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Ion-regulatory and developmental physiology of giant clams (Genus Tridacna) and their conservation status on the island of Mo’orea, French Polynesia. By Eric J. Armstrong A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Integrative Biology in the Graduate Division of the University of California, Berkeley Committee in charge: Professor Jonathon H. Stillman, Co-Chair Professor Mary E. Power, Co-Chair Professor Caroline M. Williams Fall 2017 Professor Rosemary G. Gillespie

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Page 1: Ion-regulatory and developmental physiology of giant clams ...Tridacna) which cannot decouple changes in environmental temperature from alterations in body temperature (i.e. are poikilothermic)

Ion-regulatory and developmental physiology of giant clams (Genus Tridacna) and their

conservation status on the island of Mo’orea, French Polynesia.

By

Eric J. Armstrong

A dissertation submitted in partial satisfaction of the

requirements for the degree of

Doctor of Philosophy

in

Integrative Biology

in the

Graduate Division

of the

University of California, Berkeley

Committee in charge:

Professor Jonathon H. Stillman, Co-Chair

Professor Mary E. Power, Co-Chair Professor Caroline M. Williams

Fall 2017

Professor Rosemary G. Gillespie

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Page 3: Ion-regulatory and developmental physiology of giant clams ...Tridacna) which cannot decouple changes in environmental temperature from alterations in body temperature (i.e. are poikilothermic)

Ion-regulatory and developmental physiology of giant clams (Genus Tridacna) and their

conservation status on the island of Mo’orea, French Polynesia.

© 2017

by

Eric J. Armstrong

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Abstract

Ion-regulatory and developmental physiology of giant clams (Genus Tridacna) and their

conservation status on the island of Mo’orea, French Polynesia.

By

Eric J. Armstrong

Doctor of Philosophy in Integrative Biology

University of California, Berkeley

Professor Jonathon H. Stillman, Co-Chair

Professor Mary E. Power, Co-Chair

Marine species face several challenges as a result of human activities including direct effects on

populations (e.g. overharvesting) and indirect impacts on individuals (e.g. physiological

responses to ocean warming and acidification). Ameliorating these impacts requires successful

regulation at both the population and physiological levels. One group of critically threatened

organisms are the so called “giant clams” (genus Tridacna) of tropical coral reefs. Like corals,

giant clams possess calcifying larvae and host symbiotic microalgae and are therefore susceptible

to environmentally-driven failure of biomineralization and symbiotic disruption. In addition,

giant clams are economically important fisheries species which have been severely overexploited

throughout much of their range. While marine reserves have been established to replenish

dwindling giant clam stocks, their efficacy in promoting population recovery remains unknown.

Similarly, little is known regarding the magnitude of climate-change associated physiological

effects on giant clams. This stems, in part, from a lack of knowledge regarding the response of

early life-history stages to warming and acidification and because the molecular mechanisms

regulating acid-base homeostasis and symbiont photosynthesis in giant clams remain poorly

characterized. I addressed these knowledge gaps in populations of the small giant clam,

Tridacna maxima, from across a network of marine protected areas (MPAs) on Mo’orea, French

Polynesia. I employed a combined physiological and ecological approach to (1) investigate

mechanistic processes underlying acid-base regulation within giant clams, specifically in relation

to maintenance of host-symbiont homeostasis, (2) measure the effects of increased temperature

and elevated pCO2 on giant clam fertilization success, and (3) assess the efficacy of a recently

established Marine Protected Area Network in promoting conservation and recovery of this

species in an exploitative environment.

I demonstrate that giant clams regulate symbiont photosynthesis through the activity of an ion-

transport protein, vacuolar-type H+-ATPase (VHA), which is strongly localized in close

proximity to symbiotic algae. I further show that clam VHA actively promotes algal

photosynthesis, increasing rates of O2 production and holobiont metabolic rate, and likely

represents a convergent exaptation for carbon concentration shared by reef-building corals. This

process has implications for climate-related responses and may offset the negative impacts of

future ocean acidification in these species. I also present the first data demonstrating giant clam

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early life-history responses to climate change drivers and show that syngamy in giant clams is

extremely sensitive to environmental warming. Finally, I demonstrate the significant, positive,

effect of MPA establishment in permitting recovery of overharvested giant clam populations. T.

maxima populations have increased approximately 3-fold in Mo’orea’s protected sites relative to

non-protected controls and this rate of recovery is significantly higher than the global average for

marine reserves. Taken together, these results suggest that effective regulation at both the

population and physiological level may permit the recovery and persistence of giant clams in the

face of anthropogenic challenges.

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TABLE OF CONTENTS

INTRODUCTION ...................................................................................................................... iii

ACKNOWLEDGEMENTS ..................................................................................................... viii

CHAPTER 1 .................................................................................................................................. 1

Symbiont photosynthesis in giant clams is promoted by host H+-pumping.

ABSTRACT ................................................................................................................................ 1

INTRODUCTION ....................................................................................................................... 1

METHODS.................................................................................................................................. 3

RESULTS AND DISCUSSION ................................................................................................. 6

CONCLUSION ........................................................................................................................... 9

ACKNOWLEDGEMENTS ........................................................................................................ 9

REFERENCES .......................................................................................................................... 10

FIGURE CAPTIONS ................................................................................................................ 14

FIGURES .................................................................................................................................. 15

APPENDICES ........................................................................................................................... 20

CHAPTER 2 ................................................................................................................................ 24

Elevated temperature, but not acidification, reduces fertilization success in the small giant clam,

Tridacna maxima.

ABSTRACT .............................................................................................................................. 24

INTRODUCTION ..................................................................................................................... 24

METHODS................................................................................................................................ 26

RESULTS.................................................................................................................................. 28

DISCUSSION ........................................................................................................................... 29

CONCLUSION ......................................................................................................................... 31

ACKNOWLEDGEMENTS ...................................................................................................... 31

REFERENCES .......................................................................................................................... 32

TABLES .................................................................................................................................... 37

FIGURE CAPTIONS ................................................................................................................ 39

FIGURES .................................................................................................................................. 40

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CHAPTER 3 ................................................................................................................................ 43

Symbiont photosynthesis in giant clams is promoted Marine reserves have facilitated rapid

recovery of Tridacna maxima on the island of Mo’orea, French Polynesia.

