gene-mutation hypothesis of cancer

5
Proc. Nati. Acad. Sci. USA Vol. 89, pp. 6393-6397, July 1992 Biochemistry Unmutated proto-src coding region is tumorigenic if expressed from the promoter of Rous sarcoma virus: Implications for the gene-mutation hypothesis of cancer (retroviral oncogenicity from transcriptional activation/mutated genes and cancer) YUE WU*, HONG ZHOUt, AND PETER DUESBERG*t *Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720; and tLaboratory of Molecular Oncology, National Cancer Institute-Frederick Cancer Research Facility, Building 469, Room 203, Frederick, MD 21701 Contributed by Peter Duesberg, March 25, 1992 ABSTRACT The transforming (onc) genes of oncogenic retroviruses share most or all of their coding sequences with normal cellular genes termed proto-onc genes. The viral genes differ from proto-onc genes in virus-specific promoters and in various point mutations and substitutions of cell-derived coding regions. In view of the structural similarities between viral oncogenes and cellular proto-onc genes, the hypothesis has been advanced that proto-onc genes become cellular cancer genes if they have suffered mutations. Indeed, point mutations and substitutions have been observed in the proto-onc genes of some cancers. However, the hypothesis has been difficult to prove because mutated proto-onc genes from tumors do not transform diploid cells. Moreover, owing to the popularity of this hypothesis, even viral oncogenes are thought to derive transforming function from mutations of this cell-derived coding region. A competing hypothesis proposes that enhanced expression from retroviral promoters is necessary and suffi- cient for oncogenic function of proto-onc genes. To distinguish between these hypotheses we have tested tumorigenicity of RpSV, a synthetic retrovirus with the normal proto-src coding region in a vector derived from Rous sarcoma virus (RSV). In addition, we have tested the role of RSV-specific src point mutations on the tumorigenicity of RpSV. It was found that RpSV with an unmutated proto-src coding region is tumori- genic in chickens and that tumorigenicity is enhanced by RSV-specific src point mutations. It is concluded that retroviral promoters are essential for the transforming function of viral oncogenes and that certain point mutations merely supplement their transforming function. Thus retroviral one genes are not models for the hypothesis that mutated, but transcriptionally normal, proto-onc genes of certain tumors are cancer genes. Most or all of the coding regions of retroviral transforming (onc) genes are derived from cellular genes termed proto-onc genes (1). The viral genes differ from proto-onc genes in virus-specific promoters and various point mutations, dele- tions, and substitutions of their coding sequences (2). For example, the transforming src gene of Rous sarcoma virus (RSV) and of three other strains of avian sarcoma viruses differs from the proto-src gene of normal cells in (i) virus- specific promoters, (ii) a virus-specific carboxyl terminus that replaces the six carboxyl-terminal amino acids, including Tyr codon 527, of proto-src by heterologous virus- or cell- derived sequences, and (iii) scattered, virus strain-specific point mutations within the 514 codons that viral src and proto-src have in common (1, 3). In view of the structural similarities between retroviral oncogenes and cellular proto-onc genes, the hypothesis has been advanced that proto-onc genes become cellular cancer genes if they have suffered mutations (1, 4-9). Indeed, mutated proto-onc genes have been found in some tumors. However, the hypothesis has been difficult to prove, because mutated proto-onc genes from tumors do not transform diploid cells upon transfection (10) or introduction into the germ line of transgenic animals (11). An apparent exception is the evidence that point-mutated proto-ras genes from certain cancers would transform the aneuploid 3T3 mouse cell line (5, 6). By contrast, retroviral oncogenes are inevitably oncogenic in diploid cells or animals (1, 2). Due to the popularity of the proto-onc gene-mutation hypothesis, even the transforming function of viral onc genes is thought to derive from muta- tions that set apart the coding regions of viral onc genes from corresponding proto-onc genes (8, 9, 12, 13). For example, the transforming function of viral src genes (13-15) and viral ras genes (1, 7, 12) has been interpreted as the result of point mutations that set apart the proteins encoded by the viral and corresponding cellular genes. However, transforming function of typical retroviral onc genes, including src, myc, and ras genes, was recently shown to depend on retroviral promoters rather than on the muta- tions that set apart the coding regions of viral and proto-onc genes (3, 16-21). These promoters increase expression about 100-fold compared to the corresponding proto-onc genes (11, 21, 22). In addition, transformation of 3T3 cells by point- mutated proto-ras genes from tumors was recently shown to reflect expression artifacts generated by the transfection assay, rather than a genuine function of native, point-mutated proto-ras genes from tumors. These artifacts include substi- tution of native cellular proto-ras control elements and of the native proto-ras promoter by heterologous counterparts and concatenization of proto-ras genes during transfection (11, 21). In view of this, we and others have advanced the hypoth- esis that transforming function of retroviral onc genes is due to the 100-fold transcriptional activation of proto-onc-derived coding sequences by retroviral promoters (2, 11, 18, 20, 21). Certain virus-specific or cellular mutations in the coding sequence merely enhance this transforming function derived from heterologous promoters but would not be able to create it on their own. To put our hypothesis to a further test, we ask here whether the native proto-src coding region artificially introduced into a retrovirus vector would be tumorigenic in animals and whether virus-specific point mutations would enhance the transforming function of such a virus. Previously, we had found that RpSV, a synthetic virus with a native proto-src coding region (see Fig. 1), is sufficient to transform primary Abbreviations: RSV, Rous sarcoma virus; RpSV, proto-onc sarcoma virus. tTo whom reprint requests should be addressed. 6393 The publication costs of this article were defrayed in part by page charge payment. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. §1734 solely to indicate this fact.

