses - final product -at feed mill - Surveillance

1Compound feedingstuffs for pigs - final product - atfeed mill - Surveillance

1Compound feedingstuffs for poultry (non specified) -final product - at feed mill - Surveillance

Compound feedingstuffs for rabbits - final product -at feed mill - Surveillance

Compound feedingstuffs, not specified - final product- at feed mill - Surveillance (petfood)

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified

Analysis method : Rapid salmonella (BRD 07/11-12/05) valiated according to ISO 16140:2003 Standard.

Footnote:

22


France - 2012

Table Salmonella in feed material of animal origin


Officialsampling feed sample Domestic Single 100 g 1 0Feed material of land animal origin - dairy products -



Officialsampling feed sample Domestic Single 100 g 3 0Feed material of land animal origin - animal fat - at



Officialsampling feed sample Domestic Single 100 g 26 1Feed material of marine animal origin - fish meal - at



Officialsampling feed sample Domestic Single 100 g 5 0Feed material of marine animal origin - fish oil - at





S. EnteritidisS.

Typhimurium

Feed material of land animal origin - dairy products -at feed mill - Surveillance

0Feed material of land animal origin - animal fat - atfeed mill - Surveillance

1Feed material of marine animal origin - fish meal - atfeed mill - Surveillance

Feed material of marine animal origin - fish oil - atfeed mill - Surveillance

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified


Footnote:

23


France - 2012

Table Salmonella in other feed matter

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 3 0Feed material of cereal grain origin - barley derived -


CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 22 0Feed material of cereal grain origin - wheat derived -


CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 2 0Feed material of cereal grain origin - other cereal

grain derived - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 25 0Feed material of cereal grain origin - maize derived -


CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 39 0Feed material of oil seed or fruit origin - rape seed

derived - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 4 0Feed material of oil seed or fruit origin - palm kernel


CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 60 0Feed material of oil seed or fruit origin - soya (bean)


CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 18 0

Feed material of oil seed or fruit origin - sunflowerseed derived - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 4 2Feed material of oil seed or fruit origin - linseed


CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 2 0Other feed material - tubers, roots and similar

products - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 1 0Other feed material - other seeds and fruits - at feed

mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 6 0Other feed material - forages and roughages - at





S. EnteritidisS.

Typhimurium

24


France - 2012



Officialsampling feed sample Domestic Single 100 g 1 1Feed material of oil seed or fruit origin - soya (bean)


CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 2 0Other feed material - at feed mill - Surveillance

CCA -DGCCRF

Selectivesampling

Officialsampling feed sample Single 100 g 4 0Other feed material - yeast - at feed mill -

Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling feed sample Single 100 g 2 0Other feed material - yeast - at feed mill -

Surveillance




S. EnteritidisS.

Typhimurium

Feed material of cereal grain origin - barley derived -at feed mill - Surveillance

Feed material of cereal grain origin - wheat derived -at feed mill - Surveillance

Feed material of cereal grain origin - other cerealgrain derived - at feed mill - Surveillance

Feed material of cereal grain origin - maize derived -at feed mill - Surveillance

Feed material of oil seed or fruit origin - rape seedderived - at feed mill - Surveillance

Feed material of oil seed or fruit origin - palm kernelderived - at feed mill - Surveillance

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified

25


France - 2012


Feed material of oil seed or fruit origin - soya (bean)derived - at feed mill - Surveillance

Feed material of oil seed or fruit origin - sunflowerseed derived - at feed mill - Surveillance

2Feed material of oil seed or fruit origin - linseedderived - at feed mill - Surveillance

Other feed material - tubers, roots and similarproducts - at feed mill - Surveillance

Other feed material - other seeds and fruits - at feedmill - Surveillance

Other feed material - forages and roughages - atfeed mill - Surveillance

1Feed material of oil seed or fruit origin - soya (bean)derived - at feed mill - Surveillance

Other feed material - at feed mill - Surveillance

Other feed material - yeast - at feed mill -Surveillance

Other feed material - yeast - at feed mill -Surveillance

S. 1,4,[5],12:i:-

Salmonellaspp.,

unspecified


Footnote:

26


France - 2012

2.2 CAMPYLOBACTERIOSIS


2.2.2 Campylobacter in foodstuffs

Table Campylobacter in other food


Officialsampling

food sample> meat Domestic Single 1 g 334 0Meat from pig - fresh - at retail


Officialsampling

food sample> meat Domestic Single 1 g 247 0Meat from bovine animals - fresh - at retail


Officialsampling

food sample> meat Domestic Single 1 g 16 0Meat from bovine animals - minced meat - intended

to be eaten raw - at retail


Officialsampling

food sample> meat Domestic Single 1 g 231 0

Meat from bovine animals - minced meat - intendedto be eaten cooked - chilled - at retail - Surveillance


Officialsampling

food sample> meat Domestic Single 1 g 165 0Meat from pig - minced meat - intended to be eaten

cooked - chilled - at retail - Surveillance



weight Units tested

Total unitspositive for

Campylobacter

C. coli C. jejuni

Meat from pig - fresh - at retail

Meat from bovine animals - fresh - at retail

C. lari C. upsaliensis

ThermophilicCampylobact

er spp.,unspecified

27


France - 2012

Table Campylobacter in other food

Meat from bovine animals - minced meat - intendedto be eaten raw - at retail

Meat from bovine animals - minced meat - intendedto be eaten cooked - chilled - at retail - Surveillance

Meat from pig - minced meat - intended to be eatencooked - chilled - at retail - Surveillance

C. lari C. upsaliensis

ThermophilicCampylobact

er spp.,unspecified

"Meat" includes fresh meat other than "minced meat" and "meat preparation"

Footnote:

28


France - 2012

2.2.3 Antimicrobial resistance in Campylobacter isolates

Table Antimicrobial susceptibility testing of Campylobacter in Pigs

96 0 1 0Aminoglycosides - Gentamicin

96 39 1 1Fluoroquinolones - Ciprofloxacin

96 35 1 0Macrolides - Erythromycin

96 38 1 1Quinolones - Nalidixic acid

1 1Tetracyclines - Tetracycline

96 3 1 0Fully sensitive

96 36 1 0Resistant to 1 antimicrobial

96 45 1 1Resistant to 2 antimicrobials


C. coli C. jejuniCampylobacter

spp.,unspecified

yes yes

96 1

Antimicrobials:

Isolates out of a monitoringprogram (yes/no)

Number of isolates availablein the laboratory

Campylobacter

N n N n N n

number of multiresistant isolates calculated for gentamycin, ciprofloxacin, erythromycin and tetracycine (when available for tetracycine)

Footnote:

29


France - 2012

Table Antimicrobial susceptibility testing of Campylobacter in Gallus gallus (fowl)




78 49 49 23Quinolones - Nalidixic acid

78 72 49 24Tetracyclines - Tetracycline





78 2Resistant to 4 antimicrobials

C. coli C. jejuniCampylobacter

spp.,unspecified

yes yes

78 49

Antimicrobials:



Campylobacter

N n N n N n

number of multirestistant strains isolated calculated for gentamycin, ciprofloxacin, erythromycin and tetracycine

Footnote:

30


France - 2012

Table Antimicrobial susceptibility testing of C. coli in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications -Objective sampling - Official sampling - quantitative data [Dilution method]

2 78 0 2 4 67 5Aminoglycosides - Gentamicin

1 78 51 2 14 10 1 1 50Fluoroquinolones - Ciprofloxacin

32 78 49 1 12 13 1 2 26 23Quinolones - Nalidixic acid

2 78 72 4 1 1 1 71Tetracyclines - Tetracycline

16 78 12 38 20 7 1 12Macrolides - Erythromycin

Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications

yes

78

Antimicrobials:



C. coli

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048

Aminoglycosides - Gentamicin

Fluoroquinolones - Ciprofloxacin

Quinolones - Nalidixic acid

Tetracyclines - Tetracycline

Macrolides - Erythromycin

Gallus gallus(fowl) - broilers

- atslaughterhouse- Monitoring -

EFSAspecifications

yes

78

Antimicrobials:



C. coli

lowest highest

Concentration (µg/ml), number of isolates with a concentration of inhibition equal to

31


France - 2012

Table Antimicrobial susceptibility testing of C. coli in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications -Objective sampling - Official sampling - quantitative data [Dilution method]

32


France - 2012

Table Antimicrobial susceptibility testing of C. coli in Pigs - fattening pigs - at slaughterhouse - Monitoring - EFSA specifications - Objectivesampling - Official sampling - quantitative data [Dilution method]

2 96 0 10 80 6Aminoglycosides - Gentamicin

1 96 39 7 29 19 2 1 2 36Fluoroquinolones - Ciprofloxacin

32 96 38 34 22 1 1 18 20Quinolones - Nalidixic acid

2 96 88 6 1 1 4 4 13 67Tetracyclines - Tetracycline

16 96 35 25 28 7 1 35Macrolides - Erythromycin

Pigs - fattening pigs - at slaughterhouse - Monitoring - EFSA specifications

yes

96

Antimicrobials:



C. coli

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048






Pigs - fatteningpigs - at

slaughterhouse- Monitoring -

EFSAspecifications

yes

96

Antimicrobials:



C. coli

lowest highest


33


France - 2012

Table Antimicrobial susceptibility testing of C. coli in Pigs - fattening pigs - at slaughterhouse - Monitoring - EFSA specifications - Objectivesampling - Official sampling - quantitative data [Dilution method]

34


France - 2012

Table Antimicrobial susceptibility testing of C. jejuni - C. jejuni subsp. jejuni in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring -EFSA specifications - Objective sampling - Official sampling - quantitative data [Dilution method]

1 49 0 6 28 14 1Aminoglycosides - Gentamicin

2 49 2 39 8 1 1Aminoglycosides - Streptomycin

1 49 24 3 16 3 3 1 23Fluoroquinolones - Ciprofloxacin

16 49 23 1 19 5 1 5 18Quinolones - Nalidixic acid

2 49 24 19 4 1 1 24Tetracyclines - Tetracycline

Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications

yes

49

Antimicrobials:



C. jejuni subsp. jejuni

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048


Aminoglycosides - Streptomycin






EFSAspecifications

yes

49

Antimicrobials:



C. jejuni subsp. jejuni

lowest highest


35


France - 2012

Table Antimicrobial susceptibility testing of C. jejuni - C. jejuni subsp. jejuni in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring -EFSA specifications - Objective sampling - Official sampling - quantitative data [Dilution method]

36


France - 2012

Table Cut-off values used for antimicrobial susceptibility testing of C. coli in Animals

Standard methods used for testing

NCCLS/CLSI

EFSA 2Gentamicin

NON-EFSA

Aminoglycosides

Streptomycin

EFSA 1Fluoroquinolones Ciprofloxacin

EFSA 16Macrolides Erythromycin

32Quinolones Nalidixic acid

EFSA 2Tetracyclines Tetracycline

Concentration (microg/ml) Zone diameter (mm)

Standard Resistant > Resistant <=

Test Method Used

Broth dilution

37


France - 2012

Table Cut-off values used for antimicrobial susceptibility testing of C. jejuni in Animals


