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2015 LanzaTech. All rights reserved. 1 GMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 July 1, 2016 Asela W. S. Dassanayake Bioinformatics Research Scientist Model Systems Group [email protected]

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Page 1: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

2015 LanzaTech. All rights reserved.

1

GMOD powering LanzaTech

2016 GMOD Meeting

Indiana University, Bloomington, Indiana, United States

June 30 – July 1, 2016

Asela W. S. Dassanayake

Bioinformatics Research Scientist

Model Systems Group

[email protected]

Page 2: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

2

• LanzaTech - Who we are and what we do

• How GMOD is powering the information flow at LanzaTech

• Proposing a Synthetic Biology platform?

The outline

Page 3: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

3

Ed Hawkins,Climate scientist,National Centre for Atmospheric Science,University of Reading.@ed_hawkins

Page 4: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

65% of 2°carbon budget: USED

1870-2011: 1900 GtCO2

Remaining: 1000 GtCO2

Must stay in the ground

4

Carbon smart world

Page 5: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

Proprietary Acetogenic Biocatalyst

5

Worlds’ first autotrophs

Acetogenic bacterium with ability to utilize gases as sole energy and carbon source – CO– CO+H2 or CO+CO2+H2

– CO2+H2

LanzaTech has developed a proprietary

strain of Clostridium autoethanogenum

Obtained by extensive selection program,

having improved characteristics– High gas uptake and ethanol production rates– Fast growth on defined minimal media– Non-sporulating and non-motile

1

Page 6: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

1 Organism, over 20 Products…

Pyruvate

CO/H2

Acetyl-CoA

Fatty Acids,

Terpenoids

Aromatics

Ethanol

Succinate

Lactate

2,3-Butanediol

(2,3-BDO)

Biodiesel (FAEE)

3-Hydroxypropionate

(3-HP)

Isopropanol

Acetone

3-Hydroxybutyrate

(3-HB)

1,3-Butanediol (1,3-BDO)

Partnerships

Butylene

1,3-Butadiene

Biopolymers

Branched-chain

Amino Acids

Butyrate

1-Butanol

Methyl Ethyl Ketone

(MEK)

2-Butanol

Acetoin

1,2-Propanediol

1-Propanol

Jet Fuel

Isoprene

Aromatics

DiscoveryContinuous

lab-scale

fermentation

Scaled

Up1 Organism, over 25 Products…

Acetate

6

Piloting>50% selectivity

at lab scale

Page 7: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

Gas Feed Stream

Gas Reception Compression Fermentation Recovery ProductTank

HydrocarbonFuels

Ethanol

Butanediol

Acrylonitrile

Butadiene

Styrene (ABS)

Nylon 6,6 (from Adiponitrile/HDMA)

PropanolButanol

The LanzaTech Process

Page 8: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

Industrial Waste Gas

MSW WasteBiomass

We use:

Land Corn For People

We do not use:

8

A sensible path

SugarCane

Page 9: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

Strong Pipeline and Committed Partners

Commercial Production 2017

3 Commercial projects underway

Page 10: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

ArcelorMittal, Gent

10

Ground Works StartedOctober 2015

Gas Testing Station Produces Ethanol

January 2016

Connection to Steel Mill Gas Lines March 2016

Page 11: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

1 Organism, over 20 Products…

Pyruvate

CO/H2

Acetyl-CoA

Fatty Acids,

Terpenoids

Aromatics

Ethanol

Succinate

Lactate

2,3-Butanediol

(2,3-BDO)

Biodiesel (FAEE)

3-Hydroxypropionate

(3-HP)

Isopropanol

Acetone

3-Hydroxybutyrate

(3-HB)

1,3-Butanediol (1,3-BDO)

Partnerships

Butylene

1,3-Butadiene

Biopolymers

Branched-chain

Amino Acids

Butyrate

1-Butanol

Methyl Ethyl Ketone

(MEK)

2-Butanol

Acetoin

1,2-Propanediol

1-Propanol

Jet Fuel

Isoprene

Aromatics

DiscoveryContinuous

lab-scale

fermentation

Scaled

Up1 Organism, over 25 Products…

Acetate

11

Piloting>50% selectivity

at lab scale

Page 12: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

12

BIOENGINEERING

FERMENTATION

GENOMIC, TRANSCRIPTOMIC,

PROTEOMIC, METABOLOMIC DATA

BIOINFORMATICS, STATISTICS, MODELING

BIOCHEMISTRY, PATHWAY ANALYSIS

Information flow at LanzaTech

Page 13: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

13

GMOD at LanzaTech

External Collaborators

Page 14: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

14

Apollo at LanzaTech - Internal

Page 15: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

15

Transcriptional Regulator

Methyl accepting chemotaxis protein

Transcriptional Regulator

Uncharacterised ORF

Iron-Sulphur binding cluster

Roshomon

Page 16: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

16

Tuff-t

Page 17: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

17

Tuff-t

Page 18: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

1 Organism, over 20 Products…

Pyruvate

CO/H2

Acetyl-CoA

Fatty Acids,

Terpenoids

Aromatics

Ethanol

Succinate

Lactate

2,3-Butanediol

(2,3-BDO)

Biodiesel (FAEE)

3-Hydroxypropionate

(3-HP)

Isopropanol

Acetone

3-Hydroxybutyrate

(3-HB)

1,3-Butanediol (1,3-BDO)

Partnerships

Butylene

1,3-Butadiene

Biopolymers

Branched-chain

Amino Acids

Butyrate

1-Butanol

Methyl Ethyl Ketone

(MEK)

2-Butanol

Acetoin

1,2-Propanediol

1-Propanol

Jet Fuel

Isoprene

Aromatics

DiscoveryContinuous

lab-scale

fermentation

Scaled

Up1 Organism, over 25 Products…

Acetate

18

Piloting>50% selectivity

at lab scale

Page 19: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

19

• User data organization and management• BLAST Interface• Database Searching

• Literature searches and bibliography

• Genome browser

• Data Visualization

• Synthetic Biology CAD with SBML/SBOL

Proposing an Integrated Synthetic Biology platform

Page 20: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

20

Integrated Synthetic Biology platform

Page 21: GMOD powering LanzaTechgmod.org/mediawiki/images/1/15/GMOD_Asela.pdfGMOD powering LanzaTech 2016 GMOD Meeting Indiana University, Bloomington, Indiana, United States June 30 –July

21

More Users? Funding?