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Page 1: gene-mutation hypothesis of cancer

Proc. Nati. Acad. Sci. USAVol. 89, pp. 6393-6397, July 1992Biochemistry

Unmutated proto-src coding region is tumorigenic if expressed fromthe promoter of Rous sarcoma virus: Implications for thegene-mutation hypothesis of cancer

(retroviral oncogenicity from transcriptional activation/mutated genes and cancer)

YUE WU*, HONG ZHOUt, AND PETER DUESBERG*t*Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720; and tLaboratory of Molecular Oncology, National CancerInstitute-Frederick Cancer Research Facility, Building 469, Room 203, Frederick, MD 21701

Contributed by Peter Duesberg, March 25, 1992

ABSTRACT The transforming (onc) genes of oncogenicretroviruses share most or all of their coding sequences withnormal cellular genes termed proto-onc genes. The viral genesdiffer from proto-onc genes in virus-specific promoters and invarious point mutations and substitutions ofcell-derived codingregions. In view of the structural similarities between viraloncogenes and cellular proto-onc genes, the hypothesis hasbeen advanced that proto-onc genes become cellular cancergenes if they have suffered mutations. Indeed, point mutationsand substitutions have been observed in the proto-onc genes ofsome cancers. However, the hypothesis has been difficult toprove because mutated proto-onc genes from tumors do nottransform diploid cells. Moreover, owing to the popularity ofthis hypothesis, even viral oncogenes are thought to derivetransforming function from mutations of this cell-derivedcoding region. A competing hypothesis proposes that enhancedexpression from retroviral promoters is necessary and suffi-cient for oncogenic function of proto-onc genes. To distinguishbetween these hypotheses we have tested tumorigenicity ofRpSV, a synthetic retrovirus with the normal proto-src codingregion in a vector derived from Rous sarcoma virus (RSV). Inaddition, we have tested the role of RSV-specific src pointmutations on the tumorigenicity of RpSV. It was found thatRpSV with an unmutated proto-src coding region is tumori-genic in chickens and that tumorigenicity is enhanced byRSV-specific src point mutations. It is concluded that retroviralpromoters are essential for the transforming function of viraloncogenes and that certain point mutations merely supplementtheir transforming function. Thus retroviral one genes are notmodels for the hypothesis that mutated, but transcriptionallynormal, proto-onc genes of certain tumors are cancer genes.

Most or all of the coding regions of retroviral transforming(onc) genes are derived from cellular genes termed proto-oncgenes (1). The viral genes differ from proto-onc genes invirus-specific promoters and various point mutations, dele-tions, and substitutions of their coding sequences (2). Forexample, the transforming src gene of Rous sarcoma virus(RSV) and of three other strains of avian sarcoma virusesdiffers from the proto-src gene of normal cells in (i) virus-specific promoters, (ii) a virus-specific carboxyl terminusthat replaces the six carboxyl-terminal amino acids, includingTyr codon 527, of proto-src by heterologous virus- or cell-derived sequences, and (iii) scattered, virus strain-specificpoint mutations within the 514 codons that viral src andproto-src have in common (1, 3).

In view of the structural similarities between retroviraloncogenes and cellular proto-onc genes, the hypothesis hasbeen advanced that proto-onc genes become cellular cancer

genes if they have suffered mutations (1, 4-9). Indeed,mutated proto-onc genes have been found in some tumors.However, the hypothesis has been difficult to prove, becausemutated proto-onc genes from tumors do not transformdiploid cells upon transfection (10) or introduction into thegerm line of transgenic animals (11). An apparent exceptionis the evidence that point-mutated proto-ras genes fromcertain cancers would transform the aneuploid 3T3 mousecell line (5, 6).By contrast, retroviral oncogenes are inevitably oncogenic