NCCLS/CLSI

EFSA 1Gentamicin

NON-EFSA

Aminoglycosides

Streptomycin

EFSA 1Fluoroquinolones Ciprofloxacin


16Quinolones Nalidixic acid




Test Method Used

Broth dilution

38


France - 2012

2.3 LISTERIOSIS


2.3.2 Listeria in foodstuffs

Table Listeria monocytogenes in milk and dairy products


Officialsampling food sample Domestic Single 25 g 129 2 129 2

Cheeses made from cows' milk - soft and semi-soft -made from raw or low heat-treated milk - atprocessing plant - Surveillance

CCA-DGCCRF

Suspectsampling


Cheeses made from cows' milk - soft and semi-soft -made from raw or low heat-treated milk - at retail -Surveillance



Cheeses made from cows' milk - soft and semi-soft -made from pasteurised milk - at processing plant -Surveillance

CCA-DGCCRF

Suspectsampling


Cheeses made from cows' milk - soft and semi-soft -made from pasteurised milk - at retail - Surveillance



Cheeses made from cows' milk - hard - made fromraw or low heat-treated milk - at processing plant -Surveillance



Cheeses made from cows' milk - hard - made frompasteurised milk - at processing plant - Surveillance



weight Units tested

Total unitspositive for L.monocytogen

es

Units testedwith detection

method

Listeriamonocytogenes presence

in x g

39


France - 2012




Cheeses made from goats' milk - soft and semi-soft -made from raw or low heat-treated milk - atprocessing plant - Surveillance

CCA -DGCCRF

Suspectsampling


Cheeses made from goats' milk - soft and semi-soft -made from raw or low heat-treated milk - at retail -Surveillance



Cheeses made from goats' milk - soft and semi-soft -made from pasteurised milk - at processing plant -Surveillance

CCA -DGCCRF

Suspectsampling


Cheeses made from goats' milk - soft and semi-soft -made from pasteurised milk - at retail - Surveillance



Cheeses made from sheep's milk - soft and semi-soft - made from raw or low heat-treated milk - atprocessing plant - Surveillance

CCA -DGCCRF

Suspectsampling


Cheeses made from sheep's milk - soft and semi-soft - made from raw or low heat-treated milk - atretail - Surveillance



Cheeses made from sheep's milk - soft and semi-soft - made from pasteurised milk - at processingplant - Surveillance

CCA -DGCCRF

Suspectsampling


Cheeses made from sheep's milk - soft and semi-soft - made from pasteurised milk - at retail -Surveillance



Cheeses made from sheep's milk - hard - made frompasteurised milk - at processing plant - Surveillance



weight Units tested


es


method


in x g

40


France - 2012




Cheeses made from cows' milk - fresh - made frompasteurised milk - at processing plant - Surveillance



Cheeses made from cows' milk - fresh - made fromraw or low heat-treated milk - at processing plant -Surveillance


Officialsampling food sample Domestic Single 25 g 8 0 8 0Cheeses made from cows' milk - hard - at

processing plant - Surveillance


Officialsampling food sample Domestic Single 25 g 4 0 4 0Cheeses made from cows' milk - soft and semi-soft -

at processing plant - Surveillance



Cheeses made from cows' milk - unspecified -made from pasteurised milk - at processing plant -Surveillance



Cheeses made from goats' milk - fresh - made frompasteurised milk - at processing plant - Surveillance



Cheeses made from goats' milk - fresh - made fromraw or low heat-treated milk - at processing plant -Surveillance



Cheeses made from sheep's milk - fresh - madefrom raw or low heat-treated milk - at processingplant - Surveillance


Officialsampling food sample Domestic Single 25 g 1 1 1 1Cheeses made from sheep's milk - hard - at

processing plant - Surveillance



weight Units tested


es


method


in x g

41


France - 2012


2 1 1Cheeses made from cows' milk - soft and semi-soft -made from raw or low heat-treated milk - atprocessing plant - Surveillance

277 2 1Cheeses made from cows' milk - soft and semi-soft -made from raw or low heat-treated milk - at retail -Surveillance

Cheeses made from cows' milk - soft and semi-soft -made from pasteurised milk - at processing plant -Surveillance

984 3 0Cheeses made from cows' milk - soft and semi-soft -made from pasteurised milk - at retail - Surveillance

54 4 1Cheeses made from cows' milk - hard - made fromraw or low heat-treated milk - at processing plant -Surveillance

Cheeses made from cows' milk - hard - made frompasteurised milk - at processing plant - Surveillance

Cheeses made from goats' milk - soft and semi-soft -made from raw or low heat-treated milk - atprocessing plant - Surveillance

15 0 0Cheeses made from goats' milk - soft and semi-soft -made from raw or low heat-treated milk - at retail -Surveillance

Cheeses made from goats' milk - soft and semi-soft -made from pasteurised milk - at processing plant -Surveillance

Units testedwith

enumerationmethod

> detectionlimit but <=100 cfu/g

L.monocytogen

es > 100cfu/g

42


France - 2012


4 0 0Cheeses made from goats' milk - soft and semi-soft -made from pasteurised milk - at retail - Surveillance

Cheeses made from sheep's milk - soft and semi-soft - made from raw or low heat-treated milk - atprocessing plant - Surveillance

15 0 0Cheeses made from sheep's milk - soft and semi-soft - made from raw or low heat-treated milk - atretail - Surveillance

Cheeses made from sheep's milk - soft and semi-soft - made from pasteurised milk - at processingplant - Surveillance

1 0 0Cheeses made from sheep's milk - soft and semi-soft - made from pasteurised milk - at retail -Surveillance

Cheeses made from sheep's milk - hard - made frompasteurised milk - at processing plant - Surveillance

Cheeses made from cows' milk - fresh - made frompasteurised milk - at processing plant - Surveillance

Cheeses made from cows' milk - fresh - made fromraw or low heat-treated milk - at processing plant -Surveillance

Cheeses made from cows' milk - hard - atprocessing plant - Surveillance

Cheeses made from cows' milk - soft and semi-soft -at processing plant - Surveillance

Units testedwith

enumerationmethod


L.monocytogen

es > 100cfu/g

43


France - 2012


Cheeses made from cows' milk - unspecified -made from pasteurised milk - at processing plant -Surveillance

Cheeses made from goats' milk - fresh - made frompasteurised milk - at processing plant - Surveillance

Cheeses made from goats' milk - fresh - made fromraw or low heat-treated milk - at processing plant -Surveillance

Cheeses made from sheep's milk - fresh - madefrom raw or low heat-treated milk - at processingplant - Surveillance

Cheeses made from sheep's milk - hard - atprocessing plant - Surveillance

Units testedwith

enumerationmethod


L.monocytogen

es > 100cfu/g

44


France - 2012

Table Listeria monocytogenes in other foods

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Single 25 g 3678 30 1542 30Meat from pig - meat products - cooked, ready-to-


CCA -DGCCRF

Suspectsampling

Officialsampling food sample Unknown Single 25 g 934 24 508 24Fish - smoked - at retail - Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Unknown Single 25 g 39 3 39 3Crustaceans - unspecified - cooked - at retail -

Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Single 25 g 4609 6 4 6Vegetables - pre-cut - ready-to-eat - at retail -

Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Single 25 g 222 0 0 0Juice - vegetable juice - pasteurised - at retail -

Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Single 25 g 405 2 103 2Meat from duck - meat products - cooked, ready-to-




weight Units tested


es


method


in x g

3678 28 2Meat from pig - meat products - cooked, ready-to-eat - at retail - Surveillance

934 24 0Fish - smoked - at retail - Surveillance

39 2 1Crustaceans - unspecified - cooked - at retail -Surveillance

4609 6 0Vegetables - pre-cut - ready-to-eat - at retail -Surveillance

Units testedwith

enumerationmethod


L.monocytogen

es > 100cfu/g

45


France - 2012

Table Listeria monocytogenes in other foods

222 0 0Juice - vegetable juice - pasteurised - at retail -Surveillance

405 1 1Meat from duck - meat products - cooked, ready-to-eat - at retail - Surveillance

Units testedwith

enumerationmethod


L.monocytogen

es > 100cfu/g

46


France - 2012

2.4 E. COLI INFECTIONS


2.4.2 Escherichia coli, pathogenic in foodstuffs

Table VT E. coli in food


Officialsampling

food sample> meat Domestic ISO/PRF TS

13136 Single 25 g 1923 7 3Meat from bovine animals - fresh - at processingplant - Surveillance

1)

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Real-Time

PCR Single 25 g 16 0 0Vegetables - pre-cut - ready-to-eat - at retail -Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Domestic Real-Time

PCR Single 25 g 387 0 0Seeds, sprouted - ready-to-eat - at retail -Surveillance

CCA -DGCCRF

Suspectsampling

Officialsampling food sample Unknown Real-Time

PCR Single 25 g 162 0 0Fruits and vegetables - non-pre-cut - at retail -Surveillance


Samplingstrategy Sampler Sample type Sample origin Analytical

MethodSampling unit Sample

weight Units tested


VerotoxigenicE. coli

(VTEC)


(VTEC) -VTEC O157

4 0Meat from bovine animals - fresh - at processingplant - Surveillance

1)

0 0Vegetables - pre-cut - ready-to-eat - at retail -Surveillance


(VTEC) -VTEC non-

O157


(VTEC) -VTEC,

unspecified

47


France - 2012

Table VT E. coli in food

Comments:1) In addition to the screening of the 5 VTEC serogroups listed in the ISO/PR TS 13136, screening for the presence of O45 VTEC and O121 VTEC was

performed by PCR according to the MLG-5B- Novembre 2011 method (FSIS). Strain isolation was only performed if vtx genes and eae gene and one ofthe 7 markers for the presence of O157, O26, O103, O111, O145, O45 and O121 VTEC were detected by PCR. No VTEC isolation was performed inother cases. The VTEC serogroups detected in fresh bovine meat were O103:H2 eae positive and stx1 positive (2), O26:H11 eae positive and stx2positive (2), O157:H7 eae positive, stx1 and stx2 positive (2), O157:H7 eae positive and stx2 positive (1).

0 0Seeds, sprouted - ready-to-eat - at retail -Surveillance

0 0Fruits and vegetables - non-pre-cut - at retail -Surveillance


(VTEC) -VTEC non-

O157


(VTEC) -VTEC,

unspecified

On row 25 the samples are not sprouted seeds .

Footnote:

48


France - 2012

2.5 TUBERCULOSIS, MYCOBACTERIAL DISEASES


2.5.2 Tuberculosis, mycobacterial diseases in humans

Table Mycobacterium in humans - Species/serotype distribution

12M. bovis

373M. tuberculosis

Cases Cases Inc. Autochthon cases

Autochthon Inc.

Importedcases

ImportedInc.

Species/serotype Distribution

Mycobacterium 385 0 0 0 0 0

The national reference centre for mycobacteria (CNR-MyRMA) coordinates a laboratory network and collect information on patients with tuberculosis bacteriologically confirmed (positive culture). Information on M. bovisis collected as part of this network. In 2011, among 385 strains of complex M. Tuberculosis mycobacteria received at the CNR-MyRMA, 12 were M. bovis.

