introduction: cloud, linux and basic skills
DESCRIPTION
Introduction: Cloud, Linux and basic skills. Mick Watson Director of ARK-Genomics The Roslin Institute. Structure. Setting up a new Cloud instance Accessing Linux via Putty Introduction to Linux command-line Basic manipulations Quality control of Illumina data - PowerPoint PPT PresentationTRANSCRIPT
![Page 1: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/1.jpg)
Introduction: Cloud, Linux and basic skills
Mick WatsonDirector of ARK-Genomics
The Roslin Institute
![Page 2: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/2.jpg)
Structure• Setting up a new Cloud instance• Accessing Linux via Putty• Introduction to Linux command-line• Basic manipulations• Quality control of Illumina data• Trimming of Illumina data
![Page 3: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/3.jpg)
Why are you here?
What do you want to do?
![Page 4: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/4.jpg)
This is going to be hard
How much do you want to succeed?
![Page 5: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/5.jpg)
This can change your life / career
This could make you very employable
![Page 6: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/6.jpg)
You can’t learn this in a week
You will need to devote time, and work hard
![Page 7: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/7.jpg)
Some of you will do this
Many of you won’t
![Page 8: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/8.jpg)
Who wants to succeed?
![Page 9: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/9.jpg)
Recommendation• Buy a laptop (lots of RAM, 64bit)• Install Ubuntu, or BioLinux• Force yourself to work on the command-line• Get on your institute’s linux servers• Get on your institute’s linux clusters• Use Google!• Set yourself a task and work at it. Do it yourself. Use Google.
Only ask for help when really stuck• Work at it – the rewards are huge• These skills are in huge demand -> jobs, pay rises, promotion,
papers etc etc
![Page 10: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/10.jpg)
The course• Take your time• Read the materials• Understand the materials• Complete the exercises• Think about what is happening
![Page 11: Introduction: Cloud, Linux and basic skills](https://reader033.vdocument.in/reader033/viewer/2022051002/56815c2b550346895dca0284/html5/thumbnails/11.jpg)
Don’t panic!