in diploid cells or animals (1, 2). Due to the popularity of theproto-onc gene-mutation hypothesis, even the transformingfunction of viral onc genes is thought to derive from muta-tions that set apart the coding regions of viral onc genes fromcorresponding proto-onc genes (8, 9, 12, 13). For example,the transforming function of viral src genes (13-15) and viralras genes (1, 7, 12) has been interpreted as the result of pointmutations that set apart the proteins encoded by the viral andcorresponding cellular genes.However, transforming function of typical retroviral onc

genes, including src, myc, and ras genes, was recently shownto depend on retroviral promoters rather than on the muta-tions that set apart the coding regions of viral and proto-oncgenes (3, 16-21). These promoters increase expression about100-fold compared to the corresponding proto-onc genes (11,21, 22). In addition, transformation of 3T3 cells by point-mutated proto-ras genes from tumors was recently shown toreflect expression artifacts generated by the transfectionassay, rather than a genuine function ofnative, point-mutatedproto-ras genes from tumors. These artifacts include substi-tution of native cellular proto-ras control elements and of thenative proto-ras promoter by heterologous counterparts andconcatenization of proto-ras genes during transfection (11,21).

In view of this, we and others have advanced the hypoth-esis that transforming function of retroviral onc genes is dueto the 100-fold transcriptional activation ofproto-onc-derivedcoding sequences by retroviral promoters (2, 11, 18, 20, 21).Certain virus-specific or cellular mutations in the codingsequence merely enhance this transforming function derivedfrom heterologous promoters but would not be able to createit on their own.To put our hypothesis to a further test, we ask here whether

the native proto-src coding region artificially introduced intoa retrovirus vector would be tumorigenic in animals andwhether virus-specific point mutations would enhance thetransforming function of such a virus. Previously, we hadfound that RpSV, a synthetic virus with a native proto-srccoding region (see Fig. 1), is sufficient to transform primary

Abbreviations: RSV, Rous sarcoma virus; RpSV, proto-onc sarcomavirus.tTo whom reprint requests should be addressed.

6393

The publication costs of this article were defrayed in part by page chargepayment. This article must therefore be hereby marked "advertisement"in accordance with 18 U.S.C. §1734 solely to indicate this fact.

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Proc. Natl. Acad. Sci. USA 89 (1992)

avian fibroblasts in vitro but is slower than RSV, requiring9-12 days compared to 4-5 days, in cell transformation (3).Here we show that RpSV is tumorigenic in chickens after12-15 days, compared to 4-5 days for RSV, and that tumor-igenicity is enhanced by point mutation. Further, we haveproved that RpSV tumorigenicity is due to the input virusrather than to spontaneous mutation of the virus in theanimal.

MATERIALS AND METHODSConstruction of Recombinant Viruses. RpSV has been

constructed from a DNA provirus of RSV, pJD100 (23), bysubstituting the coding region of src from an Nco I site at theAUG start codon to a Pvu II site 36 base pairs (bp) upstreamof the TAA stop codon by a sequence that includes thecomplete coding region of proto-src (Fig. 1). The proto-srcDNA extended from the Nco I site at AUG to a Sac I site 10bases downstream of the TAG stop codon of proto-src (3).The resulting recombinant virus contains the complete cod-ing region ofproto-src (Fig. 1). RpSV with a RSV-derived srcmutation in src codon 95, termed RpSV 95, was constructedby replacing a 2906-bp Kpn I/Mlu I fragment of RpSV thatincludes the Arg codon 95 of proto-src (Fig. 1) with thecorresponding fragment from RSV that encodes Trp in codon95 (1). For this purpose, RpSV was digested with Kpn I andMlu I and the resulting 9266-bp fragment was ligated with theKpn I/Mlu I fragment from the RSV clone pJD100 (3). RpSV338, with a RSV-specific point mutation in src codon 338, wasderived from pJD100 in two steps: First, a RSV-specific MstII site 5' of Mlu I was eliminated by replacing the 2906-bpKpn-Mlu sequence by a 765-bp counterpart from A phage.Next the 249-bp Mst 11-bordered viral src carboxyl terminuswas replaced by the 312-bp equivalent of RpSV (Fig. 1).Subsequently, the A phage-derived Kpn-Mlu sequence wasreplaced by the original 2906-bp Kpn-Mlu sequence ofRpSV. RpSV 95-338 with RSV-specific src codons 95 and338 was made from the immediate precursor construct ofRpSV 338 by replacing the A-derived Kpn-Mlu sequencewith the original 2906-bp sequence of RSV.

RpSV

r,

ATG 95

Reverse Transcription of Virus RNA to cDNA in Vitro.About 0.2 A260 unit (measured in 0.1% SDS) of purified viruswere incubated at 40°C for 24 hr in a solution containing thefour dNTPs each at 10 ,uM, 50 mM NaCI, 10 mM Tris HCl atpH 7.9, 10 mM MgCI2, 1 mM dithiothreitol, 2.5 ,ug ofoligo(dT) per ml, and 0.25% Nonidet P-40 as described (24).The cDNA was isolated from the reaction mixture by phenolextraction and ethanol precipitation. In some experimentsthe viral RNA was eliminated from the cDNA by treatmentfor 4 hr at 40°C in 0.3 M NaOH.