Footnote:

49


France - 2012

2.5.3 Mycobacterium in animals

Table Tuberculosis in other animals

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 6 5 0 0 0Pigs

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 1598 85 33 0 40Badgers

NRL Suspectsampling

Notapplicable

animalsample >

organ/tissueAnimal 4 2 0 0 0Cats - pet animals - veterinary clinics - Clinical

investigations

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 489 389 280 0 71Cattle (bovine animals) - at slaughterhouse - Control

and eradication programmes

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 5 5 0 0 3Deer - wild - fallow deer - from hunting - Surveillance

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 301 27 1 0 21Deer - wild - red deer - from hunting - Surveillance

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 152 1 1 0 0Deer - wild - roe deer - from hunting - Surveillance

NRL Suspectsampling

Notapplicable

animalsample >

organ/tissueAnimal 9 1 0 1 0Dogs - pet animals - veterinary clinics - Clinical

investigations

NRL Suspectsampling

Notapplicable

animalsample >

organ/tissueAnimal 1 1 0 1 0Elephants - zoo animals - at zoo - Clinical

investigations

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 2 2 0 0 0Foxes - wild - from hunting - Surveillance


Samplingstrategy Sampler Sample type Sample origin Sampling unit Units tested


Mycobacterium

M. bovis M.tuberculosis

Mycobacterium spp.,

unspecified

50


France - 2012


NRL Suspectsampling

Notapplicable

animalsample >

organ/tissueAnimal 1 0 0 0 0Monkeys - veterinary clinics - Clinical investigations

NRL Suspectsampling

Notapplicable

animalsample >

nasal swabAnimal 8 2 0 0 2Sea lion - zoo animals - at zoo - Clinical

investigations

NRL Suspectsampling

Officialsampling

animalsample >

nasal swabAnimal 3 1 0 0 0Solipeds, domestic - horses - veterinary clinics -

Clinical investigations

NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueAnimal 1052 186 39 0 106Wild boars - wild - from hunting - Surveillance




Mycobacterium

M. bovis M.tuberculosis

Mycobacterium spp.,

unspecified

5 0 0Pigs

12 0 0Badgers

0 0 2Cats - pet animals - veterinary clinics - Clinicalinvestigations

38 0 0Cattle (bovine animals) - at slaughterhouse - Controland eradication programmes

2 0 0Deer - wild - fallow deer - from hunting - Surveillance

5 0 0Deer - wild - red deer - from hunting - Surveillance

M. aviumcomplex M. caprae M. microti

51


France - 2012


0 0 0Deer - wild - roe deer - from hunting - Surveillance

0 0 0Dogs - pet animals - veterinary clinics - Clinicalinvestigations

0 0 0Elephants - zoo animals - at zoo - Clinicalinvestigations

2 0 0Foxes - wild - from hunting - Surveillance

0 0 0Monkeys - veterinary clinics - Clinical investigations

0 0 0Sea lion - zoo animals - at zoo - Clinicalinvestigations

1 0 0Solipeds, domestic - horses - veterinary clinics -Clinical investigations

41 0 0Wild boars - wild - from hunting - Surveillance

M. aviumcomplex M. caprae M. microti

52


France - 2012

Table Bovine tuberculosis in countries and regions that do not receive Community co-financing for eradication programmes

Comments:1) N.A.

Herds Animals Number of herds % Number of herds %

Number oftuberculin tests

carried out beforethe introductioninto the herds

(Annex A(I)(2)(c)third indent (1) of

Directive64/432/EEC)

Number ofanimals withsuspiciouslesions of

tuberculosisexamined andsubmitted to

histopathologicaland

bacteriological

Number ofanimals detected

positive inbacteriologicalexamination

Total number of existing bovine Infected herdsOfficially free herds

Interval betweenroutine tuberculin

tests

Number ofanimals tested

Routine tuberculin testing

Region

224514 24095402 224055 99.8 169 .08 others, pleasespecify : cf. 678095 107435 166 18France

224514 24095402 224055 99.8 169 .08 N.A. 678095 107435 166 18Total :1)

If present, the row "Total -1" refers to analogous data of the previous year.

56 departements : no routine test10 departements : annual tests7 departements : tests every 2 years8 departements : tests every 3 years2 departements : tests every 4 years12 departements : no tests except in certain municipalities placed in annual screening due to the detection of a risk area

Footnote:

53


France - 2012

2.6 BRUCELLOSIS


2.6.2 Brucella in animals

Table Brucellosis in other animals

veterinaylaboratories

and NRL

Suspectsampling

Officialsampling

animalsample >

organ/tissueDomestic Herd 3 3 3Pigs

1)

veterinarylaboratories

and NRL

Suspectsampling

Officialsampling

animalsample >

organ/tissueDomestic Animal 55 1 1

Alpine chamois - wild - natural habitat - Clinicalinvestigations (locla clinical and serologicalinvestigations on hunting bag (around a cattleoutbreak of unknown origin))

2)

nationalsurveillancenetwork of

game deathcauses

(SAGIR) andNRL

Suspectsampling

Notapplicable

animalsample >

organ/tissueDomestic Animal 3 3 3Hares - in total - Surveillance (dead wild animals

surveillance)

3)


and NRL

Suspectsampling

Officialsampling

animalsample >


Other ruminants - wild - natural habitat - Clinicalinvestigations (local clinical and serologicalinvestigations on a endangered species (alpine ibex: capra ibex)around a cattle outbreak of unknownorigin)

4)


and NRL

Suspectsampling

Notapplicable

animalsample >

organ/tissueDomestic Animal 15 15 15Wild boars - wild - from hunting - Surveillance (local

investigations)

5)




BrucellaB. abortus B. melitensis B. suis

54


France - 2012

Table Brucellosis in other animals

Comments:1) investigation in pig herds with signs evocative of brucellosis (abortion, orchitis) and confirmed by serologybrucella suis biovar 22) one seropositive animal (brucella melitensis biovar 3)3) analysis by NRL, brucella suis biovar 2 (number of units initiallly tested unknown)4) 139 animals observed, 3 animals with clinical signs killed, 21 other animals captured for blood sampling, 12 seropositive animals out of 24 tested, 5

culture positive animals for brucella melitensis biovar 35) analysis by NRL, brucella suis biovar 2 (number of units initiallly tested unknown)

Pigs1)

Alpine chamois - wild - natural habitat - Clinicalinvestigations (locla clinical and serologicalinvestigations on hunting bag (around a cattleoutbreak of unknown origin))

2)

Hares - in total - Surveillance (dead wild animalssurveillance)

3)

Other ruminants - wild - natural habitat - Clinicalinvestigations (local clinical and serologicalinvestigations on a endangered species (alpine ibex: capra ibex)around a cattle outbreak of unknownorigin)

4)

Wild boars - wild - from hunting - Surveillance (localinvestigations)

5)

Brucella spp.,unspecified

55


France - 2012

Table Ovine or Caprine Brucellosis in countries and regions that do not receive Community co-financing for eradication programme

Comments:1) N.A.

Animals Number ofherds % Number of

herds

Number ofanimalstested

Number ofinfected herds

Region

% Number ofherds tested

Number ofanimals

tested withserologicalblood tests

Number ofanimalspositivemicrobiologically

Number ofsuspended

herds

Number ofanimalspositive

serologically

Number ofanimals

examinedmicrobiologically

Herds

Officially free herds Infected herds Investigations of suspect casesSurveillanceTotal number of existing

114031 6747998 113658 99.67 0 0 47970 1591114 0 18498 369 211 0 105France

114031 6747998 113658 99.67 0 0 47970 1591114 0 18498 369 211 0 105Total :1)


56


France - 2012

Table Bovine brucellosis in countries and regions that do not receive Community co-financing for eradication programme

Comments:1) N.A.

Animals Number ofherds % Number of

herds

Number ofanimalstested

Number ofinfectedherds

Region

%

Number ofbovineherdstested

Number ofbovineherdstested

Number ofnotified

abortionswhatever

cause

Number ofisolationsof Brucellainfection

Number ofanimals or

poolstested

Number ofinfectedherds

Herds

Examination of bulk milk Information about Epidemiological investigationSerological tests

Total number ofexisting bovine

Number ofabortions

due toBrucellaabortus

Number ofanimals

tested withserologicalblood tests

Number ofsuspended

herds

Number ofanimals

examinedmicrobiologically

Number ofanimalspositivemicrobiologically

Serologically BST

Officially free herds Infected herdsInvestigations of suspect casesSurveillance

Number of positiveanimals

224514 24095402 224432 99.96 2 0 127343 1414431 0 66829 61764 0 70853 0 0 3838 233 26 0 55 2France

224514 24095402 224432 99.96 2 0 127343 1414431 0 66829 61764 0 70853 0 0 3838 233 26 0 55 2Total :

1)


57


France - 2012

2.7 YERSINIOSIS


2.8 TRICHINELLOSIS


2.8.2 Trichinella in animals

Table Trichinella in animals

veterinaryservices

Objectivesampling

Officialsampling

animalsample >

organ/tissueDomestic Animal 81043 0

Pigs - fattening pigs - raised under controlledhousing conditions - at slaughterhouse -Surveillance

1)

veterinaryservices

Objectivesampling

Officialsampling

animalsample >


Pigs - fattening pigs - not raised under controlledhousing conditions - at slaughterhouse -Surveillance

2)

veterinaryservices

Objectivesampling

Officialsampling

animalsample >

organ/tissueDomestic Animal 343105 0Pigs - breeding animals

3)

veterinaryservices

Objectivesampling

Officialsampling

animalsample >

organ/tissueUnknown Animal 18374 0Solipeds, domestic - horses - at slaughterhouse -

Surveillance

4)

veterinaryservices

Objectivesampling

Officialsampling

animalsample >

organ/tissueDomestic Animal 861 0Wild boars - farmed - Surveillance

5)



Total unitspositive forTrichinella

T. spiralisTrichinella

spp.,unspecified

T. britovi

58


France - 2012

Table Trichinella in animals

Comments:1) at slaughterhouse2) at slaughterhouse (positive units are from freerange pigs from Corsica)3) at slaughterhouse4) at slaughterhouse5) at slaughterhouse6) from hunting, one positive boar hunted in Alpes-Maritimes (France), the other one in Spain

veterinaryservices

Objectivesampling

Officialsampling

animalsample >

organ/tissueAnimal 40746 2 2Wild boars - wild - Surveillance

6)

veterinaryservices

Suspectsampling

Officialsampling

animalsample >

organ/tissueDomestic Animal 1 1 1Wolves - wild - from hunting



Total unitspositive forTrichinella

T. spiralisTrichinella

spp.,unspecified

T. britovi

59


France - 2012

2.9 ECHINOCOCCOSIS


2.9.2 Echinococcus in animals

Table Echinococcus in animals

CCA/NRL Suspectsampling

Officialsampling

animalsample >

organ/tissueDomestic Animal France 848 47 47Cattle (bovine animals) - at slaughterhouse -