ABSTRACT .............................................................................................................................. 43

INTRODUCTION ..................................................................................................................... 43

METHODS................................................................................................................................ 46

RESULTS.................................................................................................................................. 47

DISCUSSION ........................................................................................................................... 48

ACKNOWLEDGEMENTS ...................................................................................................... 50

REFERENCES .......................................................................................................................... 52

TABLES .................................................................................................................................... 57

FIGURE CAPTIONS ................................................................................................................ 58

FIGURES .................................................................................................................................. 59

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INTRODUCTION

The world’s oceans are entering an era of profound change, with rapid and major deviations from

the abiotic conditions which have prevailed largely unaltered since the start of the Neogene circa

25 mya (Jackson 2008). Driven mainly by anthropogenic emissions of carbon dioxide (CO2),

this rapid change has resulted in a thermal destabilization of Earth’s climate system with global

mean temperature expected to rise by as much as +4 °C over the next century (IPCC 2007). The

biological consequences of this “global warming” are already significant (Stillman and

Armstrong 2015) and are likely to continue given the importance of temperature as a biological

forcing agent. Indeed, it has long been argued that temperature is the single most important

driver affecting biological systems influencing as it does every aspect of an organism’s

physiology from the behavior of molecules to the integration of complex systems within the

whole organism (Hochachka and Somero 2001). In recent years, increased mean annual

temperatures have been shown to have significant consequences for many marine taxa including

large-scale range shifts (Sorte et al. 2010), and an increase in the frequency and severity of

“bleaching events” which are disruptions in animal-algal symbioses (Hoegh-Guldberg 1999;

Hoegh-Guldberg et al. 2007; Logan et al. 2014). However, climate responses to increased

atmospheric CO2 are diverse and include alterations in many other environmental variables than

temperature alone.

An additional example is the large-scale accumulation of CO2 in the oceans which has resulted in

a reduction of oceanic pH commonly known as ocean acidification. Reduced pH and

accompanying reductions in the saturation state of the exoskeletal mineral aragonite have been

experimentally shown to negatively impact fertilization success and to drastically reduce larval

survival in many taxa (Kurihara 2008; Byrne 2011a; Byrne and Przeslawski 2013). In

combination, these climatic trends in temperature and pH threaten the diversity and stability of

marine ecosystems across the globe and may have especially strong impacts in the tropics where

many species may already be living at or near their respective thermal maxima and have limited

acclimation capacity (Stillman 2003). Within such ecosystems, the most vulnerable organisms

are likely to be calcifying marine invertebrates which cannot decouple changes in environmental

temperature from alterations in body temperature (i.e. are poikilothermic) and whose carbonate

shells are prone to dissolution under the synergistic effects of elevated temperature and pCO2

(Toonen et al. 2011).

In addition to these abiotic challenges, marine populations face the direct threat of

overexploitation as a result of commercial and local harvesting efforts (Aburto-Oropeza et al.

2011). Recent analyses indicate that as much as 63% of assessed fish stocks worldwide have

been overharvested and require rebuilding, and suggest that the establishment of lower

exploitation rates are needed to prevent the collapse of currently vulnerable species (Worm et al.

2009). No-take marine reserves have been promoted as effective tools for protecting vulnerable

species, promoting biodiversity, maintaining ecosystem function, and permitting recovery of

overexploited species (Balmford et al. 2004; Aburto-Oropeza et al. 2011). However, less than

0.1% of the world’s oceans are currently protected from extractive activities and increasing

coastal populations are putting further strain on even the most remote marine resources (Vieux et

al. 2004).

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At the intersection of all three of these challenges (warming, acidification, and overexploitation)

lie coral reef ecosystems. Coral reef ecosystems are some of the most diverse habitats on earth

and are of major importance to many island communities where they support the development of

local and national economies (Ferraris and Cayré 2003; Kronen et al. 2010; Pickering et al.

2011). Reefs, however, are becoming critically threatened by overfishing as a result of

overpopulation and overexploitation of commercial fisheries species (Hughes 2003; Pandolfi et

al. 2003). A recent global analysis has indicated that 75% of coral reef ecosystems are currently

severely threatened by anthropogenic pressure with this figure is predicted to rise to 90% by

2030 and 100% by 2050 (Burke et al. 2011). Even in remote regions of the South Pacific where

human impacts on reefs have been less intense (Vieux et al. 2004), extractive local economies

have resulted in incipient overexploitation of marine resources (Planes et al. 1993; Van

Wynsberge et al. 2016). Within coral reef ecosystems, the most vulnerable organisms are likely

to be corals themselves along with other calcifying marine invertebrates like giant clams (genus

Tridacna) which cannot decouple changes in environmental temperature from alterations in body

temperature (i.e. are poikilothermic) and whose carbonate shells are prone to dissolution under

the synergistic effects of elevated temperature and pCO2. Among those species of special

concern are the so-called “giant clams” of the genus Tridacna.

Giant clams are the largest living bivalves and are found throughout the tropical Indo-Pacific

where they rank among the most charismatic of coral reef inhabitants. Though tridacnid clams

share characteristics with other well-studied bivalves, they are unique in their ability to host

symbiotic dinoflagellate algae, genus Symbiodinium, and are important both culturally and

economically in many developing island territories (e.g. the Solomon Islands) where they are

harvested for the seafood, ornamental shell and aquarium hobbyist trades (Pickering et al. 2011;

Toonen et al. 2011). In these regions, giant clam products can rank as the number one national

export with annual export production values exceeding $90 million USD or ~5% of total Gross

Domestic Product (Solomon Islands, 2011 UN World Statistics GDP estimates). As a result of

these intensive harvesting efforts, many wild stocks of giant clams are now heavily overexploited

and all species are currently listed under the Convention on International Trade in Endangered

Species (CITES) as endangered species of concern, vulnerable to local extirpations (Lucas et al.

1989; Firdausy and Tisdell 1992; Neo and Todd 2013).

Although commercial efforts are currently underway to utilize mariculture of T. maxima to meet

market demands and replenish wild stocks, these efforts are likely to be hampered by a lack of

knowledge regarding T. maxima’s vulnerability to ocean warming and acidification predicted to

result from climate change (Watson et al. 2012). Unlike many other important mariculture species,

few studies have explicitly investigated the effects of climate drivers on giant clam physiology and

none have investigated these effects in larval stages. Juvenile Tridacna squamosa giant clams

suffered 81% lower survivorship after 60 days of exposure to ocean conditions predicted by the year

2100 (Watson et al. 2012). However, these negative effects could be offset by increased symbiont

photosynthesis (Watson 2015) suggesting that, through the activity of its algal partners, the

Tridacna-Symbiodinium holobiont may be resilient to ocean acidification. Despite the clear and

encouraging implications of these findings for management of this species under future ocean

conditions, the physiological mechanisms behind holobiont photosynthetic regulation remain

unresolved. Furthermore, our lack of understanding of the effects of ocean warming and

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acidification on early life history stages severely limits our ability to make predictions about how

giant clams species may fare under a changing climate.

In this thesis, I address these knowledge gaps using a combined physiological and ecological

approach in the small giant clam, Tridacna maxima. In Chapter 1, I discuss the role that a class

of ion-transport proteins, the vacuolar H+-ATPases (VHAs), play in regulating carbon flow

between giant clams and their dinoflagellate symbionts. I also discuss potential implications of

this carbon concentration mechanism for persistence of giant clams under a changing climate. In

Chapter 2, I investigate the response of fertilization in giant clams to exposure to elevated

temperature and pCO2 congruent with predictions of ocean conditions by the end of the century.

