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Hoş geldiniz Rothamsted ! Dr Khalid Mahmood [email protected]

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Page 1: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Hoş geldinizRothamsted !

Dr Khalid [email protected]

Page 2: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Broadbalk (1843)Evaluate combinations of Nitrogen,

Phosphorus, Potassium, Sodium, Magnesium and farmyard manure on

winter wheat

Park Grass (1856)Evaluate combinations of Phosphorus,

Potassium, Sodium, Magnesium, nitrate-N, ammonium-N, Si and farmyard manure on

meadow biodiversity

Rothamsted Research-Innovation History

Page 3: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Our History

Sir Henry Gilbert

1817-1901

Sir John Bennet Lawes

1814-1900

Developed a fundamental understanding of plant

nutrition and produced the world’s first commercial

chemical fertilisers

Rothamsted Experimental Station (now known as Rothamsted Research) was established in in 1843 by:

Page 4: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Our Achievements

Invented inorganic fertilisers

Created pyrethroid insecticides

Developed modern statistics

Created phenoxy acid

herbicides (under conditions of

wartime secrecy!)

Page 5: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Broom’s Barn (1987)

North Wyke (2009)

Harpenden (1843)

Rothamsted Research today

Page 6: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

450researchers

Rothamsted today

£37Mturnover

agricultural systems3

research

sites3

Page 7: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Rothamsted Research North Wyke

• Sustainable livestock prod.• Health & welfare• Managing livestock manures• Reducing impact on environment;

C, N and P cycling• Minimising GHG emissions• Improving nutrition • Reducing cost of production

GreenFeed

Page 8: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Soil Atmosphere Farm Management

% Moisture Rainfall Field inputs/outputs

Temperature CO2 and N2O Liveweight gain

pH Farm activities

Bulk density Labour hours

N, P & C status Machine hours

Total-POrtho-P

Sequential/composite sampler

Water

Temperature

Conductivity

Turbidity

pH

Dissolved O2

Ammonium

Nitrate

Dissolved

organic C

15 flume laboratories

Flow cell & sensors

NorthWyke Farm Platform-Highly Instrument Farm

Agri-tech Showcase at North Wyke 8th December [email protected]

Page 9: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

20:20 Wheat

DeliveringSustainable

Systems

CroppingCarbon

Designing Seeds

Current Research Strategy (2012-17)

Page 10: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Research Strategy (2017-22)

ISPG 1

Designing future wheat

ISPG 2

Soil to nutrition

ISPG 3

Sustainable systems

ISPG 4

Smart crop protection

ISPG 5Tailoring plant metabolism

Institute Strategic Programme Grants (BBSRC-ISPG)

Theme 1: Crop

Performance

Theme 2: Future Agri-Food Systems

Theme 3: Plant & Animal Health

Theme 4: Novel products

National Capabilities (NWFP, LTE, RIS)

Page 11: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Designing Future Wheat (DFW)

Tailoring Plant Metabolism (TPM)

Achieving Sustainable Systems (ASSIST)

Soil to Nutrition (S2N)

Smart Crop Protection (SCP)

Institute Strategic Programme Grants 2017-2022 (proposed)

Page 12: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Designing Future Wheat ISPG (DFW)

Overall PI: Graham Moore (JIC)Rothamsted PI: Malcolm Hawkesford

Page 13: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

• To develop novel germplasm

• To increase efficiency and sustainability by optimisation of ideotypes and resource use efficiency

• To add value and resilience by production of safe, reliable grain with durable resistance to pathogens and pests

• To generate, annotate, integrate and disseminate large scale genomic, phenotypic and regulatory datasets

Designing Future Wheat: strategic goals

Page 14: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Topic 1.1

Optimizing

ideotypes

Topic 2.2

Durable

resistance to

pathogens

and pests

Topic 1.2

Enhancing

resource

use

WP1: Increased efficiency and

sustainability WP2: Added value and resilience

WP leader: Malcolm Hawkesford (RRes) WP leader: Cristobal Uauy (JIC)

Topic 2.1

Enhanced

health

benefits

WP3: GermplasmWP leader: Simon Griffiths (JIC)

WP4: Improved data

access and analysisWP lead: Robert Davey (EI)

Topic 4.1

Genomic

resources

Topic 4.2

Open data

framework

Topic 3.1

Germplasm

base

Topic 3.2

Deployment

Designing Future Wheat Structure

Page 15: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Tailoring Plant Metabolism ISPG (TPM)

PI: Frederica Theodoulou

Page 16: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Tailoring Plant Metabolism: strategic goals

• To advance and exploit fundamental understanding of plant metabolism

• …to expand the value chains of existing (industrial) crops

• …by delivering a portfolio of high value lipids, phenolic glycosides and plant germplasm

• “From metabolite to gene to field”

Page 17: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Tailoring Plant Metabolism - our pipelines

Chassis improvement

Gen

etic

imp

rove

men

tM

eta

bo

lic e

ng

inee

rin

g

Germplasm GeneticsCandidate

genesValidation DeliveryPhenotyping

AnalysisScale-up;

fieldCandidate

genesValidation/

Transformation

Page 18: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Highlight: Camelina metabolic engineering

MarketBlue skies Strategic P/o concept Demo MarketBlue skies Strategic P/o concept Demo

• Success story: “Fish oil” produced in plants- from gene to field.