Surveillance


Officialsampling

animalsample >

organ/tissueDomestic Animal France 247 66 66Sheep - at slaughterhouse - Surveillance


Officialsampling

animalsample >

organ/tissueDomestic Animal France 7 0Goats - at slaughterhouse - Surveillance


Officialsampling

animalsample >

organ/tissueDomestic Animal France 96 69 69Pigs - at slaughterhouse - Surveillance

NRL Conveniencesampling

Notapplicable

animalsample >

faecesDomestic Animal Meurthe-et-

Moselle 201 0Dogs


Notapplicable

animalsample >


Moselle 70 0Cats


Notapplicable

animalsample >


Moselle 315 31 31Foxes - Monitoring1)


Notapplicable

animalsample >

organ/tissueDomestic Animal Meurthe-et-

Moselle 1 0Badgers - wild2)


Samplingstrategy Sampler Sample type Sample origin Sampling unit Region Units tested


EchinococcusE. granulosus E.

multilocularis

60


France - 2012



Notapplicable

animalsample >

organ/tissueDomestic Animal Ardennes 20 1 1Cats

3)


Notapplicable

animalsample >

organ/tissueDomestic Animal Moselle 1 0Coypu

4)


Notapplicable

animalsample >

organ/tissueDomestic Animal Bas-Rhin 1 1 1Coypu

5)


Notapplicable

animalsample >


Moselle 93 30 30Foxes - from hunting - Monitoring - active6)


Notapplicable

animalsample >

organ/tissueDomestic Animal Ille-et-Vilaine 84 5 5Foxes - wild - from hunting

7)


Notapplicable

animalsample >

organ/tissueDomestic Animal Morbihan 44 0Foxes - wild - from hunting - Monitoring - active

8)

nrl Conveniencesampling

Notapplicable

animalsample >

faecesUnknown Animal Moselle 18 0Lynx - zoo animal - Monitoring - active


Notapplicable

animalsample >

faecesDomestic Animal Moselle 6 0Other mustelides - wild - Monitoring - active (civet,

captive wildlife)


Notapplicable

animalsample >

faecesUnknown Animal Moselle 20 0Raccoons - zoo animal


Notapplicable

animalsample >

organ/tissueUnknown Animal Moselle 1 1 1Reptiles - zoo animal

9)


Notapplicable

animalsample >

organ/tissueDomestic Animal Moselle 37 8 8Voles - wild - unspecified - Monitoring - active

10)


Notapplicable

animalsample >


Moselle 1 0Wild boars - wild11)





multilocularis

61


France - 2012



Notapplicable

animalsample >

organ/tissueDomestic Animal Pyrénées-

Atlantiques 1 0Wild boars - wild12)


Notapplicable

animalsample >

faecesDomestic Animal Moselle 111 1 1Wolves - zoo animal - Monitoring - active





multilocularis

Cattle (bovine animals) - at slaughterhouse -Surveillance

Sheep - at slaughterhouse - Surveillance

Goats - at slaughterhouse - Surveillance

Pigs - at slaughterhouse - Surveillance

Dogs

Cats

Foxes - Monitoring1)

Badgers - wild2)

Cats3)

Coypu4)

Coypu5)

Foxes - from hunting - Monitoring - active6)

Echinococcusspp.,

unspecified

62


France - 2012


Comments:1) field collect2) organ : liver3) road accident, sample:intestine4) organ : liver5) organ : liver6) sample:intestine7) sample:intestine

Foxes - wild - from hunting7)

Foxes - wild - from hunting - Monitoring - active8)

Lynx - zoo animal - Monitoring - active

Other mustelides - wild - Monitoring - active (civet,captive wildlife)

Raccoons - zoo animal

Reptiles - zoo animal9)

Voles - wild - unspecified - Monitoring - active10)

Wild boars - wild11)

Wild boars - wild12)

Wolves - zoo animal - Monitoring - active

Echinococcusspp.,

unspecified

63


France - 2012


Comments:8) sample:intestine9) sample : liver

10) microtus arvalis, sample : liver11) sample : liver12) sample : liver

E.granulosus sensus lato includes E.granulosus-G1, -G2, -G3, E.canadensis G6-7 or E.ortleppi G5

Footnote:

64


France - 2012

2.10 TOXOPLASMOSIS


2.10.2 Toxoplasma in animals

Table Toxoplasma in animals


Officialsampling

food sample> meat

Imported fromoutside EU

Modifiedagglutinationtest (MAT)

Slaughterbatch 269 84 84Solipeds, domestic - horses - at border control -

Monitoring - active


Samplingstrategy Sampler Sample type Sample origin Analytical

MethodSampling unit Units tested


ToxoplasmaT. gondii

Toxoplasmaspp.,

unspecified

imported from America (Central, North and South)Mexique240 samples (76 positives)Canada16 samples (4 positives)Argentine 8 samples (3 positives)Australie 1 (1 positives)

Footnote:

65


France - 2012

2.11 RABIES


2.11.2 Lyssavirus (rabies) in animals

Table Rabies in animals

institutpasteur and

Anses

Suspectsampling

animalsample >

brainAnimal 6 0Cattle (bovine animals)

institutpasteur

Suspectsampling

animalsample >

brainAnimal 2 0Goats

institutpasteur and

Ans

Suspectsampling

animalsample >

brainAnimal 2 0Pigs

institutpasteur and

Ans

Suspectsampling

animalsample >

brainAnimal 3 0Solipeds, domestic

institutpasteur and

Ans

Suspectsampling

animalsample >

brainAnimal 659 0Dogs - stray dogs

institutpasteur and

Ans

Suspectsampling

animalsample >

brainAnimal 564 0Cats - stray cats

institutpasteur and

Ans

Suspectsampling

animalsample >

brainAnimal 228 5 4Bats - wild - Monitoring

1)

institutpasteur and

Ans

Suspectsampling

animalsample >

brainAnimal 43 0Foxes - wild - Monitoring



Total unitspositive forLyssavirus

(rabies)

Rabies virus(RABV) EBLV-1

66


France - 2012


Anses Suspectsampling

animalsample >

brainAnimal 1 0Coypu

institutpasteur

Suspectsampling

animalsample >

brainAnimal 2 0Deer

institutpasteur and

Anses

Suspectsampling

animalsample >

brainAnimal 9 0Ferrets

institutpasteur

Suspectsampling

animalsample >

brainAnimal 2 0Marten - wild

institutpasteur

Suspectsampling

animalsample >

brainAnimal 1 0Monkeys

institutpasteur

Suspectsampling

animalsample >

brainAnimal 1 0Rabbits

institutpasteur

Suspectsampling

animalsample >

brainAnimal 1 0Reptiles (lemur)

institutpasteur

Suspectsampling

animalsample >

brainAnimal 8 0Rodents

institutpasteur

Suspectsampling

animalsample >

brainAnimal 3 0Squirrels

institutpasteur

Suspectsampling

animalsample >

brainAnimal 1 0Weasel

institutpasteur

Suspectsampling

animalsample >

brainAnimal 2 0Wild boars



Total unitspositive forLyssavirus

(rabies)

Rabies virus(RABV) EBLV-1

67


France - 2012


Cattle (bovine animals)

Goats

Pigs

Solipeds, domestic

Dogs - stray dogs

Cats - stray cats

1Bats - wild - Monitoring1)

Foxes - wild - Monitoring

Coypu

Deer

Ferrets

Marten - wild

Monkeys

Rabbits

Reptiles (lemur)

Rodents

Squirrels

Weasel

Wild boars

EBLV-2Lyssavirus

(unspecifiedvirus)

Bokeloh BatLyssavirus

68


France - 2012


Comments:1) one positive bat for EBLV1 was sampled in Cher, one in Morbihan, one in Girone and one in Moselle. The positive bat for bokeloo bat lyssavirus was

found in Moselle

The Bokeloh Bat Lyssavirus (BBLV) was found in Myotis nattereri for the first time in north-eastern France in July 2012. This French isolate showed 98.7% nucleotide identity with the first BBLV strain isolated in 2010 inGermany. The results of Lyssavirus distribution investigation with the detection of infectious virus in the salivary glands suggested a possible transmission of the virus.

Footnote:

69


France - 2012

2.12 STAPHYLOCOCCUS INFECTION


2.13 Q-FEVER


2.14 WEST NILE VIRUS INFECTIONS


2.14.2 West Nile Virus in animals

Table West Nile Virus in Animals

CCA - NRL Suspectsampling

Officialsampling

animalsample >

bloodDomestic no ELISA Animal Hauts-de-

Seine 1 1Solipeds, domestic - horses - at farm - Monitoring -passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Corse 1 1Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Guyane 1 1Solipeds, domestic - horses - at farm - Clinical

investigations


Samplingstrategy Sampler Sample type Sample origin Vaccination

statusAnalyticalMethod

Sampling unit Region Units tested

Total unitspositive forWest Nile

Virus

70


France - 2012



Officialsampling

animalsample >

bloodDomestic no ELISA Animal Ain 2 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Aube 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Aveyron 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Bouches-du-

Rhône 5 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Charente-

Maritime 1 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Calvados 3 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Eure 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Gard 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Haute-

Garonne 1 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic ELISA Animal Hérault 2 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Jura 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Manche 1 0Solipeds, domestic - horses - at farm - Clinical

investigations






Virus

71


France - 2012



Officialsampling

animalsample >

bloodDomestic no ELISA Animal Haute-Marne 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Meurthe-et-

Moselle 1 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Morbihan 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Moselle 3 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Oise 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Orne 6 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Pas-de-

Calais 1 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Rhône 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Seine-

Maritime 2 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Seine-et-

Marne 3 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Yvelines 2 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Somme 1 0Solipeds, domestic - horses - at farm - Clinical

investigations






Virus

72


France - 2012



Officialsampling

animalsample >

bloodDomestic no ELISA Animal Tarn 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Vaucluse 2 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Vendée 2 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Haute-Vienne 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Vosges 1 0Solipeds, domestic - horses - at farm - Clinical

investigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Hauts-de-

Seine 1 0Solipeds, domestic - horses - at farm - Clinicalinvestigations


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Alpes-

Maritimes 1 1Solipeds, domestic - horses - at farm - Monitoring -passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Bouches-du-

Rhône 3 3Solipeds, domestic - horses - at farm - Monitoring -passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Calvados 9 8Solipeds, domestic - horses - at farm - Monitoring -

passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Corse 1 0Solipeds, domestic - horses - at farm - Monitoring -

passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Loiret 2 0Solipeds, domestic - horses - at farm - Monitoring -

passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Nièvre 1 0Solipeds, domestic - horses - at farm - Monitoring -

passive






Virus

73


France - 2012



Officialsampling

animalsample >

bloodDomestic no ELISA Animal Oise 15 0Solipeds, domestic - horses - at farm - Monitoring -

passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Orne 3 0Solipeds, domestic - horses - at farm - Monitoring -

passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Yvelines 4 0Solipeds, domestic - horses - at farm - Monitoring -

passive


Officialsampling

animalsample >

bloodDomestic no ELISA Animal Vienne 1 0Solipeds, domestic - horses - at farm - Monitoring -

passive






Virus


3. INFORMATION ON SPECIFIC INDICATORS OF ANTIMICROBIALRESISTANCE

74France - 2012

75


France - 2012

3.1 ESCHERICHIA COLI, NON-PATHOGENIC


3.1.2 Antimicrobial resistance in Escherichia coli, non-pathogenic

Table Antimicrobial susceptibility testing of E. coli in Pigs

200 19Amphenicols - Chloramphenicol

200 1Amphenicols - Florfenicol

200 44Penicillins - Ampicillin


E.coli, non-pathogenic,unspecified

yes

200

Antimicrobials:



