genomics in education: gene annotation and comparison an eot discovery environment dave micklos, uwe...

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Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring Harbor Laboratory

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Page 1: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Genomics in Education: Gene Annotation and Comparison

An EOT Discovery Environment

Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong

Cold Spring Harbor Laboratory

Page 2: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Arizona State University Scott Menor

Cold Spring Harbor Laboratory Sheldon McKay, Martin Paradesi, Zhenyu Xuan, Zenyuan Lu

Howard Hughes Medical Institute Kevin Bradley, Matt Conte

Joint Genome Institute David Gilbert, Igor Gregoriev

Lawrence Berkeley Laboratory Ed Lee, Suzi Lewis

Ontario Institute for Cancer Research Scott Cain

Stanford University Eva Huala, Philippe Lamesch

University of Arizona Karla Gendler, Nerav Merchant, Nick Murphy, Edwin Skidmore

University of California, Berkeley David Goodstein, Mitch Skinner, Dan Rokhsar

University of Georgia Jim Burnette, Susan Wessler

University of Utah Carson Holt, Mark Yandell

Washington University Sally Elgin

Collaborators

Page 3: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Robert Nealy, President Sun MicrosystemsNational Press Club, October 9, 1996

We had 12.9 gigabytes of Powerpoint slides in storage on our disk drives. Ha ha ha. It freaks me out just to think about. Do you how many person centuries that is? Of clip-art manipulations? I banned Powerpoint from our company - I just edicted it. That's cool - I'm chairman, President, founder, you know, chief cook and bottle washer there and I just edicted it - I just said "out". I think we are going to have a pretty good quarter because of that. I can't say for sure, but I guarantee you - if I just gave everybody overheads, you know, blank Mila overheads with all the free pens they wanted - I could drive productivity through the roof, as opposed to having - I mean you've all seen these overheads that have 14 pieces of clipart, 13 fonts, right hand justified, spell-check, 13 colours and you know your employee is exhausted by the time it finally comes off the printer. And do they communicate anything?

Page 4: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Research <---> Education continuum

Everyone may not be able to conceive the same experiment, but everyone can work with the same data and tools.

Page 5: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Gene Annotation & Comparison: Conceptual Confusion

Page 6: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Gene Annotation Workflow:Conceptual Network

Gene Annotation & ComparisonWorkflow Conceptual Network

Page 7: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 8: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Google a solution… (-:

Page 9: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 10: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 11: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 12: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 13: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 14: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 15: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 16: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 17: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 18: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 19: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 20: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 21: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 22: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring
Page 23: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

Susan Singer, Carleton College21,780 expressed mRNAs Chamaecrista fasciculata

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Page 24: Genomics in Education: Gene Annotation and Comparison An EOT Discovery Environment Dave Micklos, Uwe Hilgert, Cornel Ghiban, Eun-Sook Jeong Cold Spring

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