My data show, that while adult giant clams may be resilient to the effects of ocean warming and

acidification, early life history stages are likely extremely vulnerable to elevated temperature. In

Chapter 3, I assess the efficacy of a series of marine protected areas, the Plan de Gestion de

l’Espace Maritime network (PGEM), established in 2004 on the island of Mo’orea, French

Polynesia, for preserving and promoting recovery of previously overexploited populations of the

small giant clam, Tridacna maxima. I document the phenomenal success these protected areas

have had in restoring populations of giant clams on Mo’orea’s reefs and discuss the potential role

of local involvement and Polynesian cultural practices in effecting this success. I envision that

the paired physiological and transcriptomic approach of this study will serve as a comprehensive

system for elucidating the molecular mechanisms underlying this giant clam species’

physiological responses to ocean warming and acidification – information which is vitally

relevant for future management of these important threatened species under future ocean

conditions.

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Ferraris J, Cayré P (2003) Les pêcheries récifales dans le Pacifique sud : d’une gestion intuitive

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Firdausy C, Tisdell C (1992) Demand for giant clams in Indonesia and their status: a survey of

four coastal villages in Bali and Java. In: Tisdell C (ed) Giant clams in the sustainable

development of the South Pacific. Australian Centre for International Agricultural Research,

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Physiological Evolution. Oxford University Press

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reefs. Mar Freshw Res 50:839–866.

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Sale PF, Edwards a J, Caldeira K, Knowlton N, Eakin CM, Iglesias-Prieto R, Muthiga N,

Bradbury RH, Dubi a, Hatziolos ME (2007) Coral reefs under rapid climate change and

ocean acidification. Science 318:1737–42. doi: 10.1126/science.1152509

Hughes TP (2003) Climate Change, Human Impacts, and the Resilience of Coral Reefs. Sci

(New York, NY) 301:929–933. doi: 10.1126/science.1085046

Jackson JBC (2008) Ecological extinction and evolution in the brave new ocean. Proc Natl Acad

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Kronen M, Vunisea A, Magron F, McArdle B (2010) Socio-economic drivers and indicators for

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management strategies. Mar Policy 34:1135–1143. doi: 10.1016/j.marpol.2010.03.013

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ACKNOWLEDGEMENTS

“It is good to have an end to journey toward, but it is the journey that matters in the end.”

⸺ Ursula K. Le Guin

The completion of this thesis has been one of the most humbling and rewarding journeys of my

life. Along the way I’ve been blessed with the help and support of many colleagues, friends, and

family whose intellect, comradery, and humor made this undertaking at some times more

bearable, and at all times more enjoyable. Any summary such as this is bound to be incomplete,

but to all those friends, mentioned and unmentioned, who have been a part this endeavor I say

"thank you", deeply and from the heart. Without the support and inspiration of these, and many

other, truly incredible and brilliant people I’m come to know throughout this endeavor, this work

would never have been completed.

First and foremost, I am grateful for the support and mentorship provided over the past six years

by my advisor, Jonathon Stillman. His passion and expertise in designing truly integrative

projects have made me a better scientist and, I’m eternally grateful for his encouragement to

develop an independent project on the physiology and natural history of giant clams. I’m also

exceedingly grateful for the many professional development opportunities he has opened-up for

me including numerous introductions over the years to leaders in the field of ecophysiology,

some of whom I’m happy now to know as friends. I would also like to thank my committee

members Mary Power, Caroline Williams, and Rosie Gillespie for their guidance and support.

All three are among the most brilliant people I’ve had the privilege of interacting with. As my

co-advisor, Mary Power took a chance on me as a student and I’m eternally grateful for that

opportunity. From our very first conversation about Robin Wall Kimmerer’s beautiful book

“Gathering Moss”, I’ve been awed at Mary’s capacity to so effortless blend rigorous science

with a love and celebration of the organisms under study. I’ve also learned from her the sheer

joy and power of adopting an interdisciplinary approach to research. I have immense gratitude

and respect for Caroline Williams whose insightful conversations always opened my eyes to a

new way of seeing approaching ecophysiological hypotheses and whose thoughtful review of my

work greatly improved the quality of this manuscript. Last, but not least, a thank you to

Rosemary Gillespie, for our long conversations about the potential of physiological sensitivity as

an agent of isolation and who first instilled in me the wonder and magic of island ecosystems.

I am also grateful to the following colleagues and staff for their time and generosity in

contributing valuable advice (academic or otherwise), feedback, and/or reagents: Alex

Gunderson (UC Berkeley), Piero Calosi (U Plymouth / U Rimouski), Martin Tresguerres

(Scripps Institution of Oceanography), Nathan Miller (San Francisco State University), Cindy

Looy (UC Berkeley), Justin Brashares (UC Berkeley), Brent Mishler (UC Berkeley), Stephanie

Carlson (UC Berkeley), David Lindberg (UC Berkeley), Vince Resh (UC Berkeley), Sue-Ann

Watson (James Cook University), George Somero (Hopkins Marine Station), and Masaya

Morita (Sesoko Marine Station).

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I was incredibly fortunate to conduct much of this work among the beautiful islands and even

more beautiful people of French Polynesia. I am eternally indebted to the faculty, staff, and

students of the Richard B. Gump and CRIOBE field stations on Mo’orea, for introducing me to

the thrills of tropical field research. In particular, I owe an immense debt of gratitude to Vaimiti

Dubousquet who was instrumental in getting this research started. I arrived a stranger in a

strange land and she welcomed me with more warmth than I could have expected or will ever be

able to repay. Her scholarship and dedication are truly worthy of emulation. Mauruuru roa et

de gros bisous à elle ! To Maeva Beltrand, Agatha Korczak, and Isis Asset whose humor,

support, and willingness to speak English with me made the endless lab hours at CRIOBE

immensely more enjoyable. To Suzie Mills (CRIOBE) and Ricardo Beldade (CRIOBE) for

providing me with such an incredible place to conduct my research and for their support,

mentorship, and friendship which vastly ameliorated the taxing trials of sea hare mariculture. I

was also incredibly fortunate to twice teach the Mo’orea Field Course at the Gump Station

where my life was forever changed through my interactions with the amazingly talented students

and the incredibly kind and dedicated staff. In particular, I am grateful to Valentine Brotherson

and Irma You Sing for their help and their contagious positivity. To my fellow graduate student

instructors, Camilla Souto, Dave Kurz, Natalie Stauffer-Olson, and Ignacio Escalante - those

warm days on the beach and dark nights amongst urchin spines and mangrove roots are some of

my most cherished memories from graduate school.