• Impacts: academic, commercial, public engagement, policy

• Current challenge: predictive metabolic engineering

• New targets for the pipeline: wax esters, structured triacylglycerols, novel fatty acids…

Page 19: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Highlight: Elucidating phenolic glycoside biosynthesis

• Untapped, heritable, chemical diversity in willow derived from phenolic glycoside pathway

MarketBlue skies Strategic P/o concept Demo MarketBlue skies Strategic P/o concept Demo

• mQTL and combined ‘omics have enabled:- Discovery of new reaction mechanisms & bioactive products- First salicinoid biosynthetic genes identified & validated

• Current challenges: Elucidation of full pathway and regulators

Page 20: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

ASSIST – joint ISPG with Centre for Ecology and Hydrology (CEH); >50% funding from NERC

Rothamsted PI: Jonathan StorkeyCEH PI: Richard Pywell

Achieving Sustainable Agricultural Systems

Page 21: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

ASSIST – Aims and key outcomes

Aim: to develop and test innovative farming systems that increase food

production & resilience to future perturbations, while reducing the

environmental footprint of agriculture

o 5+ year £11M programme; unites expertise from NERC and BBSRC

institutes with integral support from the farming industry

o Develop a large-scale network of study farms &

new sensor networks to undertake hypothesis-

driven experimentation

o Provide data, models, web portal, infrastructure

& opportunities to support complementary

research programmes & horizon topics

Page 22: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Soil to Nutrition ISPG (S2N)

• What are mechanism-basedtargets underlying sustainable agricultural systems and critical scales for intervention?

• Links with ASSIST to identify optimal combinations of policy and management interventions

• Uses nutritional stocks and flows as common currency

Page 23: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

S2N Multidisciplinary and multi-scale approach

Advising policy/industry for

improved ENU

Soil processes governing N uptake

Farm interventions for N ENU

Optimising landscape productivity,

reducing N losses and building

resilience

Cycle of mechanistic understanding and application e.g. N ENU

Soil-plant-biota mechanistic

understanding

New generation mechanistic soil

models

Novel indicators

Fit-for-purpose sustainability

metrics

Adaptive systems

SI ‘hub’

SOIL-PLANT MECHANISMS

LANDSCAPE MECHANISMS

Page 24: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Delivering Soil to Nutrition

Farm Networks

SARIC

GCRFSARISA

GFSSIRN& SSP

DEFRASIP & DTC

ASSIST& Networks

DFWSCP

TPM

LTENWFP

IBERS Roslin

S2N

Animal Nutrition

Industry and Stakeholders Partnerships

Page 25: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Smart Crop Protection ISPG (SCP)

PI: Paul Neve

Page 26: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Smart Crop Protection: Strategic relevance

Maintaining and enhancing crop protection is a critical facet of Sustainable Intensification.

“The UK needs to develop a more

integrated, whole-system approach to

animal and plant health science”

• Monitoring and surveillance

• Novel targets / new interventions

• Reduce pest adaptation

• Integration of control methods

• Evidence-based crop protection

• Minimise trade-offs

Page 27: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

An integrated approach to crop protection

Innovative, systems-based and evolution-smart approaches to crop protection to deliver sustainable crop production whilst minimising environmental impacts.

• Physiology• Molecular genetics• Biological Chemistry

• Ecology• Evolution• Population dynamics

• Modelling• Agronomy• Agroecology

Multi-scale monitoring

and intervention

Eco-evolutionary

drivers

Pest-plant-pesticide

interactions

A gene to landscape approach

Experiments Models

Page 28: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Smart surveillance of insects, pathogens & weeds

Genomic surveillance

for rapid detection of

emerging threats

Genotypic and

phenotypic studies of

insect migration

Next generation

Vertical Looking Radar

Predictive models for

pest invasion and

dispersal

Page 29: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Integrated studies of pesticide resistance evolution and management

Resistance mechanisms,

pesticide mode of

action and diagnostics

CRISPR/Cas9 gene editing for genotype / phenotype

studies

Fitness landscapes

and experimental

evolution

Integrative models for resistance

management

Proximatecauses

Ultimatecauses

Disruptivemanagement

Page 30: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Delivering Smart Crop Protection

CHAP

BBSRC

ASSIST

SCP ISPG

DFWJIC Plant Health

AgRIA

TPM S2N

GCRFGFS

NERCNewton

EU DEFRA

AGRIMETRICS INNOVATE UK

AGCHEM AGRI-TECHAHDB An integrated research

programme to deliver novel crop protection from

gene to field, faster.