Specific Amplification of cDNA by the Polymerase ChainReaction (PCR). The cDNA from about 0.04 A260 unit ofpurified RpSV or RSV virus was incubated in 100 Al of 100,uM each of the four dNTPs, 10 mM Tris HCl at pH 8.3, 50mM KCl, 1.5 mM MgCl2, 0.001% gelatin, and 1.0 ,uM each oftwo specific primers as recommended by the manufacturer(Perkin-Elmer/Cetus). One of the primers was a 25-mer ofthe src sequence of RSV from position 8598 to position 8622just 5' ofa Mst II site at position 8635; the other was a 27-mercomplementary to a sequence ofRSV 3' of src from position8899 to position 8925 (Fig. 1) (1). After 2 min at 94°C, 2.5 unitsof TaqDNA polymerase was added. The solution was carriedthrough 45 cycles ofdenaturation for 1 min at 94°C, annealingfor 1 min during a temperature shift from 94°C to 550C and by2 min at 550C, followed by polymerization for 3 min at 72°C.Finally, the mixture was incubated at 72°C for 10 min tocomplete any incomplete DNA products (25, 26). The PCRproducts were analyzed by electrophoresis in 1.7% agarose in40 mM Tris-acetate/1 mM EDTA containing 0.5 Ag ofethidium bromide per ml (25).

RESULTSTransformation of Cells in Culture by Synthetic Viruses

Carrying Proto-src Coding Regions with RSV-Speciflc PointMutations. To determine whether RSV-specific src pointmutations other than those affecting the carboxyl terminus ofproto-src-e.g., the RSV-specific src codons 95 and 338-play a role in transforming function, such mutations wereintroduced singly or together into the proto-src coding region

338 TAG

l.z. . -.-I

K

5 primer

M Ps

MII

m SpP

TAG TAA

Li

S.P rN.A

395 bp

FIG. 1. Genetic structure ofthe recombinant proto-src gene ofRpSV. ATG and TAG mark the proto-src coding region (high box), the arrowsmark the proviral long terminal repeats including the viral promoters, and the lower white boxes are noncoding regions (3). The positions ofsrc codons 95 and 338 and of several restriction enzyme sites are indicated. Restriction enzyme sites are abbreviated as follows: K, Kpn I; M,Mst II; Ml, Mlu I; P, Pvu II; Ps, Pst I; S, Sac I. The lower panel shows the 3' terminal proto-src region that was amplified for size and sequenceanalysis (see text).

6394 Biochemistry: Wu et al.

'N'.

r' '.1 I

.., , e-

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Proc. Natl. Acad. Sci. USA 89 (1992) 6395

of RpSV. For this purpose, the amino-terminal domain of theproto-src coding region of RpSV, including codon 95, and aninternal domain, including codon 338, were exchanged for theRSV equivalents (Fig. 1) (Materials and Methods). Theresulting proviruses, termed RpSV 95, RpSV 338, and RpSV95-338, were transfected onto quail embryo fibroblasts asdescribed (3). In parallel, quail cells were transfected withproviruses of RpSV and RSV. RSV began to transform cellson day 4. Foci of RpSV-transformed cells were observed onday 6 for RpSV 95-338, on day 7 for RpSV 95, on day 8 forRpSV 338, and on day 9 for RpSV. Cells transformed by thethree recombinant RpSVs were all more refractile than thosetransformed by RpSV. Within 2 weeks most cells of culturestransfected by RpSV 95, RpSV 338, and RpSV 95-338 weretransformed. By contrast, only about halfthe cells in culturestransfected by the provirus of RpSV were transformed,confirming previous observations (3). It is concluded thatsome RSV-specific src point mutations enhance transformingfunction of RpSV in vitro.

Tumorigenicity of RpSV, RpSV 95, RpSV 338, and RpSV95-338 in Newborn Chickens. Next the tumorigenicity ofRpSV and of the RpSV mutants 95, 338, and 95-338 wastested in newborn chickens. For this purpose the viruseswere purified by sucrose gradient ultracentrifugation fromthe growth media of cultures of transformed quail cells (27).The media were collected at daily intervals (28). One-day-oldchickens were injected under the wing web with 50-150 u4 ofpurified virus in physiological saline buffer, derived from10-20 ml of culture medium. Sarcomas were detected on day7 after injecting RpSV 85-338, on day 9 after injecting RpSV85 and RpSV 338, and on days 12-15 after injecting RpSV(Fig. 2). Sarcomas were observed on day 4 after injectingRSV. Thus, incubation periods from inoculation of RpSVmutants to tumorigenicity varied with distinct proto-src mu-tations, and all proto-src viruses were slower in causingtumors than RSV. Since all tumors caused by syntheticviruses carrying proto-src coding regions had appeared laterthan those caused by wild-type RSV, it may be argued thatthe longer incubation periods to tumorigenicity reflected timerequired to generate oncogenic mutants.