Escherichia coli, non-pathogenic

N n

strains collected in 2011

Footnote:

76


France - 2012

Table Antimicrobial susceptibility testing of E. coli in Gallus gallus (fowl)

201 3Aminoglycosides - Gentamicin

201 81Aminoglycosides - Streptomycin



201 58Fluoroquinolones - Ciprofloxacin


201 59Quinolones - Nalidixic acid


201 83Trimethoprim

201 26Fully sensitive

201 27Resistant to 1 antimicrobial




201 75Resistant to >4 antimicrobials

201 21Cephalosporins - Cefotaxime

201 19Cephalosporins - Ceftazidim

201 116Sulfonamides - Sulfamethoxazole


yes

201

Antimicrobials:




N n

77


France - 2012

Table Antimicrobial susceptibility testing of E. coli in Gallus gallus (fowl)


Footnote:

78


France - 2012

Table Antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Gallus gallus (fowl) - broilers - before slaughter - Slaughterhouse(strains collectred in 2012)









201 85Trimethoprim

201 0Carbapenems - Meropenem



201 0Polymyxins - Colistin







yes

201

Antimicrobials:




N n

79


France - 2012

Table Antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Gallus gallus (fowl) - broilers - before slaughter - Slaughterhouse(strains collectred in 2012)



yes

201

Antimicrobials:




N n


Footnote:

80


France - 2012

Table Antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Rabbits (strains collected in 2012)









82 63Trimethoprim



82 9Fully sensitive









yes

82

Antimicrobials:




N n

81


France - 2012

Table Antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Rabbits (strains collected in 2012)


Footnote:

82


France - 2012

Table Antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Pigs (strains collected in 2012)









194 64Trimethoprim












yes

194

Antimicrobials:




N n

83


France - 2012

Table Antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Pigs (strains collected in 2012)


Footnote:

84


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring -EFSA specifications - Objective sampling - Official sampling - animal sample - caecum (strains collected in 2011) - quantitative data [Dilutionmethod]

2 201 3 0 0 71 117 10 1 0 0 2Aminoglycosides - Gentamicin

16 201 81 0 12 84 24 14 26 9 16 16Aminoglycosides - Streptomycin

16 201 13 1 23 156 8 2 1 2 3 5Amphenicols - Chloramphenicol

16 201 0 4 68 121 8 0 0Amphenicols - Florfenicol

0.25 201 21 1 39 103 33 4 0 0 3 18Cephalosporins - Cefotaxime

0.064 201 58 3 64 62 14 8 25 15 5 1 0 4Fluoroquinolones - Ciprofloxacin

8 201 117 7 49 26 2 0 0 0 4 113Penicillins - Ampicillin

16 201 59 5 105 29 2 1 4 7 29 19Quinolones - Nalidixic acid

8 201 153 7 35 5 1 1 19 74 57 2Tetracyclines - Tetracycline

2 201 83 2 30 48 36 2 0 0 0 83Trimethoprim

0.5 201 19 16 103 59 4 10 6 2 1 0Cephalosporins - Ceftazidim

64 201 116 5 20 44 16 1 0 0 0 115Sulfonamides - Sulfamethoxazole

Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications (strains collected in 2011)

yes

201

Antimicrobials:




Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048


85


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring -EFSA specifications - Objective sampling - Official sampling - animal sample - caecum (strains collected in 2011) - quantitative data [Dilutionmethod]

0.1 16Aminoglycosides - Gentamicin




0.02 2Cephalosporins - Cefotaxime

0.01 4Fluoroquinolones - Ciprofloxacin




0.1 16Trimethoprim

0.1 8Cephalosporins - Ceftazidim




EFSAspecifications

(strainscollected in

2011)

yes

201

Antimicrobials:




lowest highest

86


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Pigs - at slaughterhouse - Monitoring - EFSA specifications(strains collected in 2011) - quantitative data [Dilution method]



16 200 19 2 37 138 4 7 3 2 7 0Amphenicols - Chloramphenicol

16 200 1 4 55 130 10 0 1Amphenicols - Florfenicol


0.064 200 6 7 90 86 11 0 3 2 0 0 0 1Fluoroquinolones - Ciprofloxacin


16 200 6 5 125 63 1 0 0 1 2 3Quinolones - Nalidixic acid

8 200 127 28 40 3 2 2 16 71 36 2Tetracyclines - Tetracycline

2 200 77 4 21 51 47 0 0 0 0 77Trimethoprim



Pigs - at slaughterhouse - Monitoring - EFSA specifications (strains collected in 2011)

yes

200

Antimicrobials:




Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048


87


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Pigs - at slaughterhouse - Monitoring - EFSA specifications(strains collected in 2011) - quantitative data [Dilution method]

0.1 16Aminoglycosides - Gentamicin




0.02 2Cephalosporins - Cefotaxime

0.01 4Fluoroquinolones - Ciprofloxacin




0.1 16Trimethoprim

0.1 8Cephalosporins - Ceftazidim


Pigs - atslaughterhouse- Monitoring -

EFSAspecifications


2011)

yes

200

Antimicrobials:




lowest highest

88


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Gallus gallus (fowl) - broilers - Slaughterhouse - Domestic -Objective sampling - Official sampling (strains collected in 2012) - quantitative data [Dilution method]

2 201 201 138 59 3 1 0 0 0 0Aminoglycosides - Gentamicin

16 201 201 60 56 11 19 16 13 18 8Aminoglycosides - Streptomycin

16 201 201 57 116 18 0 3 2 1 4Amphenicols - Chloramphenicol


0.064 201 201 20 101 10 6 16 22 11 4 3 0 1 7Fluoroquinolones - Ciprofloxacin


16 201 201 108 23 0 1 8 14 19 28Quinolones - Nalidixic acid

0.125 201 201 201 0 0Carbapenems - Meropenem



Gallus gallus (fowl) - broilers - at slaughterhouse (strains collected in 2012)

yes

201

Antimicrobials:




Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048




- atslaughterhouse


2012)

yes

201

Antimicrobials:




lowest highest


89


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Gallus gallus (fowl) - broilers - Slaughterhouse - Domestic -Objective sampling - Official sampling (strains collected in 2012) - quantitative data [Dilution method]

Amphenicols - Chloramphenicol

Cephalosporins - Cefotaxime


Penicillins - Ampicillin


Carbapenems - Meropenem

Cephalosporins - Ceftazidim

Sulfonamides - Sulfamethoxazole


- atslaughterhouse


2012)

yes

201

Antimicrobials:




lowest highest


Footnote:

90


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Pigs - Slaughterhouse - Domestic - Objective sampling -Official sampling (strains collected in 2012) - quantitative data [Dilution method]











Pigs - at slaughterhouse (strains collected in 2012)

yes

194

Antimicrobials:




Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048



Pigs - atslaughterhouse


2012)

yes

194

Antimicrobials:




lowest highest


91


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Pigs - Slaughterhouse - Domestic - Objective sampling -Official sampling (strains collected in 2012) - quantitative data [Dilution method]









Pigs - atslaughterhouse


2012)

yes

194

Antimicrobials:




lowest highest


Footnote:

92


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Rabbits - Slaughterhouse - Domestic - Objective sampling -Official sampling (strains collected in 2012) - quantitative data [Dilution method]











Rabbits - at slaughterhouse (strains collected in 2012)

yes

82

Antimicrobials:




Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048



Rabbits - atslaughterhouse


2012)

yes

82

Antimicrobials:




lowest highest


93


France - 2012

Table Antimicrobial susceptibility testing of E.coli, non-pathogenic, unspecified in Rabbits - Slaughterhouse - Domestic - Objective sampling -Official sampling (strains collected in 2012) - quantitative data [Dilution method]









Rabbits - atslaughterhouse


2012)

yes

82

Antimicrobials:




lowest highest


Footnote:

94


France - 2012

Table Cut-off values used for antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Animals


NCCLS/CLSI

EFSA 2Gentamicin

EFSA 16

Aminoglycosides

Streptomycin

EFSA 16Chloramphenicol

16

Amphenicols

Florfenicol

EFSA 0.25Cefotaxime

0.5

Cephalosporins

Ceftazidim

NON-EFSA 0.064Fluoroquinolones Ciprofloxacin

EFSA 8Penicillins Ampicillin

EFSA 16Quinolones Nalidixic acid

NON-EFSASulfonamides

64

Sulfonamides

Sulfamethoxazole


EFSA 2Trimethoprim Trimethoprim



Test Method Used

Broth dilution

95


France - 2012

Table Cut-off values used for antimicrobial susceptibility testing of Escherichia coli, non-pathogenic in Animals

2Polymyxins Colistin

0.125Carbapenems Meropenem



96


France - 2012

3.2 ENTEROCOCCUS, NON-PATHOGENIC


3.2.2 Antimicrobial resistance in Enterococcus, non-pathogenic isolates

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Gallus gallus (fowl) - broilers - at slaughterhouse (strainscollected in 2011)


69 19 92 17Aminoglycosides - Streptomycin

69 4 92 1Amphenicols - Chloramphenicol


69 1 92 23Penicillins - Ampicillin



69 2 92 2Glycopeptides (Cyclic peptides, Polypeptides) -Daptomycin

69 1 92 0Glycopeptides (Cyclic peptides, Polypeptides) -Vancomycin

69 0 92 1Glycylcyclines - Tigecycline


69 1 92 0Oxazolidines - Linezolid


E. faecalis E. faecium

yes yes

69 92

Antimicrobials:



Enterococcus, non-pathogenic

N n N n

97


France - 2012

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Gallus gallus (fowl) - broilers - at slaughterhouse (strainscollected in 2011)




69 1 92 8Resistant to >4 antimicrobials

69 1 92 76Streptogramins - Quinupristin/Dalfopristin


yes yes

69 92

Antimicrobials:




N n N n


Footnote:

98


France - 2012

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Pigs - at slaughterhouse (strains collected in 2011)




















yes yes

12 44

Antimicrobials:




N n N n

99


France - 2012

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Pigs - at slaughterhouse (strains collected in 2011)


Footnote:

100


France - 2012

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Gallus gallus (fowl) (strains collected in 2012)









111 0 74 1Glycopeptides (Cyclic peptides, Polypeptides) -Teicoplanin












yes yes

111 108

Antimicrobials:




N n N n

101


France - 2012

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Gallus gallus (fowl) (strains collected in 2012)

102


France - 2012

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Pigs (strains collected in 2012)