I owe an especially great debt of gratitude to my friends Tessa Page and Richelle Tanner who are

among the most brilliant scientists I know and whose constant advice and support made this

journey possible. Thanks, too, to Nick Burnett for offering me the chance (i.e. forcing me) to get

out of the lab every so often and see more of the beautiful California coast – those frigid

mornings searching through the surf are still some of the best. My deepest gratitude to Adam

Paganini and Rachel Diner for teaching me the ropes of the Stillman Lab all those years ago and

for whose infectious humor and spirit made the Romberg Tiburon Center such a great place to

start my career. To my roommates, Emily Lam, Emily King, and Marty McCoy, thanks for

being such amazing positive influences in my life and for daily putting up with my sarcasm. To

my friends from Plymouth, Théophile Lienhardt, Leela Chakravarti, and Michael Jarrold who

made the first major scientific projects of my career so much more fun to complete, a warm “4th

of July” toast. There are truly no better people in the world to talk science with over a glass of

cider. Finally, I’m thankful every day for my incredible good fortune in having met Bastien

Bouchaud. His friendship, love, and the occasional encouraging prod to get back to writing went

a long way towards seeing this work through to completion.

To my family – Arthur, Barbara, and Brittany – no words can suffice to convey my gratitude.

Their unconditional love has been a constant throughout my life and their encouragement has

given me the confidence to pursue my passions fearlessly. Although I never did fulfill my

childhood dream of becoming a paleontologist, I didn’t land too far off-track. Everything I’ve

achieved I owe to their unwavering support. I also owe them thanks for their help in completing

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the work associated with Chapter 3; while there are certainly more arduous tasks than snorkeling

on Tahitian reefs, I’m eternally grateful for the time spent in paradise with them.

Finally, immense thanks to Richard Hill (Michigan State University), who was the primary

catalyst in my academic career and who first introduced me to the field of ecophysiology. His

knowledge, passion, and dedication to science are truly inspiring. Ever since he shepherded my

first field season on the sea, I’ve been grateful for the monumental, positive, difference he’s

made in my life. It has been an honor, privilege, and joy going from student to friend with such

a kind, generous, and brilliant mentor.

I’m also grateful to the following funding agencies for their support in completing the work

presented herein: The United States Department of Defense National Defense Science and

Engineering Fellowship, the UC Berkeley Graduate Division, the Berkeley Chapter of Sigma Xi,

the Society for Experimental Biology, and the Company of Biologists.

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Eric J. Armstrong, Jinae N. Roa, Martin Tresguerres & Jonathon H. Stillman

ABSTRACT

Giant clams (genus Tridacna) are the largest living bivalves and, like reef-building corals, host

symbiotic dinoflagellate algae (Symbiodinium) which are energetically important.

Consequently, giant clams are highly anatomically modified to facilitate the capture of light for

photosynthesis. However, in addition to light, photosynthesis requires the supply of inorganic

carbon. In corals, vacuolar-type H+-ATPase (VHA) has been implicated as a carbon

concentrating mechanism (CCM) and VHA-induced acidification of the coral symbiosome leads

to increased Symbiodinium productivity. We investigated whether VHA plays an analogous role

in the small giant clam, Tridacna maxima. We demonstrate that VHA is abundantly expressed in

epithelial cells of Symbiodinium-containing tubules in the siphonal mantle of T. maxima, and

that inhibition of VHA impairs photosynthetic oxygen production by ~40%. Given that algal

productivity in light-exposed mantle increases holobiont aerobic metabolism ~five-fold and that

translocated fixed carbon exceeds metabolic demand, we conclude that VHA activity in the

siphonal mantle confers strong energetic benefits to the host clam potentially permitting the

evolution of gigantism in the Tridacna lineage. Furthermore, the demonstrated convergent role

of VHA in promoting Symbiodinium photosynthesis in giant clams and corals suggests VHA-

driven CCM as a common exaptation in photosymbioses that deserves further investigation in

other taxa.

INTRODUCTION

Photosymbiosis, a partnership in which a host organism harbors photosynthetic microbial or

algal cells, provides competitive advantages to hosts through increased energy availability, and

to symbionts through translocation of nutrients, particularly dissolved organic nitrogen (Roth

2014). Perhaps the most famous and well-studied photosymbiosis is the partnership between

dinoflagellate algae of the genus Symbiodinium and their cnidarian coral hosts. However,

similar symbiotic partnerships have independently arisen several times in shell-bearing molluscs,

especially within the family Cardiidae where adoption of a photosymbiotic habit has evolved at

least six times (Vermeij 2013) including between the “giant clams” (formerly Tridacnidae

(Herrera et al. 2015)) and their algal symbionts.

Giant clams are the largest living bivalves and are found throughout the tropical Indo-Pacific,

where they live in close association with reef-building corals (Knop 1996). All described

tridacnid species (Othman et al. 2010; Huelsken et al. 2013), and two closely related species of

the genus Hippopus, exhibit symbiotic partnerships with Symbiodinium similar to those found in

reef-building corals. While corals host Symbiodinium in an intracellular compartment in

Symbiont photosynthesis in giant clams is promoted by host

H+-pumping. CHAPTER 1

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gastrodermal cells called the symbiosome (reviewed in (Tresguerres et al. 2017)), Symbiodinium

in giant clams are hosted extracellularly in modified extensions of the digestive system (termed

zooxanthellae tubules). These tubes extend upwards from the stomach into the light-exposed

tissue of the siphonal mantle where they are ultimately arranged roughly perpendicular to

incoming solar radiation (Fig. 1A) (Norton and Jones 1992; Knop 1996; Holt et al. 2014).

Though the physical arrangement of symbionts differs between scleractinian corals and giant

clams, the physiological benefits to the host are similar. Symbiont photosynthesis can provide

more reduced carbon than is required to meet respiratory demand in both coral (~150%)

(Muscatine et al. 1984) and Tridacna (up to 400%) (Klumpp and Griffith 1994). Furthermore,

Symbiodinium photosynthesis likely enhances rates of calcification in giant clams as has been

previously demonstrated in corals and several other photosymbiotic calcifiers (Vermeij 2013;

Tornabene et al. 2017). However, the cellular mechanisms regulating exchange of compounds

between giant clams and their partners remain largely unknown.

Regulation of symbiont physiology is essential for the success of the photosymbiosis.

Unregulated supply of light, inorganic carbon or nutrients to the photosymbiont can result in

algal overgrowth and strain on host resources (particularly nitrogen) (McConnaughey 2012;

Wooldridge 2013). In addition, mismatches between light and CO2 availability can increase the

generation of damaging reactive oxygen species (Wooldridge 2013) and both corals and giant

clams invest in metabolites which defend against photoinhibition and photostress (Hill et al.

2017). In extreme cases, regulatory failure can result in the expulsion of symbiotic algal

partners, a process known as bleaching. Although rarely fatal in giant clams, bleaching results in

significant decreases in hemolymph pH and glucose concentration and a loss in the clam’s ability

to assimilate ammonium from the environment which is a crucial physiological function in the

nitrogen-limited reef ecosystems giant clams inhabit (Leggat et al. 2003).

