fruitbreedomics 1st stakeholder day meeting breeding interface
TRANSCRIPT
![Page 1: FruitBreedomics 1st Stakeholder Day meeting Breeding Interface](https://reader036.vdocument.in/reader036/viewer/2022062522/58a246ec1a28ab7b3c8b71b5/html5/thumbnails/1.jpg)
Breeder Interface
![Page 2: FruitBreedomics 1st Stakeholder Day meeting Breeding Interface](https://reader036.vdocument.in/reader036/viewer/2022062522/58a246ec1a28ab7b3c8b71b5/html5/thumbnails/2.jpg)
Need for breeder interface
• To store, retrieve and use performance data in more efficient breeding decisions
• To connect and make available in user friendly query the publicly available genomics, genetics and breeding data
![Page 3: FruitBreedomics 1st Stakeholder Day meeting Breeding Interface](https://reader036.vdocument.in/reader036/viewer/2022062522/58a246ec1a28ab7b3c8b71b5/html5/thumbnails/3.jpg)
Functions
• Data uploading– Phenotypic data– Genotipic data– QTL information
• LA, LD, PBA• Genomic selection
– Sequence information• Interfaces developed to browse, query and download the
data by variety, location, trait, marker (allele), year, pedigree– Parents selection
• Tools and automation for genetic analysis
![Page 4: FruitBreedomics 1st Stakeholder Day meeting Breeding Interface](https://reader036.vdocument.in/reader036/viewer/2022062522/58a246ec1a28ab7b3c8b71b5/html5/thumbnails/4.jpg)
Breeder Toolbox @ GDR
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Breeder Toolbox @ GDR
![Page 6: FruitBreedomics 1st Stakeholder Day meeting Breeding Interface](https://reader036.vdocument.in/reader036/viewer/2022062522/58a246ec1a28ab7b3c8b71b5/html5/thumbnails/6.jpg)
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Fruitbreedomics
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Fruitbreedomics
• GDR BT allows for phenotype or quantitative selection• Development of a new marker–trait module– Markers attributes
• Relative effect on each trait – allele attributes• Genomic attributes on a gbrowser: position e info on the region
(ld, genes, ..)– Accounting for multiple markers per trait
• Weighting system for markers by trait• Genomic selection
– Multi-stage selection