9 0 30 0Glycopeptides (Cyclic peptides, Polypeptides) -Teicoplanin












yes yes

17 47

Antimicrobials:




N n N n

103


France - 2012

Table Antimicrobial susceptibility testing of Enterococcus, non-pathogenic in Pigs (strains collected in 2012)

104


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications(strains collected in 2011) - quantitative data [Dilution method]

32 68 68 1 0 19 41 6 0 0 0 0 1 0Aminoglycosides - Gentamicin


32 68 68 0 8 55 1 0 3 1Amphenicols - Chloramphenicol

4 68 68 1 4 55 4 2 0 0 1 1Fluoroquinolones - Ciprofloxacin

4 68 68 0 0 3 17 46 2 0 0 0 0Penicillins - Ampicillin

4 68 68 0 4 0 0 0 0 0 7 14 43 0Tetracyclines - Tetracycline

4 68 68 0 0 1 27 35 4 0 1 0Glycopeptides (Cyclic peptides, Polypeptides) -Daptomycin

4 68 68 1 2 27 24 14 0 0 0Glycopeptides (Cyclic peptides, Polypeptides) -Vancomycin

0.25 68 68 0 1 26 40 1 0 0 0Glycylcyclines - Tigecycline

4 68 68 2 3 2 11 6 2 1 7 1 1 32Macrolides - Erythromycin

4 68 68 1 9 58 0 0 0Oxazolidines - Linezolid

16 68 68 0 0 0 0 4 29 35 0 0Streptogramins - Quinupristin/Dalfopristin


yes

68

Antimicrobials:



E. faecalis

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048


105


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications(strains collected in 2011) - quantitative data [Dilution method]







Glycopeptides (Cyclic peptides, Polypeptides) -Daptomycin

Glycopeptides (Cyclic peptides, Polypeptides) -Vancomycin

Glycylcyclines - Tigecycline


Oxazolidines - Linezolid

Streptogramins - Quinupristin/Dalfopristin



EFSAspecifications


2011)

yes

68

Antimicrobials:



E. faecalis

lowest highest

106


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications(strains collected in 2011) - quantitative data [Dilution method]

32 92 92 3 9 50 29 1 0 0 0 0 0Aminoglycosides - Gentamicin













yes

92

Antimicrobials:



E. faecium

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048


107


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Gallus gallus (fowl) - broilers - at slaughterhouse - Monitoring - EFSA specifications(strains collected in 2011) - quantitative data [Dilution method]















EFSAspecifications


2011)

yes

92

Antimicrobials:



E. faecium

lowest highest

108


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Pigs - at slaughterhouse - Monitoring - EFSA specifications (strains collected in 2011)- quantitative data [Dilution method]














yes

44

Antimicrobials:



E. faecium

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048


109


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Pigs - at slaughterhouse - Monitoring - EFSA specifications (strains collected in 2011)- quantitative data [Dilution method]














EFSAspecifications


2011)

yes

44

Antimicrobials:



E. faecium

lowest highest

110


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Pigs - at slaughterhouse - Monitoring - EFSA specifications (strains collected in 2011)- quantitative data [Dilution method]














yes

12

Antimicrobials:



E. faecalis

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048


111


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Pigs - at slaughterhouse - Monitoring - EFSA specifications (strains collected in 2011)- quantitative data [Dilution method]














EFSAspecifications


2011)

yes

12

Antimicrobials:



E. faecalis

lowest highest

112


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Gallus gallus (fowl) - broilers (strains collected in 2012) - quantitative data [Dilutionmethod]


512 111 111 19 65 1 1 22 2 1Aminoglycosides - Streptomycin

32 111 111 6 97 2 1 4 1Amphenicols - Chloramphenicol



4 111 111 1 3 62 37 7 0 0 1Glycopeptides (Cyclic peptides, Polypeptides) -Daptomycin

4 111 111 3 46 51 11 0 0 0Glycopeptides (Cyclic peptides, Polypeptides) -Vancomycin

0.25 111 111 2 41 35 33 0 0 0Glycylcyclines - Tigecycline

4 111 111 17 14 3 1 5 11 9 2 49Macrolides - Erythromycin


16 111 111 0 1 1 4 68 35 2 0Streptogramins - Quinupristin/Dalfopristin

Gallus gallus (fowl) - broilers (strains collected in 2012)

yes

111

Antimicrobials:



E. faecalis

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048




2012)

yes

111

Antimicrobials:



E. faecalis

lowest highest


113


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Gallus gallus (fowl) - broilers (strains collected in 2012) - quantitative data [Dilutionmethod]













2012)

yes

111

Antimicrobials:



E. faecalis

lowest highest


Footnote:

114


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Gallus gallus (fowl) - broilers (strains collected in 2012) - quantitative data [Dilutionmethod]












Gallus gallus (fowl) - broilers (strains collected in 2012)

yes

108

Antimicrobials:



E. faecium

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048




2012)

yes

108

Antimicrobials:



E. faecium

lowest highest


115


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Gallus gallus (fowl) - broilers (strains collected in 2012) - quantitative data [Dilutionmethod]













2012)

yes

108

Antimicrobials:



E. faecium

lowest highest


Footnote:

116


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Pigs (strains collected in 2012) - quantitative data [Dilution method]












Pigs (strains collected in 2012)

yes

17

Antimicrobials:



E. faecalis

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048



Pigs (strainscollected in

2012)

yes

17

Antimicrobials:



E. faecalis

lowest highest


117


France - 2012

Table Antimicrobial susceptibility testing of E. faecalis in Pigs (strains collected in 2012) - quantitative data [Dilution method]











2012)

yes

17

Antimicrobials:



E. faecalis

lowest highest


Footnote:

118


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Pigs (strains collected in 2012) - quantitative data [Dilution method]












Pigs (strains collected in 2012)

yes

47

Antimicrobials:



E. faecium

Cut-offvalue N n <=0.002 <=0.004 0.008 0.015 0.016 0.03 0.06 0.12 0.25 0.5 1 2 4 8 16 32 64 128 256 512 >4096 1024 2048




2012)

yes

47

Antimicrobials:



E. faecium

lowest highest


119


France - 2012

Table Antimicrobial susceptibility testing of E. faecium in Pigs (strains collected in 2012) - quantitative data [Dilution method]











2012)

yes

47

Antimicrobials:



E. faecium

lowest highest


Footnote:

120


France - 2012

Table Cut-off values for antibiotic resistance of E. faecalis in Animals


NCCLS/CLSI

EFSA 32Gentamicin

EFSA 512

Aminoglycosides

Streptomycin

EFSA 32Amphenicols Chloramphenicol

EFSA 4Vancomycin

4

Glycopeptides (Cyclicpeptides, Polypeptides)

Daptomycin


EFSA 4Oxazolidines Linezolid


NON-EFSA 16Streptogramins Quinupristin/Dalfopristin

NON-EFSA 4Tetracyclines Tetracycline

4Fluoroquinolones Ciprofloxacin

0.25Glycylcyclines Tigecycline



Test Method Used

Broth dilution

121


France - 2012

Table Cut-off values for antibiotic resistance of E. faecalis in Animals

122


France - 2012

Table Cut-off values for antibiotic resistance of E. faecium in Animals


NCCLS/CLSI

EFSA 32Gentamicin

EFSA 128

Aminoglycosides

Streptomycin

EFSA 32Amphenicols Chloramphenicol

EFSA 4Vancomycin

4

Glycopeptides (Cyclicpeptides, Polypeptides)

Daptomycin


EFSA 4Oxazolidines Linezolid


EFSA 1Streptogramins Quinupristin/Dalfopristin

NON-EFSA 4Tetracyclines Tetracycline

4Fluoroquinolones Ciprofloxacin

0.25Glycylcyclines Tigecycline



Test Method Used

Broth dilution

123


France - 2012

Table Cut-off values for antibiotic resistance of E. faecium in Animals


4. INFORMATION ON SPECIFIC MICROBIOLOGICAL AGENTS

124France - 2012

125


France - 2012

4.1 CRONOBACTER


4.2 HISTAMINE


4.2.2 Histamine in foodstuffs

Table Histamine in food

CCA Objectivesampling


Fish - Fishery products from fish species associatedwith a high amount of histidine - not enzymematurated - at catering - Surveillance


Officialsampling food sample Imported from

outside EU Single 225 g 42 2 40 0Fish - Fishery products from fish species associatedwith a high amount of histidine - not enzymematurated - at catering - Surveillance


Officialsampling food sample Intra EU trade Single 225 g 10 0 10 0

Fish - Fishery products from fish species associatedwith a high amount of histidine - not enzymematurated - at catering - Surveillance



Fish - Fishery products from fish species associatedwith a high amount of histidine - not enzymematurated - at retail - Surveillance (at fishmonger)



weight Units testedTotal units in

non-conformity

<= 100 mg/kg>100 - <= 200mg/kg

126


France - 2012




outside EU Single 225 g 16 1 15 0







Fish - Fishery products from fish species associatedwith a high amount of histidine - not enzymematurated - at retail - Surveillance (at supermarket)



outside EU Single 225 g 35 0 35 0






Officialsampling food sample Unknown Single 225 g 12 0 12 0




weight Units testedTotal units in

non-conformity

<= 100 mg/kg>100 - <= 200mg/kg

127


France - 2012


0 0Fish - Fishery products from fish species associatedwith a high amount of histidine - not enzymematurated - at catering - Surveillance



0 0


0 1


0 0


2 0


0 0


>200 - <= 400mg/kg > 400 mg/kg

128


France - 2012


0 0


0 0


>200 - <= 400mg/kg > 400 mg/kg

Analytical method : HPLCRegarding the type of fish species associated with a high amount of histidine, the following species were particularly sampled : Scombridae, Clupeidae, Engraulidae, Coryfenidae, Pomatomidae, Scombresosidae

Footnote:

129

4.3 STAPHYLOCOCCAL ENTEROTOXINS



5. FOODBORNE

Foodborne outbreaks are incidences of two or more human cases of the same disease orinfection where the cases are linked or are probably linked to the same food source. Situation, inwhich the observed human cases exceed the expected number of cases and where a same foodsource is suspected, is also indicative of a foodborne outbreak.