In corals, symbiont photosynthesis is strongly regulated by the cnidarian host through activity of

host vacuolar-type H+-ATPase (VHA) (Barott et al. 2015). VHA is an enzyme found in all

eukaryotes, and utilizes energy from ATP hydrolysis to transport H+ across biological

membranes (Stevens and Forgac 1997; Tresguerres 2016). The translocated H+ can be used to

energize the transport of other molecules and, if co-transported with an anion, can mediate acid

secretion (Wieczorek et al. 1999; Nelson and Harvey 1999; Tresguerres 2016). In coral, VHA

acidifies the symbiosomal compartment where Symbiodinium resides, which drives speciation of

inorganic carbon into CO2 (Barott et al. 2015). This carbon concentrating mechanism (CCM) is

essential because dinoflagellate RuBisCo, the terminal enzyme in carbon fixation, has low

affinity for CO2 (Rowan et al. 1996; Leggat et al. 2002). In coral, a reduction of VHA activity

reduces net photosynthetic oxygen production by 30-80%, showing that VHA-induced

acidification of the symbiosome promotes photosynthesis in scleractinian coral hosts (Barott et

al. 2015). However, the mechanisms underlying carbon transfer between host and symbionts in

giant clams remain unresolved.

In this study, we investigated whether VHA-mediated H+ transport is similarly used by tridacnid

clams to promote algal photosynthetic production in siphonal mantle tissue. We chose to address

these questions in the small giant clam, Tridacna maxima, which has one of the largest

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biogeographic ranges of any tridacnid species (Knop 1996) and has both ecological and

economic importance (Neo et al. 2015; Van Wynsberge et al. 2016).

METHODS

Organism acquisition and husbandry

For metabolic rate and VHA localization experiments, juvenile T. maxima clams (n = 18; shell

length 4.7 ± 0.4 cm, x̅ ± SD) were purchased from Oceans, Reefs & Aquariums® Aquaculture

company (Florida, USA) and held for acclimation in a 288 L, recirculating seawater

aquarium. Seawater was aerated and maintained at conditions approximating those of a tropical

coral reef (27.2 ± 0.4 °C, 34.6 ± 0.4 ppt, pH = 8.10 ± 0.04) and clams were exposed to a 2h dusk:

8h light: 4h dusk: 10h dark photocycle throughout acclimation. Mean irradiance during the light

cycle was 88.82 ± 1.08 234.65 ± 2.45 µEinsteins m-2 s-1. Clams were held for 25 days prior to

measurement of metabolic rates followed by tissue fixation. All clams were sampled during the

light cycle for metabolic rate and VHA localization experiments.

For VHA inhibition experiments involving concanamycin A, adult T. maxima (n = 4; shell

length 17.2 ± 6.0 cm) were collected from fringing reefs around the island of Mo’orea in the

Society Archipelago, French Polynesia during October 2015. For bafilomycin A1 experiments,

adult T. maxima clams (n = 3; shell length 15.0 ± 2.6 cm) were again collected from the same

fringing reef sites during October 2016. In both studies, clams were held for 14 days prior to use

in the experiment in an outdoor, flow-through seawater system, which drew water from the

adjacent fringing reef.

Antibodies and western blot analysis

Custom rabbit anti-VHA polyclonal antibodies recognize a conserved epitope in the VHAB

subunit, AREEVPGRRGFPGY. These antibodies specifically recognize VHAB by Western blot

and immunofluorescence in diverse taxa including scleractinian corals (Barott et al. 2015),

polychaete worms (Tresguerres et al. 2013), mussel (Thomsen, J., Himmerkus, N., Holland, N.,

Sartoris, F. J., Bleich, M. and Tresguerres 2016), hagfish (Clifford et al. 2015) and sharks (Roa et

al. 2014).

Juvenile T. maxima (n=3) were vivisected and sections of gill, siphonal and byssal mantle tissues

were frozen in liquid nitrogen and ground to a fine powder with a pestle in a ceramic mortar. 0.1

g of tissue was then combined with 500 µL of ice-cold S22 Buffer (450 mM NaCl, 10 mM KCL,

58 mM MgCl2, 10 mM CaCl2, 100 mM Hepes, pH 7.8) which contained a protease inhibitor

cocktail (Sigma) and phosphatase inhibitor mix PhosStop (Roche Applied Science) and

homogenized in a glass homogenizer. After a brief low-speed centrifugation to remove tissue

debris, Symbiodinium cells were pelleted by centrifugation at 500 g for 10 min at 4 °C. The

supernatant was then centrifuged again at 2100 g for 30 min (4 °C) and the “crude homogenate”

supernatant fraction was removed from pelleted membranes. Symbiodinium and membrane-

pellets were each resuspended in 100 µL of ice-cold homogenization buffer.

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Protein concentration was determined in triplicate by Bradford Assay (Bio-Rad, Hercules, CA,

USA). Western blotting was carried out following previously described methods (Roa et al.

2014). In brief, 5–25 μg of total protein were separated on polyacrylamide mini gel (60 V 15

min, 200 V 45 min) and transferred to a polyvinylidene difluoride (PVDF) membrane (Bio-Rad).

PVDF membranes were then incubated in blocking buffer (TBS-T with 5% non-fat powdered

milk) at room temperature for 1 h before incubation in the primary antibody (30 μg ml-1 in

blocking buffer) at 4 °C overnight. PVDF membranes were washed three times in TBS-T and

incubated in secondary antibody (1:10,000) at room temperature for 1 h. Bands were visualized

through addition of ECL Prime Western Blotting Detection Reagent (GE Healthcare, Waukesha,

WI, USA) and imaged and analyzed in a BioRad Universal III Hood using ImageQuant software

(BioRad). PVDF membranes incubated in blocking buffer with anti-VHA antibodies and 10-fold

excess blocking peptide served as control and did not show any bands.

Immunolocalization of VHA

For VHA to be playing an active role in regulating symbiont photosynthesis, we would predict it

to be localized to membranes of the zooxanthellae tubules surrounding Symbiodinium cells. We

utilized an immunohistochemical staining approach to test this predicted localization pattern in

sections of T. maxima siphonal mantle tissue containing symbiotic algae. Sections of tissue

roughly 1 cm x 1 cm x 0.5 cm thick were vivisected from juvenile clams (n=6) and placed on a

shaker plate in a petri dish containing 0.1M sodium cacodylate buffer with 3% paraformaldehyde

and 0.35% glutaraldehyde at 4 °C for 6 hours. Tissue was then transferred to 50% ethanol for 6

h, and finally stored in 70% ethanol until processed for immunohistochemistry. Tissues were

then serially dehydrated in 95% ethanol (10 min), 100% ethanol (10 min), and xylene (3 x 10

min) before being transferred to paraffin (55 °C, 3 x 10 min) and left to solidify overnight.

Paraffin-embedded tissues were sectioned at 12 µm using a rotary microtome and three

consecutive sections were placed on glass slides placed on a slide warmer (37 °C) overnight.