Sequence Analyses of RpSVs from Viral Tumors. To deter-mine whether tumorgenicity ofproto-src viruses was genuineor due to mutations of proto-src, the proto-src sequences ofRpSVs recovered from tumors were analyzed. Because mu-tation of the proto-src-specific carboxyl terminus is the most

effective enhancer of transforming function of a proto-srccoding region under a retroviral promoter (3, 13), we inves-tigated whether the sequence of this region had been mutatedin viruses recovered from tumors.

Viruses were recovered from the sarcomas of six chickensinoculated with RpSV. The sarcomas were washed with 75%ethanol, excised, and dissected with scalpels. The mincedtissue was washed three to five times by vigorous stirringwith 10 vol of buffered saline at 0-4°C to eliminate bloodcells. Subsequently, the tissue was stirred with trypsin at36°C and single cells were decanted about three times at20-min intervals and propagated in 10-cm Petri dishes asdescribed (3). The growth media were then collected for 1-2weeks and the viruses were purified by sucrose gradientultracentrifugation (3). The viral RNAs were then transcribedin vitro to cDNA by viral reverse transcriptase (Materialsand Methods). A nucleotide sequence of the cDNA from sixRpSVs recovered from sarcomas from a position correspond-ing to nucleotide 8598 in the src gene ofRSV to position 8925,which is located downstream of the src coding region ofRSV(1), was then amplified by the PCR with specific primers andanalyzed for its size and sequence (Materials and Methods).In parallel, the cDNA of wild-type RSV and the cloned DNAof RpSV were amplified with the same primers.The sequence between our primers is expected to measure

395 nucleotides for intact, unmutated RpSV and 328 nucle-otides forRSV (Fig. 1). As can be seen in Fig. 3, all RpSV srcDNAs had the same, expected size of about 395 nucleotidesas the RpSV control, indicating that their proto-src carboxyltermini were not mutated with regard to their size. The RSV3' terminal src sequence also had the predicted size (Fig. 3).Next we asked whether the 3' terminal proto-src coding

region, particularly the carboxyl-terminal Tyr codon 527 (13),had been mutated in any of the tumorigenic RpSVs. For thispurpose most of the sequences amplified by the above

1 2 3 4 5 6 7 8 9

-1353-1078

-872

-603

-310-281

395-328-

FIG. 2. Sarcoma induced by injecting RpSV into a 1-day-oldchicken. The supernatant medium from cultured quail cells trans-formed by RpSV was collected and virus particles were purified bysucrose gradient ultracentrifugation. About 50-150 ,ul of purifiedvirus was injected into the wing web of a 1-day-old chicken. Thesarcoma shown above became detectable 12 days after injection andwas photographed 3 weeks after the injection.

FIG. 3. The 3' terminal proto-src coding regions of RpSVsrecovered from six viral tumors. Viruses from sarcomas of chickensinjected with RpSV were purified by sucrose gradient ultracentrif-ugation. An in vitro reverse transcriptase reaction was carried out tomake cDNA. Two primers flanking the 3' terminal proto-src se-quence of RpSVs were used to amplify the sequence in PCRreactions (see text and Fig. 2). The DNA products were analyzed byelectrophoresis in a 1.7% agarose gel containing 0.5 Jtg of ethidiumbromide per ml. Lanes 1-6, cDNAs from RpSVs recovered from sixseparate chicken sarcomas; lane 7, cDNA from RSV amplified withthe same primers as for RpSV (see text); lane 8, DNA from theplasmid containing the provirus of RpSV amplified as above; lane 9,DNA size markers (in nucleotides) of phage 4'x174 replicative formDNA digested with Hae III.

Biochemistry: Wu et al.

Nk

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Proc. Natl. Acad. Sci. USA 89 (1992)

primers-e.g., 292 nucleotides from a Pst I site at position8662 to aMst II site at position 8884 (see Fig. 1)-were clonedinto the polylinker of a pUC plasmid (Pharmacia pSL1180)and analyzed. As can be seen in Fig. 4, the 3' terminalsequences of three RpSVs from three different tumors wereunchanged in their coding regions, each carrying the nativeTyr in codons 527. It is concluded that the unmutatedproto-src coding region of the cell is tumorigenic in a RSV-derived retrovirus vector.