130France - 2012


12 63 12 0 22 34Salmonella - S.Typhimurium

11 95 7 0 22 33Salmonella - S.Enteritidis

73 534 51 0 32 105Salmonella - Otherserovars

13 80 8 0 5 18Campylobacter

0 unknown unknown unknown 0 0Listeria - Listeriamonocytogenes

0 unknown unknown unknown 0 0Listeria - OtherListeria

2 5 0 0 0 2Yersinia

2 12 1 0 0 2Escherichia coli,pathogenic -Verotoxigenic E. coli(VTEC)

198 1673 115 3 20 218Bacillus - B. cereus

0 unknown unknown unknown 0 0Bacillus - OtherBacillus

291 1842 175 1 9 300Staphylococcalenterotoxins

0 unknown unknown unknown 2 2Clostridium - Cl.botulinum

67 1105 15 0 23 90Clostridium - Cl.perfringens

Weak evidence or no vehicle outbreaks

Num

ber o

f out

brea

ks

Hum

an c

ases

Hos

pita

lized

Dea

ths

Stro

ng e

vide

nce

Num

ber o

fO

utbr

eaks

Tota

l num

ber o

f out

brea

ks

Table Foodborne Outbreaks: summarised data

131France - 2012


0 unknown unknown unknown 0 0Clostridium - OtherClostridia

0 unknown unknown unknown 1 1Other Bacterial agents- Brucella

0 unknown unknown unknown 2 2Other Bacterial agents- Shigella

0 unknown unknown unknown 1 1Other Bacterial agents- Other Bacterialagents

0 unknown unknown unknown 0 0Parasites - Trichinella

0 unknown unknown unknown 0 0Parasites - Giardia

0 unknown unknown unknown 0 0Parasites -Cryptosporidium

0 unknown unknown unknown 0 0Parasites - Anisakis

0 unknown unknown unknown 0 0Parasites - OtherParasites

1 9 9 1 12 13Viruses - Norovirus

0 unknown unknown unknown 2 2Viruses - Hepatitisviruses

33 631 28 0 0 33Viruses - OtherViruses

28 91 20 0 13 41Other agents -Histamine

28 107 2 0 12 40Other agents - Marinebiotoxins

0 unknown unknown unknown 1 1Other agents - OtherAgents


Num

ber o

f out

brea

ks

Hum

an c

ases

Hos

pita

lized

Dea

ths

Stro

ng e

vide

nce

Num

ber o

fO

utbr

eaks

Tota

l num

ber o

f out

brea

ks

132France - 2012


312 1642 84 0 3 315Unknown agent


Num

ber o

f out

brea

ks

Hum

an c

ases

Hos

pita

lized

Dea

ths

Stro

ng e

vide

nce

Num

ber o

fO

utbr

eaks

Tota

l num

ber o

f out

brea

ks

133France - 2012


B. cereus

12_971_001FBO Code

1Number of outbreaks

10Number of human cases

1Number of hospitalisations

0Number of deaths

Pig meat and products thereofFood vehicleMore food vehicleinformation

Detection of causative agent in food vehicle or its component - Symptoms and onsetof illness pathognomonic to causative agentNature of evidence

Household / domestic kitchenOutbreak type

Household / domestic kitchenSetting

UnknownPlace of origin of problem

UnknownOrigin of food vehicle

UnknownContributory factorsMixed Outbreaks (OtherAgent)Additional information

Value

Table Foodborne Outbreaks: detailed data for BacillusPlease use CTRL for multiple selection fields

134France - 2012


B. cereus

12_094_019FBO Code




0Number of deaths

Fish and fish productsFood vehicleMore food vehicleinformation


GeneralOutbreak type

School, kindergartenSetting




Value

135France - 2012


B. cereus

12_092_003FBO Code




0Number of deaths




Canteen or workplace cateringSetting




Value

136France - 2012


B. cereus

12_080_009FBO Code




0Number of deaths

Cereal products including rice and seeds/pulses (nuts, almonds)Food vehicleMore food vehicleinformation







Value

137France - 2012


B. cereus

12_077_003FBO Code




0Number of deaths

Mixed foodFood vehicleMore food vehicleinformation



Restaurant, Cafe, Pub, Bar, HotelSetting



Inadequate chillingContributory factorsMixed Outbreaks (OtherAgent)Additional information

Value

138France - 2012


B. cereus

12_076_018FBO Code




0Number of deaths








Value

139France - 2012


B. cereus

12_075_105FBO Code




0Number of deaths








Value

140France - 2012


B. cereus

12_063_004FBO Code




0Number of deaths




Other settingSetting




Value

141France - 2012


B. cereus

12_006_016FBO Code




0Number of deaths








Value

142France - 2012


B. cereus

12_006_008FBO Code




0Number of deaths








Value

143France - 2012


B. cereus

12_059_009FBO Code




0Number of deaths

Turkey meat and products thereofFood vehicleMore food vehicleinformation







Value

144France - 2012


B. cereus

12_047_001FBO Code




0Number of deaths

Eggs and egg productsFood vehicleMore food vehicleinformation







Value

145France - 2012


B. cereus

12_042_009FBO Code




0Number of deaths

Other or mixed red meat and products thereofFood vehicleMore food vehicleinformation







Value

146France - 2012


B. cereus

12_040_010FBO Code




0Number of deaths








Value

147France - 2012


B. cereus

12_031_004FBO Code




0Number of deaths

CheeseFood vehicleMore food vehicleinformation







Value

148France - 2012


B. cereus

12_030_013FBO Code




0Number of deaths








Value

149France - 2012


B. cereus

652576FBO Code




0Number of deaths








Value

150France - 2012


B. cereus

12_017_006FBO Code




0Number of deaths

Cereal products including rice and seeds/pulses (nuts, almonds)Food vehicleMore food vehicleinformation







Value

151France - 2012


B. cereus

652346FBO Code




0Number of deaths




Residential institution (nursing home, prison, boarding school)Setting




Value

152France - 2012


B. cereus

12_013_028FBO Code




0Number of deaths








Value

153France - 2012


Campylobacter spp., unspecified

653616FBO Code




0Number of deaths

Broiler meat (Gallus gallus) and products thereofFood vehicleMore food vehicleinformation

Descriptive epidemiological evidenceNature of evidence




DomesticOrigin of food vehicle


Value

Table Foodborne Outbreaks: detailed data for CampylobacterPlease use CTRL for multiple selection fields

154France - 2012


C. jejuni

12_076_012FBO Code




0Number of deaths

Bovine meat and products thereofFood vehicleMore food vehicleinformation







Value

155France - 2012


C. jejuni

12_062_009FBO Code




0Number of deaths








Value

156France - 2012


C. jejuni

651031FBO Code




0Number of deaths








Value

157France - 2012


C. jejuni

651027FBO Code




0Number of deaths








Value

158France - 2012


C. perfringens

12_092_028FBO Code




0Number of deaths








Value

Table Foodborne Outbreaks: detailed data for ClostridiumPlease use CTRL for multiple selection fields

159France - 2012


C. perfringens

12_089_003FBO Code




0Number of deaths








Value

160France - 2012


C. perfringens

12_082_003FBO Code




0Number of deaths








Value

161France - 2012


C. perfringens

12_075_068FBO Code




0Number of deaths








Value

162France - 2012


C. perfringens

12_075_064FBO Code




0Number of deaths

Vegetables and juices and other products thereofFood vehicleMore food vehicleinformation







Value

163France - 2012


C. perfringens

12_075_061FBO Code




0Number of deaths








Value

164France - 2012


C. perfringens

12_075_054FBO Code




0Number of deaths








Value

165France - 2012


C. perfringens

12_072_005FBO Code




0Number of deaths








Value

166France - 2012


C. perfringens

12_061_003FBO Code




0Number of deaths








Value

167France - 2012


C. perfringens

12_056_011FBO Code




0Number of deaths

Other, mixed or unspecified poultry meat and products thereofFood vehicleMore food vehicleinformation







Value

168France - 2012


C. perfringens

12_053_003FBO Code




0Number of deaths








Value

169France - 2012


C. perfringens

12_053_002FBO Code




0Number of deaths








Value

170France - 2012


C. perfringens

12_046_001FBO Code




0Number of deaths








Value

171France - 2012


C. perfringens

652895FBO Code




0Number of deaths








Value

172France - 2012


C. perfringens

12_034_018FBO Code




0Number of deaths








Value

173France - 2012


C. perfringens

12_031_005FBO Code




0Number of deaths








Value

174France - 2012


C. perfringens

12_030_017FBO Code




0Number of deaths







Unprocessed contaminated ingredientContributory factorsMixed Outbreaks (OtherAgent)Additional information

Value

175France - 2012


C. perfringens

656246FBO Code




0Number of deaths








Value

176France - 2012


C. perfringens

12_014_004FBO Code




0Number of deaths








Value

177France - 2012


C. perfringens

654168FBO Code




0Number of deaths








Value

178France - 2012


C. perfringens

12_013_011FBO Code




0Number of deaths








Value

179France - 2012


C. perfringens

12_001_010FBO Code




0Number of deaths








Value

180France - 2012


C. perfringens

12_001_008FBO Code




0Number of deaths








Value

181France - 2012


C. botulinum

12_072_009FBO Code




0Number of deaths

Vegetables and juices and other products thereofFood vehicleMore food vehicleinformation







Value

182France - 2012


C. botulinum

655157FBO Code




0Number of deaths

Canned food productsFood vehicleMore food vehicleinformation

Detection of causative agent in food vehicle or its component - Detection ofindistinguishable causative agent in humansNature of evidence






Value

183France - 2012


Brucella

656991FBO Code




0Number of deaths








Value

Table Foodborne Outbreaks: detailed data for Other Bacterial agentsPlease use CTRL for multiple selection fields

184France - 2012


Francisella

656993FBO Code




0Number of deaths







Infected food handlerContributory factorsMixed Outbreaks (OtherAgent)Additional information

Value

185France - 2012


Shigella

650478FBO Code




0Number of deaths








Value

186France - 2012


Shigella

656173FBO Code




0Number of deaths








Value

187France - 2012


Histamine

12_974_014FBO Code




0Number of deaths








Value

Table Foodborne Outbreaks: detailed data for Other agentsPlease use CTRL for multiple selection fields

188France - 2012


Histamine

12_075_047FBO Code




0Number of deaths








Value

189France - 2012


Histamine

12_075_042FBO Code




0Number of deaths








Value

190France - 2012


Histamine

12_056_008FBO Code




0Number of deaths








Value

191France - 2012


Histamine

652941FBO Code




0Number of deaths








Value

192France - 2012


Histamine

12_033_036FBO Code




0Number of deaths








Value

193France - 2012


Histamine

12_031_008FBO Code




0Number of deaths








Value

194France - 2012


Histamine

652403FBO Code




0Number of deaths








Value

195France - 2012


Histamine

12_030_003FBO Code




0Number of deaths








Value

196France - 2012


Histamine

12_029_001FBO Code




0Number of deaths








Value

197France - 2012


Histamine

12_017_018FBO Code




0Number of deaths








Value

198France - 2012


Marine biotoxins

12_972_010FBO Code




0Number of deaths








Value

199France - 2012


Marine biotoxins

12_972_007FBO Code




0Number of deaths








Value

200France - 2012


Marine biotoxins

12_971_017FBO Code




0Number of deaths








Value

201France - 2012


Marine biotoxins

12_971_014FBO Code




0Number of deaths








Value

202France - 2012


Marine biotoxins

12_971_012FBO Code




0Number of deaths








Value

203France - 2012


Marine biotoxins

12_971_011FBO Code




0Number of deaths








Value

204France - 2012


Marine biotoxins

12_971_010FBO Code




0Number of deaths








Value

205France - 2012


Marine biotoxins

12_971_009FBO Code




0Number of deaths








Value

206France - 2012


Marine biotoxins

12_971_007FBO Code




0Number of deaths








Value

207France - 2012


Marine biotoxins

12_971_005FBO Code




0Number of deaths








Value

208France - 2012


Marine biotoxins

12_017_008FBO Code




0Number of deaths

Crustaceans, shellfish, molluscs and products thereofFood vehicleMore food vehicleinformation