Paraffin was removed and sections were serially rehydrated in xylene (3 x 10 min), 100%

ethanol (10 min), 70% ethanol (10 min), and permeabilized in 0.2% triton-x TBS-T in phosphate

buffered saline (PBS) for 10 min. Tissue sections were blocked for 1 h in blocking buffer (0.2%

triton-x, 2% normal goat serum, and 0.02% keyhole limpet hemocyanin in phosphate buffered

saline, pH 7.8), and stained with the primary anti-VHAB antibody (3 µg mL-1 in blocking buffer)

overnight at 4 °C. Sections were washed three times in PBS, incubated with the secondary

antibody (1:500, goat anti-rabbit Alexa 555) for 1h at room temperature, and stained with

Hoescht 33342 (Invitrogen, Grand Island, NY, USA) at 5 µg mL-1 for 5 min to visualize host

nuclei. Controls were prepared as above except sections were incubated with anti-VHAB

antibodies and 1000-fold excess (mol:mol) blocking peptide.

Immunofluorescence was detected with an epifluorescence microscope (Zeiss AxioObserver Z1

and Zeiss Apotome2) under metal halide illumination with appropriate filters. Digital images

were adjusted for brightness and contrast only using Zeiss Axiovision software.

Oxygen consumption and production rates

All respirometric and photosynthetic measurements were conducted at 27 ± 1 °C using a stable

temperature water bath. Oxygen consumption rates were measured fluorometrically, in the dark,

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on freshly vivisected ~ 2 mm x 2 mm sections of siphonal mantle tissue immersed in seawater

containing 1% DMSO in sealed glass vials (750 uL volume) using a PreSens OxyDish Reader

(Loligo 1421-01). Controls were conducted with no tissue to correct for background oxygen

consumption in the media. Concentration of dissolved oxygen was measured every 10 s for 5

min and oxygen consumption over time was estimated by a linear regression of dissolved oxygen

concentrations, normalized by mass and corrected with no-tissue control blanks. For a subset of

tissue samples, oxygen consumption rates were also measured post-light-exposure to examine

phototrophic effects on holobiont metabolic rate. For these samples, tissues were prepared as

above, but were incubated in bright light supplied by a 28W fluorescent light source (Coralife

model 5300, 10K/420nm actinic bulbs) with tissue exposed to an average irradiance of 234.65 ±

2.45 µEinsteins m-2 s-1 as measured with a PAR scalar irradiance sensor (Biospherical

Instruments, Model QSL2101; x̅ ± SD) for 20 min prior to measuring dissolved oxygen

concentrations in the dark.

Inhibition of VHA activity was carried out using the specific inhibitors bafilomycin A1 and

concanamycin A as has been performed previously (Barott et al. 2015). The effects of

bafilomycin A1 on photosynthesis were assayed as described for metabolic rate above with slight

modifications. Tissue samples were arranged for maximal surface area illumination and were

incubated with 1% DMSO in open vials of seawater under constant illumination for 10 mins

before recording began at 30 s sampling intervals. Media was then replaced with either 1%

DMSO in seawater as a carrier control or a 1 µM solution of the VHA inhibitor bafilomycin A1

in 1% DMSO and tissues were allowed to incubate for 15 mins under the same initial conditions

before recording began again at 30 s sampling intervals for 10 min.

To measure the effect of concanamycin A on gross oxygen production rates in the field under

ambient tropical insolation, we used an end-point respirometric approach. Siphonal mantle

tissues from freshly vivisected adult clams (n = 4) were placed in 1.5 mL microcentrifuge tubes

and filled completely with either 1% DMSO in seawater or 1 µM concanamycin A1 in 1%

DMSO in seawater. Half of the samples were wrapped with aluminum foil to allow for

measurement of respiration rates, and no-tissue controls were used to correct for background

oxygen production as described previously. All samples were transferred to outdoor holding

tanks at 27 °C and experiments were performed under ambient solar irradiance (~14:00 – 15:30

h). Tissues in the photosynthetic treatments were continuously exposed to ~ 107,026.3 ±

21,604.1 Lux (~ 1,980 ± 400 µmol photons m-2 s-1; x̅ ± SD) as measured with a Mastech Digital

Lux Meter (MS6612) for 25 mins prior to measurement of end-point concentration. After 25

mins of exposure, microcentrifuge tubes were gently rocked to mix and samples of media were

quickly pipetted into the glass vials of the OxyDish reader which were immediately sealed.

Concentration of dissolved oxygen was measured for 3 mins in each vial and averaged to give

final end-point oxygen concentrations for each treatment. Gross oxygen production rates were

calculated as the mass-normalized rate of oxygen production in the light-exposed treatments plus

the mass-normalized oxygen consumption rates of the dark treatment for each tissue.

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RESULTS AND DISCUSSION

VHA is highly abundant in T. maxima siphonal mantle tubules

Western blot analyses revealed very high VHA abundance in siphonal mantle, and much lower

abundance in Symbiodinium and clam byssal mantle or gill (Fig. S1-3) where VHA may be

involved in hemolymph acid-base homeostasis and ammonia secretion as suggested in other

molluscs (Thomsen, J., Himmerkus, N., Holland, N., Sartoris, F. J., Bleich, M. and Tresguerres

2016). Immunofluorescence staining in siphonal mantle showed VHA is highly expressed in the

apical membrane of epithelial cells of gut-derived tubules containing Symbiodinium (Fig. 2).

The strong localization and high concentrations of VHA in tissues containing high

Symbiodinium levels suggests an active role of this class of proteins in regulating symbiont

photosynthesis.

Clam VHA promotes Symbiodinium photosynthesis

To study the potential role of VHA in promoting Symbiodinium photosynthesis, we

tested the effect of the specific inhibitors bafilomycin A1 and concanamycin A (Dröse and

Altendorf 1983) on net O2 production by isolated siphonal mantle tissue. Both VHA inhibitors

significantly reduced oxygen production compared to controls (Figs. 3 and 4), suggesting that

VHA actively promotes photosynthetic production in hosted Symbiodinium algae. In siphonal

mantle samples exposed to artificial illumination, bafilomycin A1 reduced gross oxygen

production by 28% (Student’s t-Test, P < 0.05; Fig. 3B). Because photosynthetic efficiency is

sensitive to light intensity (Falkowski and Raven 2007), we also tested the effects of inhibition of

VHA on siphonal mantle samples exposed to full ambient tropical insolation in order to estimate

photosynthetic productivity under conditions mimicking those on the reef. In these trials,

concanamycin A also reduced net oxygen production rates, in this case by 37% (Student’s t-Test,

P < 0.001; Fig. 4). These results demonstrate that, as in scleractinian corals, giant clam VHA

activity regulates symbiont photosynthesis, greatly increasing photosynthetic productivity.

The likely mechanism behind this increased productivity is increased supply of inorganic carbon

substrates for Symbiodinium photosynthesis, as has been suggested previously (Barott et al.