DISCUSSIONRetroviral Promoter Sufficient to Convert Proto-src Genes to

Cancer Genes. Our experiments have demonstrated thatenhanced expression of the normal proto-src coding regionfrom a RSV-derived retroviral promoter is sufficient fortumorigenicity. Further, we have demonstrated that tumor-igenicity of the retrovirus-promoted proto-src protein isenhanced by RSV-specific src point mutations other than thatthat alters Tyr codon 527. These experiments confirm andextend studies with other proto-onc genes, which have dem-onstrated that about 100-fold increased expression fromretrovirus promoters is sufficient for transforming function ofdiploid cells and tumorigenicity. Examples include retrovi-rus-promoted coding regions of proto-ras (3, 16, 18, 20, 21)and proto-myc (17, 19, 29). Thus, our experiments supportthe hypothesis that retroviral onc genes derive transformingfunction from strong viral promoters rather than from muta-tions that affect the coding sequence of native proto-oncgenes (2, 11). Such mutations may merely enhance thetransforming function derived from retroviral promoters.

Retrovirus Model Casts Doubts on the Somatic Gene-Mutation Hypothesis of Cancer. Retroviral onc genes provideas yet the only proven examples that mutated cellular genescan cause cancer. Therefore they are considered the mostcritical support for the hypothesis that mutation of cellulargenes causes cancer (8, 30-32). The hypothesis that mutatedcellular genes cause cancer is based on two kinds of circum-stantial evidence: (i) many carcinogens are mutagens inanimals (30) or bacteria (33, 34) and (ii) the coding regions ofthe proto-onc genes of some cancers sometimes have muta-tions that are similar to those of the coding regions of relatedretroviral onc genes (1, 4-9, 35-37). However, our resultscast doubt on the hypothesis that mutations that do notenhance transcription like retroviral promoters can "acti-vate" proto-onc genes to cancer genes for several reasons.

(i) Since retroviral onc genes derive transforming functionfrom strong retroviral promoters rather than from mutations

L2: c .....................L4: .......... .......... .......... ..........

L6:....a

in the coding region, there are no precedents or models forhow mutations that do not enhance transcription wouldconvert proto-onc genes to cancer genes. Indeed, none ofthemutated proto-onc genes observed in cancer cells is tran-scriptionally activated like retroviral onc genes (11).

(ii) The probability of the mutations that are postulated toconvert proto-onc genes to cancer genes, such as pointmutations and truncations, is much higher than the incidenceof cancer. For example, the probability of a point mutationper nucleotide per mitosis is about 1 in 109 (2, 11, 30, 34).Given this point mutation rate and 109 nucleotides per humanDNA (38), a cell with any possible point mutation of thehuman genome would be found in 109 cells. Since the humanbody consists ofmore than 1014 cells (2, 30), this correspondsto a minimum of over 100,000 hypothetical cancer cells(1014:109 = 105) per human body at any given time. Consid-ering that many proto-onc genes are said to be activated bypoint mutation and some like proto-ras even by >50 differentpoint mutations (7, 16, 39), the number of cancer cells perhuman body would be correspondingly higher.

It is possible, however, to reconcile numerically the highprobability of such mutations with the low probability ofcancer by assuming cooperations of multiple mutated proto-onc genes and anti-oncogenes in the same cell. This has beendone in the case of colon cancer (10, 35, 40) and some othertumors (10, 11, 36). However, these ad hoc assumptionscreate new unresolved problems. They assume that mutatedproto-onc genes, as, for example, point-mutated proto-ras incolon cancer, cause cancer by second- and higher-ordermechanisms of carcinogenesis, although all known retroviralonc genes, including the retroviral ras genes, are first-ordercarcinogens that are sufficient for carcinogenesis (2, 11).

(iii) Nothing would be evolutionarily more implausible fora multicellular organism than a battery of cellular oncogenesthat can each be activated to cancer genes by point mutationsand other mutations, because just a single cancer cell issufficient to initiate a clonal cancer (2, 30). Moreover, itwould be unlikely that such common mutations as pointmutations and substitutions could activate genes that havebeen optimized over billions of years of evolution. On thecontrary, mutations are typically silent or inactivating (11, 41,42).

(iv) There is no functional proof for cellular cancer genes.(a) Mutated or "activated" proto-onc genes from tumors donot transform normal diploid cells upon transfection or intransgenic animals (10, 11). According to Stanbridge (10),". . . despite intensive efforts to transform normal humanfibroblasts or epithelial cells with varying combinations of

RpSV:ctgcaggcct tcctggagga ctacttcacc tcgacagagc cccagTACca gcctggagag aacctaTAGg cctggctgct

L2: .......... .......... .......a ...................... ..........

L4: .......... .......... .......a ...................... ..........

L6: .................... .......a .. .......... .......... ........ .

RpSV:ccctgcttgt gtgttggagg tcgctgagta agtacgaggc gtgacctaca attgctcaaa

L2:.................... .......... .......... .......... ..........

L4: .......... .......... .......... .......... .......... ..........

L6: .......... .......... .......... .......... .......... ..........

