greg mcinerny @gregmci [email protected] interpreting and visualising outputs 2020 science

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Greg McInerny @GregMcI www.2020science.net/people/greg-mcinerny [email protected] Interpreting and visualising outputs 2 0 2 0 S C I E N C E

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Page 2: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

1 . V i s u a l i s a ti o nDO WE SPEND TOO MUCH TIME EXHIBITING OUR WORK?

Page 3: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

E x h i b i t “ W o w, X & Y l o o k s a m a z i n g ,I n e e d t o fi n d o u t m o r e ! ”

D A T A E N C O D I N G D E C O D I N G

E x p l o r e “ I w o n d e r h o w x r e l a t e s t o y ”

E x p l a i n “ X d o e s y ”

X1, Y1, x2, y2 …

G o a l s i n d a t a v i s u a l i s a ti o n

Page 4: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

E x h i b i t “ W o w, X & Y l o o k s a m a z i n g ,I n e e d t o fi n d o u t m o r e ! ”

D A T A E N C O D I N G D E C O D I N G

E x p l o r e “ I w o n d e r h o w x r e l a t e s t o y ”

E x p l a i n “ X d o e s y ”

X1, Y1, x2, y2 …

G o a l s i n d a t a v i s u a l i s a ti o n

Page 5: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

E l i t h , J . & L e a t h w i c k , J . R . ( 2 0 0 9 ) A n n u a l R e v i e w o f E c o l o g y , E v o l u ti o n a n d S y s t e m a ti c s , 4 0 , 6 7 7 – 6 9 7 .

( 1 ) R e c o d e

( 2 ) H o p e

T h u i l l e r , W . e t a l . ( 2 0 0 5 ) G E B . 1 4 , 3 4 7 – 3 5 7 .

“ w e o b s e r v e d t h a t 8 3 % o f a r ti c l e s s t u d i e s f o c u s e d e x c l u s i v e l y o n m o d e lo u t p u t ( i . e . m a p s ) w i t h o u t p r o v i d i n g r e a d e r s w i t h a n y m e a n s t o c r i ti c a l l y e x a m i n e m o d e l l e d r e l a ti o n s h i p s ”

Y a c k u l i c , C . B . e t a l . ( 2 0 1 2 ) M E E . 3 , 5 4 5 - 5 5 4

Page 6: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

( 3 ) S u m m a r i s e

5 , 0 4 1 p i x e l s o fi n f o r m a ti o n

“ t h e r e s u l t s r e v e a l a n i n t r i g u i n g p a tt e r n ”

A r a u j o , M . B . & N e w , M . 2 0 0 7 . T R E E . 2 2 , 4 2 – 4 7 .

I n d i v i d u a l m o d e l s

A v e r a g e m o d e l

H o f , C . e t a l . 2 0 1 1 . N a t u r e 4 8 0 , 5 1 6 – 5 1 9

h tt p : / / w w w . f s . f e d . u s / n e / n e w t o w n _ s q u a r e /p u b l i c a ti o n s / o t h e r _ p u b l i s h e r s / O C R /n e _ 2 0 0 1 _ i v e r s o n 0 0 1 . p d f

? !

( 4 ) C r a m i t i n

Page 7: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

E x h i b i t “ W o w, X & Y l o o k s a m a z i n g ,I n e e d t o fi n d o u t m o r e ! ”

D A T A E N C O D I N G D E C O D I N G

E x p l o r e “ I w o n d e r h o w x r e l a t e s t o y ”

E x p l a i n “ X d o e s y ”

X1, Y1, x2, y2 …

E x p l a i n ( 2 ) “ … b e c a u s e o f A & B ,X d o e s y ”?

L e t s t r y ‘ m o d e l v i s u a l i s a ti o n ’ …

Page 8: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

h tt p : / / x k c d . c o m / 1 1 3 8 /

Page 9: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

2 . I n t e r p r e t a ti o nDO WE RECOGNISEWHY WE DISAGREE?

Page 10: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

W h a t a r e t h e s e ?

G e o g r a p h i c d i s t r i b u ti o n

P o t e n ti a l d i s t r i b u ti o n

A b i o ti c e n v . r e s p o n s e

H a b i t a t s u i t a b i l i t y

E n v . / E c o . n i c h e

F u n d . / R e a l n i c h e

C l i m a t e a ffi n i t y

B i o - c l i m a t e e n v e l o p e

M u l ti v a r i a t e e n v . s p a c e

F u n c ti o n a l r e s p o n s e

S p e c i e s ’ E n v . r e s p o n s e

E n v . C o r r e l a t e s

I n t e r p o l a t e dP a tt e r n

S o b e r o n

H u n t l e y

A u s ti nE l i t h

K e a r n e y

F r a n k l i n

T h u i l l e rA r a u j oT h o m a sO ’ H a r a

N o g u e s - B r a v o

P e t e r s o n T h e o r y S t a ti s ti c a l m e t h o d

V a r i a b l e

R e s p o n s e f u n c ti o n

M o d e l t u n i n g

M o d e l s e l e c ti o n

A p p l i c a ti o n

D a t aT e r m i n o l o g y

A u d i e n c e

W h o i s r i g h t ?

Page 11: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

Reason(abstract)

idea/concept

Describe(concrete)

model

output

assumption

definition

code/formula

graph

numbers

words

words/algorithm/

formula

data

Encode(concrete)

Understand(abstract)

idea/concept

goals

Deducti ve Reasoning(agreements are c lear)

Page 12: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

Reason(abstract)

Describe(concrete)

Encode(concrete)

Understand(abstract)

model

output

code/formula

graph

numbers

data

goals

MAXENT, R, BIOMOD, OPENMODELLER, MODECO, GARP, BIOMAPPER, CANOCO, WINBUGS, OPENBUGS, DOMAIN, SPECIES, HYPERNICHE, HYKL, DISMO… ANN, AQUAMAPS, BIOCLIM, BRT, CSM, CTA, ENFA, ENVELOPE SCORE, ENV DISTANCE, BUGS, GA, GAM, GBM, GLM, GLS, MAHALANOBIS DISTANCE, MARS, MAXENT, MODECO, RANDOM FORESTS, SRE, SVM ...

Page 13: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

goals

Reason(abstract)

idea/concept

Describe(concrete)

model

output

assumption

definition

code/formula

graph

numbers

words

words/algorithm/

formula

data

Encode(concrete)

Understand(abstract)

idea/concept

Inducti ve Model l ing(understand the pitf al ls)

Page 14: Greg McInerny @GregMcI  gmcinerny@hotmail.com Interpreting and visualising outputs 2020 SCIENCE

1 . V i s u a l i s a ti o nDO WE SPEND TOO MUCH TIME EXHIBITING OUR WORK?

2 . I n t e r p r e t a ti o nDO WE RECOGNISE WHY WE DISAGREE?