2015). In Symbiodinium, the fixation of inorganic carbon into organic forms is conducted

primarily by the enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) which

has a low affinity for CO2 as a substrate (Rowan et al. 1996). Thus, CO2 must be present at high

concentration to permit Symbiodinium photosynthesis (Rowan et al. 1996). This feature of

Symbiodinium necessitates the presence of a carbon-concentrating mechanism (CCM) within

host tissues in order to ensure adequate supply of carbon to the algae. We postulate that the

primary source of carbon fueling Symbiodinium photosynthesis is respiratory CO2 from the host

clam which, through the action of carbonic anhydrase, also serves as the likely source of H+ for

VHA activity (Fig. 1B).

Under this model of carbon supply, free H+ from metabolically formed and dissociated carbonic

acid (HCO3- + H+) could be actively transported across siphonal mantle cellular membranes by

VHA into the lumen of the zooxanthellae tubules (Fig. 1B). This acidification would in turn

generate an electromotive force facilitating concomitant transport of HCO3- into the

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zooxanthellae-filled tubules. Although the presence of these bicarbonate transporters is inferred

from the increased rate of carbon fixation within Symbiodinium in the presence of VHA, their

identity remains to be determined. Under the acidic conditions within the tubule lumen, host-

derived carbonic anhydrase could facilitate the conversion of HCO3- to CO2, which, through

diffusion, would increase the partial pressure of CO2 within zooxanthellae chloroplasts, thus

permitting efficient photosynthesis despite the low-affinity of Symbiodinium RuBisCO

(Tresguerres 2016). The resulting O2 freely diffuses back into the host clam tissue, where it fuels

an increased aerobic metabolic rate (as discussed below) further supplemented by reduced

carbons translocated from Symbiodinium. As in coral however, the mechanisms underlying

translocation of sugars from algae to host remain to be explored.

Upregulation of aerobic respiration rate in the light

Previous work has shown that the vast majority of sugars fixed by Symbiodinium are transferred

to the giant clam host where they are used to sustain metabolism and growth (Klumpp and

Griffith 1994; Klumpp and Lucas 1994). Here, we report that Symbiodinium photosynthetic

activity also enhances host aerobic respiration. Mass-normalized oxygen consumption rates of

siphonal mantle tissue biopsies measured at 27 °C in the dark were 0.022 ± 0.009 µmol O2 g-1

min-1 (x̅ ± SEM) in juvenile T. maxima (Fig. 5). This rate was indistinguishable from the rate of

0.022 ± 0.002 µmol O2 g-1 min-1 measured in the same tissue at the same temperature in samples

from field-acclimatized adults (Student’s t-Test, P > 0.05). However, oxygen consumption rates

dramatically increased to 0.107 ± 0.021 µmol O2 g-1 min-1 (x̅ ± SEM) in juveniles after 20

minutes of exposure to bright light (Fig. 5). These results demonstrate that light-driven symbiont

productivity fuels an increased aerobic metabolic rate in host clams and enhances holobiont

oxygen-consumption by nearly 490% (Fig. 5). To what degree this increased metabolic rate

stems from an increased supply of carbonate substrates for catabolism or an increased partial

pressure of O2 within the haemolymph and tissues remains to be explored. However, the rapid

rise in metabolic activity (occurring within just 20 min of exposure to light) suggests increased

availability of O2 within host tissues as the likely driver of increased metabolic rate rather than

translocated sugars.

Broader significance

We demonstrate that VHA-driven CCM enhances Symbiodinium photosynthetic productivity in

giant clams, and thus plays an important role in regulating holobiont energy availability. In

addition, VHA-driven transport of carbon from the host clam to algal symbionts plays a vital role

in maintaining acid-base balance within the host clam. Previous research has shown that in

symbiotically intact giant clams, zooxanthellae are capable of completely removing inorganic

carbon from the clam haemolymph and significantly increasing haemolymph pH (Rees et al.

1993). However, in bleached clams, concentration of inorganic carbon in the haemolymph can

rise above that of the surrounding seawater, resulting in significant tissue acidosis (Leggat et al.

2003). This suggests that not only does clam respiratory CO2 fuel Symbiodinium production, but

that without algal photosynthesis, giant clams are incapable of efficiently disposing of excess

inorganic carbon from their tissues (Leggat et al. 2003). VHA-driven CCM in the zooxanthellae

tubules likely facilitates this rapid drawdown of haemolymph pCO2 in tridacnid clams and could

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have important implications for how giant clams respond to increasing temperature and oceanic

pCO2 resulting from anthropogenic climate forcing.

By the end of the century, global temperature and oceanic pCO2 are predicted to rise by 4 ºC

(global warming) and > 500 ppm (ocean acidification) respectively, with adverse consequences

for many marine species (Watson et al. 2012; Watson 2015). Confronted with both direct

exposure to rising aqueous pCO2 and temperature-induced increases in metabolic CO2

production, marine organisms will likely face increasing inorganic carbon loads within their

tissues potentially compromising maintenance of acid-base balance (Gazeau et al. 2013).

However, VHA-driven CCM in giant clams permits the shuttling of inorganic carbon from

within host tissues to Symbiodinium, and thus may significantly ameliorate the effects of

environmentally-driven tissue acidosis. A recent investigation of the effects of elevated pCO2 on

giant clams provides evidence for this hypothesis. Watson (2015) demonstrated that, under

conditions of low ambient light, exposure to increased pCO2 congruent with predictions for the

year 2100 resulted in reduced growth rates and significant mortality among juvenile tridacnid

clams (Watson 2015). However, these negative effects were strongly counteracted (i.e. no

observed mortality and reduced effects on growth) when clams were exposed to high light

conditions demonstrating that Symbiodinium photosynthesis significantly altered host response

to acidification (Watson 2015). This strongly implies a positive role of algal photosynthesis in

removing excess carbon from host tissues with VHA CCM as the likely mechanism of carbon

transfer. Thus, VHA-driven CCM within giant clams likely acts as a physiological buffer against

acidification- and temperature-induced stress and may significantly ameliorate the negative

effects of these climate drivers on these species.

In addition to the important roles VHA may play in mitigating the negative effects of climate

change in tridacnid clams, we propose that the similar pattern of expression, localization, and

functionality of VHA within corals and giant clams, despite differing anatomies, serves as an

example of convergent exaptation across taxa which live symbiotically with Symbiodinium

algae. Both groups of organisms have utilized VHA to overcome physiological constraints to

photosynthesis, including the need for a CCM. In addition, the differential localization of VHA

at sites of calcification and photosynthesis in both corals and giant clams suggests that this one

class of protein has been repurposed for multiple, similar, physiological functions in both taxa.

Given the significant energetic benefits VHA activity has for the host coral and clam, we

interpret these findings as a clear example of convergent exaptation in marine photosymbioses.

Further research is necessary to discern whether VHA ultimately acts to transport H+ from sites

of calcification to symbiotic algae in both corals and tridacnid clams, but our results conclusively

demonstrate that both taxa utilize VHA to enhance carbon fixation.