RpSV:tttagcatta ggcgtcctgc gttgctccgc gatgtacggg tcaggtataa tgtgcagttt

*atc-c.... ..........

taatgcttct gtagaaattg

g*ctgag-gg ..........

.......... ..........

ga~ctgagggg accatgatgt

L2: .......... .......... .......... .......... .......... ..

L4 : . . . . . . . . . . . . . . . . . . . .. . . . . . . . . . . .. . . . . .. . . . .. . . . . . . ........... .......... ......

L 6 : . . . . . . . . . . . . . . . .. . . . .. . . . . . . . . . . .. . . . . .. . . ... . . . . . . ........... .......... ......

RpSV:gtataggcgt caagcggggc ttcggttgta cgcggatagg aatcccctca gg

FIG. 4. The 3' terminal proto-src sequences of three RpSVs recovered from chicken sarcomas. The sequences of the RpSV DNAs L2, LA,and L6 correspond to the DNAs shown in lanes 2, 4, and 6 in Fig. 3. The sequence from the original RpSV is included for comparison (1). Dotsindicate identity. The Tyr codon 527 (TAC) and the stop codon (TAG) of proto-src are capitalized and highlighted. The sequences weredetermined by Lark Sequencing Technologies (Houston).

63% Biochemistry: Wu et al.

.......... .......... .......... ..........

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Proc. Natl. Acad. Sci. USA 89 (1992) 6397

activated cellular oncogenes, the results have been uniformlynegative." Even combinations of mutated proto-onc geneshave failed to transform cells unless linked to viral promoters(11, 21). By contrast, proviral DNA from oncogenic retrovi-ruses transforms diploid cells like retroviruses (1, 11). (b)Mutated proto-onc genes of tumors do not determine thecharacter of a given type of tumor compared to one withoutsuch a gene (11, 35, 43). By contrast, retroviral oncogenesdetermine many characters of the resulting tumors (1, 44).

It appears that the somatic gene-mutation hypothesis ofcancer is numerically and evolutionarily implausible andfunctionally unconfirmed. Similar conclusions were reachedby Rous (45, 46) and Rubin (47) after studying oncogenicviruses and cancer for over 50 and 30 years, respectively.Rous concluded, "A favorite explanation has been thatoncogens [Rous' term for carcinogens] cause alterations inthe genes of the ordinary cells of the body . . . somaticmutations as these are termed. But numerous facts, whentaken together, decisively exclude this supposition" (46) and,"A hypothesis is best known by its fruits. What have beenthose of the somatic mutation hypothesis? . . . It acts as atranquilizer on those who believe in it, and this at a time whenevery worker should feel goaded now and again by hisignorance ofwhat cancer is" (45). Likewise, Cairns (48) " .

suggests that most human cancers are not caused by con-ventional mutagens...."

It is conceivable, therefore, that the gene-mutation hy-pothesis of cancer is limited to the genesis of retroviral oncgenes from the coding regions of cellular proto-onc genes andretroviral promoters. Indeed, retroviruses have evolveddominant promoters to override cellular controls and thushave the real potential to activate genes by promoter substi-tution via rare illegitimate recombination (2). There is how-ever no evidence for cellular promoters that could activateheterologous cellular genes to retrovirus-like transforminggenes. An alternative hypothesis suggests that nonviral can-cers are not caused by mutation of singular genes but are theproduct of gross genetic imbalances of normal genes due tochromosome abnormalities (11), as originally proposed in1914 by Boveri (49).

We thank Harry Rubin for a critical review ofthe manuscript. Thisresearch is supported by Outstanding Investigator Grant 5-R35-CA39915-07 from the National Cancer Institute.

1. Weiss, R., Teich, N., Varmus, H. & Coffin, J. (1985) MolecularBiology ofRNA Tumor Viruses (Cold Spring Harbor Lab., ColdSpring Harbor, NY).

2. Duesberg, P. H. (1987) Proc. Natl. Acad. Sci. USA 84, 2117-2124.

3. Zhou, H. & Duesberg, P. H. (1990) Proc. Natl. Acad. Sci. USA87, 9128-9132.

4. Bishop, J. M. (1981) Cell 23, 5-6.5. Tabin, C. J., Bradley, S. M., Bargmann, C. I., Weinberg,

R. A., Papageorge, A. G., Scolnick, E. M., Dhar, R., Lowy,D. R. & Chang, E. H. (1982) Nature (London) 300, 143-149.

6. Reddy, E. P., Reynolds, R. K., Santos, E. & Barbacid, M.(1982) Nature (London) 300, 149-152.

7. Varmus, H. E. (1984) Annu. Rev. Genet. 18, 533-612.8. Bishop, J. M. (1987) Science 235, 305-311.9. Cooper, G. M. (1990) Oncogenes (Jones & Bartlett, Boston).

