identification of tarp phosphorylation sites and their ... · nida neuroproteomics center ,...
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Identification of TARP Phosphorylation Sites and Their Significance in the Brain
Susumu Tomita @ SHM BE17
Department of Cellular and Molecular Physiology
NIDA Neuroproteomics Center , December 13, 2008
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NMDA
Glutamate
AMPAMg2+
TARPsNMDAreceptor
AMPAreceptor
g TARPs
PSDNa+Ca2+, Na+
Transmembrane AMPAR Regulatory Proteins
(-2/stargazin, -3, -4, -8 and -5, -7)
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Loss of AMPAR in hippocampus of TARP/-8 KOs
GluR1 staining in Wt.
GluR1staining in8 KORouach N. et al. (2005) Nat. Neurosci.
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TARP/Stargazin is phosphorylated in brain
StargazinPSD95
Stargazin
Synapto
TubulinSynaptophysin
PSD95
y pphysin
PPase
p y
+-PPase
Tomita et al (2005) Neuron
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CaMKII and PKC are involved in stargazin phosphorylation in neurons
Stargazin
Stargazin
Tomita et al (2005) Neuron
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TARPAMPA receptor
TARPs NMDA receptor
PSDPSD95
Ca2+
XX
PKCCaMKII
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Amino acid sequence of stargazin cytoplasmic domain
DRHKQLRATA RATDYLQASA ITRIPSYRYR YQRRSRSSSR STEPSHSRDA SPVGVKGFNTQLPSTEISMYT LSRDPLKAAT TPTATYNSDR DNSFLQVHNC IQKDSKDSLH ADTANRRTTPVQ Q
Phosphorylate recombinant proteins in vitroPhosphorylate recombinant proteins in vitro
Digest by trypsin
Fraction by HPLC
MASS-spec
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Both CaMKII and PKC directly phosphorylate stargazin cytoplasmic domain in vitro
CaMKII
PKC
CoomassieB illi tBrilliant
Blue
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HPLC
P32
715.2638 Da, corresponding to residues 223-227 with one phosphorylation site (IPpSYR)
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Radio Edman sequencing
http://www2.bioch.ox.ac.uk/immunoch/PCFWebSite/Sequencing.
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DRHKQLRATA RATDYLQASA ITRIPSYRYRDRHKQLRATA RATDYLQASA ITRIPSYRYRYQRRSRSSSR STEPSHSRDA SPVGVKGFNT LPSTEISMYT LSRDPLKAAT TPTATYNSDRLPSTEISMYT LSRDPLKAAT TPTATYNSDRDNSFLQVHNC IQKDSKDSLH ADTANRRTTPV
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DRHKQLRATA RATDYLQASA ITRIPSYRYRYQRRSRSSSR STEPSHSRDA SPVGVKGFNTYQRRSRSSSR STEPSHSRDA SPVGVKGFNT LPSTEISMYT LSRDPLKAAT TPTATYNSDRDNSFLQVHNC IQKDSKDSLH ADTANRRTTPVDNSFLQVHNC IQKDSKDSLH ADTANRRTTPV
D R H K Q L R A T A R A T D Y L Q A S A I T R I P S1Y R Y RY Q R R S2R S3S4S5R S6T E P S7H S8R D A S9P V G V K G F N TL P S T E I S M Y T L S R D P L K A A T T P T A T Y N S D RD N S F L Q V H N C I Q K D S K D S L H A D T A N R R T T P V
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Alternative approach with 2D gel
DRHKQLRATA RATDYLQASA ITRIPSYRYRYQRRSRSSSR STEPSHSRDA SPVGVKGFNTYQRRSRSSSR STEPSHSRDA SPVGVKGFNT LPSTEISMYT LSRDPLKAAT TPTATYNSDRDNSFLQVHNC IQKDSKDSLH ADTANRRTTPVDNSFLQVHNC IQKDSKDSLH ADTANRRTTPV
Purified recombinant STG-mutIn vitro phosphorylation by CaMKII and PKCIn vitro phosphorylation by CaMKII and PKCTPCK-Trypsin: K-X; R-X2D gel (1st Electrophoresis 2nd PLC)2D gel (1st Electrophoresis, 2nd PLC)
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PKC phosphorylation sites
wild type S9A (s123456789) -S2R- -S3S4S5R--IPS1YR-
PKC 5
6
3
5
6
3
5
6
5
6
5
6
mat
ogra
phy
yp ( )
-DAS9PVGVK--S6TEPS7HS8R--S6TEPS7HS8R--S3S4S5R- -S3S4S5R-
12
34 4
12
31
2 4
12
3
12 4
34
Electrophoresis+
Chr
om
PKC4
3
5
6
45
6 6
53
5
6
3
54
6
41
2 21
43
12
34
12
34 1
2