Page 31: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Unique National Capabilities

Science - Knowledge exchange - Capacity building

Page 33: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Centre for Agricultural Informatics and Metrics of Sustainability

+ nearly 200 business partners

Page 34: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research
Page 35: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

International collaboration priorities

Previous organic approach lead to collaborations in 58 countries in the recent years.

International strategy now focuses on consolidating partnerships and developing new joint programmes based on:

• Aligned excellent science

• Potential for impact

• Strong partners

• Opportunities for funding

• Attractiveness for bi-directional exchange

Recent activities: CGIAR, China, Brazil, East Africa, India, few other countries (e.g. Uruguay), Global Farm Platform network

Recent opportunities:

- Newton Fund

- Grand Challenges Research Fund

Page 36: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Attract naturalenemies

Moths are pushed away

Attract moths

Trap Crop

Main Crop

Climate smart push-pull: smart maize, drought-tolerant companion crops

Brachiaria spp.Maize OPVs

Desmodium spp.

Page 37: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

CSIA China-UK Centre for Sustainable Intensification of

Agriculture

1. Crop efficiency and value: accelerating the

development of novels traits for crop improvement and

improving crop management

2. Future systems resource management: soil quality,

nutrient and water use efficiency in intensive agriculture

3. Smart crop protection: real-time management of crop

diseases, insects and weeds in intensive systems

4. Agricultural informatics: big data & tools for the whole

food chain, metrics of sustainability, modelling

Page 38: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

http://africasoils.net/

Page 39: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Increase

impactfrom research …

…with industry,

…with end-users,

…for societal

benefit.

Knowledge Exchange and Commercialisation

Page 40: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Of all sizes and across the whole supply chain...

• Trait discovery companies

• Seed businesses

• Crop protection

manufacturers

• Crop nutrition companies

• Developers of biostimulants

• Agronomy groups

• Food manufacturers

• Food retailers

• ICT companies

• Sensor manufacturers

• Remote sensing

companies

• Energy companies

We work with companies

Page 41: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

• Collaborative R&D

• Contract research

• Consultancy

• IP licensing

• Strategic alliances

• Staff exchanges

• Training

• Events

In many different ways..

RRes is partner in 3 AgriTech Centres

Page 42: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

RoCRE Offers opportunities for collaboration and co-location

AgRIA

Ideas Lab

Rothamsted Open

Innovation Forum

Agile Lab &

Office Space

International Conference & Exhibition Space

Seminar and Meeting Suites

Page 44: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Integrated ResearchProgrammes

RRes InnPod

Enterprise training

Envisioning innovations early

Project calls

Invest

Research

Innovate

IMPACT

Invest

Research

Innovate

IMPACT

Partners

SMEs

Large Businesses

VCs

Universities

AgRIAAgricultural Research & Innovation Accelerator

Accelerating Science & Innovation at Rothamsted Research

Seed funders

Farmers

Page 45: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Outline bid for ERDF funding with University of

Hertfordshire, Cranfield University and Green Triangle

AgRIA - Collaborating to accelerate Agri-Food Innovation

Page 46: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Opening up Innovation in Agritech

Aim - accelerate collaboration in the development of game-changing innovations required to address global food security challenges

Up to 300 delegates from crop protection, plant breeding, seeds, traits, crop nutrition, animal breeding, feed & health, agronomy, primary production, food manufacture & retailing

Set out AgriFood

Challenges

Define Open Innovation

Refine and Prioritise

Collaborative Workshops

18th – 20th January 2017

Page 47: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

• Bioimaging• Bioinformatics• Statistics Modelling• Integrative Systems Lab• Genomics (incl. next generation sequencing)• Migration Technologies Unit• Engineering and Electronics Unit• Analytical chemistry• Metabolomics• Lipidomics• Semiochemistry• Soil microbiology

• Containment Labs• Insect Rooms• Gene modification

RRes sciencecore capabilities

• GlassHouses• Controlled Environment• Field Phenotyping• GM site• Radar• Farms

Lawes Open Inn. HubFlexible sharing spaceResearch Accelerator

Conferencing Facilities

Daniel HallIncubator facilities

RRes core capabilities:

shared with innovation

partners

RoCRE: shared with

Innovation partners

RRes general

research labs:

• Insect Traps & Survey• Long Term Experiments• National Willow Collection

Building a science and innovation hub in

Harpenden based on our core capabilities

RRes sciencelaboratories

Page 48: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research
Page 49: Hoş geldiniz Rothamsted - Agritech Networkagritech-network.com/rothamsted/intro.pdf · 2017-01-30 · Cropping Carbon Designing Seeds Current Research Strategy (2012-17) Research

Thank You