Value

209France - 2012


Marine biotoxins

12_017_009FBO Code




0Number of deaths








Value

210France - 2012


Atropine

12_083_027FBO Code




0Number of deaths







UnknownContributory factorsMixed Outbreaks (OtherAgent)

Atropine : waiting for adding in EFSA databaseAdditional information

Value

211France - 2012


null

12_085_012FBO Code




0Number of deaths








Value

Table Foodborne Outbreaks: detailed data for SalmonellaPlease use CTRL for multiple selection fields

212France - 2012


null

12_085_014FBO Code




0Number of deaths








Value

213France - 2012


null

12_085_013FBO Code




0Number of deaths








Value

214France - 2012


null

652353FBO Code




0Number of deaths








Value

215France - 2012


null

651963FBO Code




0Number of deaths








Value

216France - 2012


null

652343FBO Code




0Number of deaths








Value

217France - 2012


null

651961FBO Code




0Number of deaths








Value

218France - 2012


null

651441FBO Code




0Number of deaths








Value

219France - 2012


null

652061FBO Code




0Number of deaths








Value

220France - 2012


null

653954FBO Code




0Number of deaths








Value

221France - 2012


null

653824FBO Code




0Number of deaths








Value

222France - 2012


null

12_063_017FBO Code




0Number of deaths








Value

223France - 2012


null

12_063_016FBO Code




0Number of deaths








Value

224France - 2012


null

12_050_005FBO Code




0Number of deaths








Value

225France - 2012


null

652153FBO Code




0Number of deaths








Value

226France - 2012


null

652205FBO Code




0Number of deaths








Value

227France - 2012


null

12_030_010FBO Code




0Number of deaths








Value

228France - 2012


null

653815FBO Code




0Number of deaths








Value

229France - 2012


null

12_029_007FBO Code




0Number of deaths








Value

230France - 2012


null

12_029_006FBO Code




0Number of deaths








Value

231France - 2012


null

653169FBO Code




0Number of deaths

Other foodsFood vehicleMore food vehicleinformation







Value

232France - 2012


null

651971FBO Code




0Number of deaths








Value

233France - 2012


null

651950FBO Code




0Number of deaths








Value

234France - 2012


null

12_024_003FBO Code




0Number of deaths








Value

235France - 2012


null

12_014_009FBO Code




0Number of deaths








Value

236France - 2012


null

654621FBO Code




0Number of deaths








Value

237France - 2012


Salmonella spp., unspecified

12_973_001FBO Code




0Number of deaths








Value

238France - 2012



12_972_008FBO Code




0Number of deaths








Value

239France - 2012



653506FBO Code




0Number of deaths








Value

240France - 2012



653539FBO Code




0Number of deaths








Value

241France - 2012



656249FBO Code




0Number of deaths








Value

242France - 2012



12_083_012FBO Code




0Number of deaths








Value

243France - 2012



12_078_010FBO Code




0Number of deaths








Value

244France - 2012



12_078_009FBO Code




0Number of deaths








Value

245France - 2012



12_075_045FBO Code




0Number of deaths








Value

246France - 2012



12_075_044FBO Code




0Number of deaths








Value

247France - 2012



12_074_004FBO Code




0Number of deaths








Value

248France - 2012



654818FBO Code




0Number of deaths








Value

249France - 2012



12_007_004FBO Code




0Number of deaths








Value

250France - 2012



12_069_029FBO Code




0Number of deaths








Value

251France - 2012



651563FBO Code




0Number of deaths








Value

252France - 2012



12_063_006FBO Code




0Number of deaths








Value

253France - 2012



12_049_006FBO Code




0Number of deaths








Value

254France - 2012



12_044_009FBO Code




0Number of deaths








Value

255France - 2012



654175FBO Code




0Number of deaths








Value

256France - 2012



12_041_005FBO Code




0Number of deaths








Value

257France - 2012



12_041_003FBO Code




0Number of deaths








Value

258France - 2012



12_036_003FBO Code




0Number of deaths








Value

259France - 2012



649949FBO Code




0Number of deaths








Value

260France - 2012



652054FBO Code




0Number of deaths








Value

261France - 2012



650595FBO Code




0Number of deaths








Value

262France - 2012



653034FBO Code




0Number of deaths








Value

263France - 2012



652202FBO Code




0Number of deaths








Value

264France - 2012



12_018_001FBO Code




0Number of deaths








Value

265France - 2012



653183FBO Code




0Number of deaths








Value

266France - 2012



653799FBO Code




0Number of deaths








Value

267France - 2012



12_010_003FBO Code




0Number of deaths








Value

268France - 2012



648935FBO Code




0Number of deaths








Value

269France - 2012


S. Enteritidis

653102FBO Code




0Number of deaths








Value

270France - 2012


S. Enteritidis

655162FBO Code




0Number of deaths








Value

271France - 2012


S. Enteritidis

12_085_006FBO Code




0Number of deaths








Value

272France - 2012


S. Enteritidis

12_083_025FBO Code




0Number of deaths








Value

273France - 2012


S. Enteritidis

653297FBO Code




0Number of deaths








Value

274France - 2012


S. Enteritidis

652825FBO Code




0Number of deaths








Value

275France - 2012


S. Enteritidis

12_079_004FBO Code




0Number of deaths








Value

276France - 2012


S. Enteritidis

12_074_015FBO Code




0Number of deaths








Value

277France - 2012


S. Enteritidis

653178FBO Code




0Number of deaths








Value

278France - 2012


S. Enteritidis

12_070_003FBO Code




0Number of deaths








Value

279France - 2012


S. Enteritidis

653957FBO Code




0Number of deaths








Value

280France - 2012


S. Enteritidis

653956FBO Code




0Number of deaths








Value

281France - 2012


S. Enteritidis

12_063_011FBO Code




0Number of deaths








Value

282France - 2012


S. Enteritidis

653172FBO Code




0Number of deaths








Value

283France - 2012


S. Enteritidis

12_052_003FBO Code




0Number of deaths








Value

284France - 2012


S. Enteritidis

12_038_012FBO Code




0Number of deaths








Value

285France - 2012


S. Enteritidis

12_030_015FBO Code




0Number of deaths








Value

286France - 2012


S. Enteritidis

12_003_004FBO Code




0Number of deaths








Value

287France - 2012


S. Enteritidis

653236FBO Code




0Number of deaths








Value

288France - 2012


S. Enteritidis

12_017_026FBO Code




0Number of deaths








Value

289France - 2012


S. Enteritidis

12_015_003FBO Code




0Number of deaths








Value

290France - 2012


S. Enteritidis

650816FBO Code




0Number of deaths








Value

291France - 2012


S. Typhimurium

12_094_006FBO Code




0Number of deaths








Value

292France - 2012


S. Typhimurium

12_074_023FBO Code




0Number of deaths








Value

293France - 2012


S. Typhimurium

653250FBO Code




0Number of deaths



UnknownOutbreak type

UnknownSetting




Value

294France - 2012


S. Typhimurium

12_070_005FBO Code




0Number of deaths








Value

295France - 2012


S. Typhimurium

12_069_016FBO Code




0Number of deaths








Value

296France - 2012


S. Typhimurium

12_065_002FBO Code




0Number of deaths








Value

297France - 2012


S. Typhimurium

653176FBO Code




0Number of deaths








Value

298France - 2012


S. Typhimurium

654181FBO Code




0Number of deaths








Value

299France - 2012


S. Typhimurium

650553FBO Code




1Number of deaths








Value

300France - 2012


S. Typhimurium

12_059_039FBO Code




0Number of deaths








Value

301France - 2012


S. Typhimurium

12_059_035FBO Code




0Number of deaths








Value

302France - 2012


S. Typhimurium

648849FBO Code




0Number of deaths








Value

303France - 2012


S. Typhimurium

654456FBO Code




0Number of deaths








Value

304France - 2012


S. Typhimurium

653814FBO Code




0Number of deaths








Value

305France - 2012


S. Typhimurium

12_043_002FBO Code




0Number of deaths








Value

306France - 2012


S. Typhimurium

12_041_009FBO Code




0Number of deaths








Value

307France - 2012


S. Typhimurium

12_037_011FBO Code




0Number of deaths








Value

308France - 2012


S. Typhimurium

654172FBO Code




0Number of deaths








Value

309France - 2012


S. Typhimurium

12_022_002FBO Code




0Number of deaths








Value

310France - 2012


S. Typhimurium

12_014_008FBO Code




0Number of deaths








Value

311France - 2012


S. Typhimurium

654169FBO Code




0Number of deaths








Value

312France - 2012


S. Typhimurium

12_013_010FBO Code




0Number of deaths








Value

313France - 2012


null

652408FBO Code




0Number of deaths








Value

Table Foodborne Outbreaks: detailed data for Staphylococcal enterotoxinsPlease use CTRL for multiple selection fields

314France - 2012


null

652578FBO Code




0Number of deaths








Value

315France - 2012


null

12_046_002FBO Code




0Number of deaths








Value

316France - 2012


null

12_044_013FBO Code




0Number of deaths








Value

317France - 2012


null

652820FBO Code




0Number of deaths








Value

318France - 2012


null

651972FBO Code




0Number of deaths








Value

319France - 2012


null

12_033_019FBO Code




0Number of deaths








Value

320France - 2012


null

651350FBO Code




0Number of deaths








Value

321France - 2012


null

653529FBO Code




0Number of deaths








Value

322France - 2012


Unknown

12_974_016FBO Code




0Number of deaths








Value

Table Foodborne Outbreaks: detailed data for Unknown agentPlease use CTRL for multiple selection fields

323France - 2012


Unknown

12_084_002FBO Code




0Number of deaths








Value

324France - 2012


Unknown

12_013_044FBO Code




0Number of deaths








Value

325France - 2012


Calicivirus - norovirus (Norwalk-like virus)

12_085_003FBO Code




0Number of deaths








Value

Table Foodborne Outbreaks: detailed data for VirusesPlease use CTRL for multiple selection fields

326France - 2012



12_065_003FBO Code




0Number of deaths








Value

327France - 2012



12_064_012FBO Code




0Number of deaths








Value

328France - 2012



650831FBO Code




0Number of deaths








Value

329France - 2012



656154FBO Code




0Number of deaths








Value

330France - 2012



650828FBO Code




0Number of deaths








Value

331France - 2012



12_040_016FBO Code




0Number of deaths








Value

332France - 2012



12_040_001FBO Code




0Number of deaths








Value

333France - 2012



12_035_003FBO Code




0Number of deaths








Value

334France - 2012



651195FBO Code




0Number of deaths








Value

335France - 2012



12_033_033FBO Code




0Number of deaths








Value

336France - 2012



656166FBO Code




0Number of deaths








Value

337France - 2012


Hepatitis virus - Hepatitis A virus

655767FBO Code




0Number of deaths








Value

338France - 2012


Hepatitis virus - Hepatitis A virus

655742FBO Code




0Number of deaths








Value

339France - 2012

france - european food safety authority

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