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CaMKII phosphorylation sites
wild type S9A (s123456789) -S2R- -S3S4S5R--IPS1YR-
CaMKII
Chr
omat
ogra
phy
1 2 3 4 5 6 1 2 3 4 5 6
1 23
45 6
1 23 4 5 6
1 23 4 5 6
-DAS9PVGVK--S6TEPS7HS8R--S6TEPS7HS8R--S3S4S5R- -S3S4S5R-
Electrophoresis+ -2 2
CaMKII1 2
34
56
1 2 3 4 5 6
1 2 3 4 5 61 2 3 4 5 6
1 3 4 5 61 2 1 2 3 1 2 3
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D R H K Q L R A T A R A T D Y L Q A S A I T R I P S1Y R Y RY Q R R S2R S3S4S5R S6T E P S7H S8R D A S9P V G V K G F N TL P S T E I S M Y T L S R D P L K A A T T P T A T Y N S D RD N S F L Q V H N C I Q K D S K D S L H A D T A N R R T T P V
Molecular Mechanisms for synaptic plasticityMolecular Mechanisms for synaptic plasticityGenetic mouse modelElectrophysiological analysisElectrophysiological analysisIsolation of P-specific binding proteins
AMPA receptor TARPs NMDA receptor
PSDPSD95
Ca2+
XXPKC
CaMKII
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Acknowledgements
Tomita LabTomita Lab.Kwang Kim
NIDA Neuroproteomics Center / KECK facilityp y
Kathryn StoneMar LprestiMary LprestiJ. Myron Crawford
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Stargazin phosphorylation in cerebro-cortical neurons
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Phospho amino acid analysis
Stargazin
Cerebro-cortical neuron Stargazin transfected CHO cells
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Nine serine residues in stargazin are phosphorylated.Wild type -IPS1YR- -S2R- -S3S4S5R-
S TEPS HS R S TEPS HS R DAS PVGVK S9A(S )-S6TEPS7HS8R- -S6TEPS7HS8R- -DAS9PVGVK- S9A(S123456789)
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Phospho-mimic stargazin (S9D) enhances the AMPA EPSCs
GFP-fluorescenceDIC Overlay
Tomita et al (2005)
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Phosphorylation of stargazin is necessary for LTP
Control
S9A
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Generate P-specific antibodiesE
SEQ U ENCE PROJECT N AME PRO JECT#SEQ U ENCE PROJECT N AME PRO JECT#TRI P(P-S)YRYR - C PHOSPHO STARGAZIN ( S22 8) PKC SITE AB1 543 5 TRI PSYRYR - C STARGAZIN ( S22 8) PKC SIT E CONT ROL AB1 543 5 RRSR( P-S) S(P-S)RSTE - C PHOSPHO STARGAZIN (S239/241)CAMKII AB15436-1 RRSRSS(P-S)R STE - C PHOSPHO STARGAZIN (S241 ) CAMKII AB15436-3( ) ( )RRSR( P-S) SSRSTE - C PHOSPHO STARGAZIN ( S239) CAMKII AB15436-2 RRSRS(P-S)SRSTE - C PHOSPHO STARGAZIN (S240)PKC/CAMKII AB15438-8 RRSRSSSRSTE - C STARGAZIN (S239/240/241 ) CAMKII-CONTROL AB15436
YQR RSRSSSRSTE - CSTARGAZIN (S237/239/240/241 ) PKC/CAMKII - UNMODIFIED CONTROL AB15438YQR RSRSSSRSTE - C UNMODIFIED CONTROL AB15438
RDA( P-S)PVGVK - C PHOSPHO STARGAZIN (S253)OTHER KINASE AB15437 RDA S PVGVK - C PHOSPOSTARGAZIN (S253) OTHER KINASE-CONTROL AB15437 YQR R( PS)R(PS)SSRSTE - C STARGAZIN (S237/239) PKC/CAMKII AB15438-2 YQR R( PS)RS(PS)SR STE - C STARGAZIN (S237/240) PKC/CAMKII AB15438-3 YQR R( PS)RSS(PS)R STE - C STARGAZIN (S237/241) PKC/CAMKII AB15438-4 YQR RSR(PS) (PS)SR STE - C STARGAZIN (S239/240) PKC/CAMKII AB15438-5 YQR RSRS( PS) (PS)R STE - C STARGAZIN (S240/241) PKC/CAMKII AB15438-6 YQR R( PS)RSSSRSTE - C STARGAZIN (S237) PKC/CAMKII AB15438-7
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Dot blotting with P- & non-P peptides
Kwang Kim
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Dot blotting with P- & non-P peptides
Kwang Kim
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9 sites x (A or D) = 29 = 512 ……( )
C t i h it b kiCategorize each sites by kinases.
2 classes (total 9 sites) x (A or D) = 4 !( ) ( )
NMDA induces dephosphorylation of stargazinNMDA induces dephosphorylation of stargazin
min
Stargazin
min
Tomita et al (2005)