10. Stanbridge, E. J. (1990) Annu. Rev. Genet. 24, 615-657.

11. Duesberg, P. H. & Schwartz, J. R. (1992) Prog. Nucleic AcidRes. Mol. Biol. 43, 135-204.

12. Tabin, C. J. & Weinberg, R. A. (1985) J. Virol. 53, 260-265.13. Hunter, T. (1987) Cell 49, 1-4.14. Parker, R. C., Varmus, H. F. & Bishop, J. M. (1984) Cell 37,

131-139.15. Iba, H., Takeya, T., Cross, F. R., Hanafusa, T. & Hanafusa,

H. (1984) Proc. Natl. Acad. Sci. USA 81, 4424-4428.16. Cichutek, K. & Duesberg, P. H. (1986) Proc. Natl. Acad. Sci.

USA 83, 2340-2344.17. Zhou, R.-P. & Duesberg, P. H. (1988) Proc. Nail. Acad. Sci.

USA 85, 2924-2928.18. Cichutek, K. & Duesberg, P. H. (1989) J. Virol. 63, 1377-1383.19. Zhou, R.-P. & Duesberg, P. H. (1989) Proc. Natl. Acad. Sci.

USA 86, 7721-7725.20. Velu, T. J., Vass, W. C., Lowy, D. R. & Tambourin, P. E.

(1989) J. Virol. 63, 1384-1392.21. Chakraborty, A. K., Cichutek, K. & Duesberg, P. H. (1991)

Proc. Natl. Acad. Sci. USA 88, 2217-2221.22. Bishop, J. M. (1982) Adv. Cancer Res. 37, 1-32.23. Wilkerson, V. W., Bryant, D. L. & Parsons, J. T. (1985) J.

Virol. 55, 314-321.24. Goodrich, D. W. & Duesberg, P. H. (1990) Proc. Natl. Acad.

Sci. USA 87, 2052-2056.25. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. E.,

Seidman, J. G., Smith, J. A. & Struhl, K. (1988) CurrentProtocols in Molecular Biology (Wiley, New York).

26. Saiki, R. K., Gelfand, D. H., Stoffel, S., Scharf, S. J., Higuchi,R., Horn, G. T., Mullis, K. B. & Erlich, H. A. (1988) Science239, 487-491.

27. Duesberg, P. H. (1968) Proc. Natl. Acad. Sci. USA 60, 1511-1518.

28. Canaani, E., von der Helm, K. & Duesberg, P. H. (1973) Proc.Natl. Acad. Sci. USA 70, 401-405.

29. Pfaff, S. L., Zhou, R.-P., Young, J. C., Hayflick, J. & Dues-berg, P. H. (1985) Virology 146, 6389-6393.

30. Cairns, J. (1978) Cancer Science and Society (Freeman, SanFrancisco).

31. Pitot, H. C. (1986) Fundamentals of Oncology (Dekker, NewYork).

32. Temin, H. M. (1988) Cancer Res. 48, 1697-1701.33. Ames, B. N. (1979) Science 204, 587-593.34. Strauss, B. S. (1992) Cancer Res. 52. 249-253.35. Vogelstein, B., Fearon, E. R., Stanley, B. A., Hamilton, R.,

Kern, S. E., Preisinger, A. C., Leppert, M., Nakamura, Y.,White, R., Smits, A. M. M. & Bos, J. L. (1988) N. Engl. J.Med. 319, 525-532.

36. Weinberg, R. A. (1991) Science 254, 1138-1146.37. Bishop, J. M. (1991) Cell 64, 235-248.38. Lewin, B. (1990) Genes IV (Oxford Univ. Press, Oxford).39. Seeburg, P. H., Colby, W. W., Capon, P. J., Goeddel, D. V. &

Levinson, A. D. (1984) Nature (London) 312, 71-75.40. Stanbridge, E. (1990) Science 247, 12-13.41. Watson, J. D. (1970) Molecular Biology ofthe Gene (Benjamin,

New York).42. Puck, T. (1972) The Mammalian Cell as a Microorganism

(Holden-Day, San Francisco).43. Barbacid, M. (1987) Annu. Rev. Biochem. 56, 779-827.44. Lee, W.-H., Bister, K., Pawson, A., Robins, T., Moscovici, C.

& Duesberg, P. H. (1980) Proc. Natl. Acad. Sci. USA 77,2018-2022.

45. Rous, P. (1959) Nature (London) 183, 1357-1361.46. Rous, P. (1967) Science 157, 24-28.47. Rubin, H. (1980) J. Natl. Cancer Inst. 64, 995-1000.48. Cairns, J. (1981) Nature (London) 289, 353-357.49. Boveri, T. (1914) Zur Frage der Enstehung maligner Tumoren

(Gustav Fischer, Jena, Germany).

Biochemistry: Wu et al.