Despite meticulous early research efforts which quantified the surpassingly large contribution of

dinoflagellate symbionts to their hosts daily metabolic needs (Klumpp and Griffith 1994), the

question still remains, what is the ultimate fate of this “excess” fixed carbon? In scleractinian

corals, as much as half of the carbon gained from zooxanthellate symbionts is estimated to be

lost to the environment in the form of mucus which is excreted nearly continuously by the

cnidarian host (Crossland et al. 1980; Edmunds and Davies 1986; Leletkin 2000). Whereas giant

clams also produce copious amounts of mucus, the majority is utilized in particulate matter

capture at the gills and in transport of ingested material in the digestive tract and thus is likely

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quickly resorbed by the host clam (Urrutia et al. 2001). The major loss of mucus to the

environment in bivalves occurs in the production of pseudofeces (Urrutia et al. 2001). However,

the volume of mucus lost from clams in pseudofeces is significantly less than that loss in the

mucus sheets of corals and likely represents a negligible component of the global energy budget

in bivalves (Urrutia et al. 2001). With no other obvious sink for excess fixed carbon, we

speculate that the majority of surplus photosynthates are directed towards massive growth (i.e.

the phenomenon of gigantism) within giant clams.

Gigantism has frequently arisen from symbiotic associations between animals and chemo- or

phototrophic microbes or algae (Childress and Girguis 2011; Vermeij 2013, 2016). The prevailing

hypothesis is that adoption of a symbiotic partnership benefits hosts through an increased energy

supply for growth, augmenting food availability through symbiont chemo/photosynthetic

production (Vermeij 2016). We provide supporting evidence for that hypothesis here and show

that in T. maxima symbiont photosynthetic production greatly alters host metabolic rate,

substantially increasing energy turnover (Fig. 5). Whereas the first chemosymbiotic bivalves were

small (mytilids of the Late Eocene, < 50 mm shell length), we hypothesize that adoption of a

photosymbiotic lifestyle in the tridacnid lineage ultimately served as an enabling feature permitting

the evolution of gigantism in this group (Vermeij 2016).

CONCLUSION

In this study, we demonstrate that giant clams of the genus Tridacna regulate and promote

symbiont photosynthesis through the activity of vacuolar-type H+-ATPase. We confirm that

giant clam VHA is expressed predominantly in siphonal mantle in T. maxima where it is

localized in close proximity to symbiotic zooxanthellae. We demonstrate that VHA actively

promotes algal photosynthesis, increasing rates of O2 production by 37% and that photosynthetic

activity increases holobiont metabolic rate by as much as 490%. Taken together, these results

suggest that localization and activity of VHA within siphonal mantle of giant clams constitutes

an exaptation in the tridacnid lineage, convergently shared by reef-building corals, which confers

strong, positive energetic benefits to the host and may have permitted the evolution of gigantism

within this group of bivalves.

ACKNOWLEDGEMENTS

We are grateful to Yuzo Yanagitsuru for help with Western blots and to Camilla Souto for help

in collecting specimens of T. maxima in the field. E.A. designed this study, collected specimens

and generated most data. E.A. and M.T. composed this paper. E.A., J.R. and M.T. carried out

the analysis of VHA. J.S. and M.T. advised on experimental design and interpretation. All

authors critically read and edited the manuscript.

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FIGURE CAPTIONS

Figure 1. Histological diagrams of Tridacna maxima siphonal mantle tissue and symbiont

arrangement. (A) T. maxima siphonal mantle ultrastructure showing approximate arrangement

of mantle margin cells (M) relative to light-refractive irridocytes (I), zooxanthellae tubules (ZT)

and Symbiodinium (S). Anti-VHAB staining in apical margins of siphonal mantle cells is shown

in green, and dotted line (*) denotes cross section of zooxanthellae tubule displayed in (B). (B)

Model of zooxanthellae tubule system in T. maxima as compared to endosymbiotic arrangement

in corals. In giant clams, Symbiodinium are hosted extracellularly in digestive tubules (ZT)

bounded by host clam cells (blue) that express VHA in apical membranes (green). In corals,

algae are housed intracellularly in a membrane-bound symbiosome (SB) containing VHA. In

both taxa, metabolic CO2 is converted by host carbonic anhydrase (CA) to H+ and HCO3- (1).

H+ is then actively transported into the tubule lumen by clam VHA (green/yellow icon; 2).

HCO3- follows via an unknown bicarbonate transport mechanism (grey circle; 3), whereupon

putative host-derived CA catalyzes the reconversion of both substrates into CO2 (4). CO2

diffuses into Symbiodinium cells (5) where it is transported by unknown mechanisms to algal

chloroplasts. Algal photosynthesis drives the production of O2, which diffuses into host tissues,

and sugars (6) which are translocated by unknown mechanisms to the host clam.

Figure 2. Immunolocalization of vacuolar-type H+-ATPase in tissues of the giant clam T.

maxima. Negative control omission of primary antibody (A) in siphonal mantle, and

corresponding anti-VHAB antibody staining in byssal (B) and siphonal mantle (C). High

magnification image of the zooxanthellae tubule system shown in (D). VHA in green, nuclear

DAPI staining in blue, and chlorophyll autofluorescence in red. ZT, zooxanthellae tubules; M,

shell-mantle margin.

Figure 3. Effects of VHA-inhibition by bafilomycin A1 on net photosynthetic oxygen

production in T. maxima. Representative oxygen production traces from T. maxima before and

after addition of (A) DMSO and (B) 1 µM bafilomycin A1. Breaks in data correspond to pauses

in data acquisition for treatment addition and dotted lines indicate initial photosynthetic

production trajectories. (B) Relative net oxygen production rates in the presence of DMSO or

concanamycin A. Data are plotted as mean rates with SEM and asterisk denotes significant

difference from control.

Figure 4. Effects of VHA-inhibition by concanamycin A on net photosynthetic oxygen

production in T. maxima. Displayed data are net oxygen production rates in the presence of

DMSO or concanamycin A relative to average DMSO control. Data are plotted as mean rates

with SEM and asterisk denotes significant difference from control.

Figure 5. Light-induced alteration of metabolic performance in T. maxima. Rates of oxygen

consumption in the dark in tissue incubated in DMSO either in the absence of light (dark) or

after 20 minutes of exposure to light. Data are plotted as mean rates with SEM and asterisk

denotes significant difference between treatments.

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FIGURES

Figure 1.

A B

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Figure 2.

C D

A B

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Figure 3.

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Figure 4.

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Figure 5.

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APPENDICES

Appendix A.1 – Supplemental Figure Captions

Figure S1. Western blots for total protein in (A) crude homogenates of T. maxima tissue and

(C) Symbiodinium and siphonal mantle membrane fractions (with 5-25 µg protein loaded) using

anti-VHAB antibodies and (C) control using anti-VHAB antibodies incubated overnight with 10-

fold antigen peptide. SM, siphonal mantle; BM, byssal mantle; G, gill; Z, zooxanthellae; M,

siphonal mantle membrane.

Figure S2. Western blots for total protein in (A) Symbiodinium and (B) siphonal mantle

membrane fractions using anti-VHAB antibodies and (C) control using anti-VHAB antibodies

incubated overnight with 10-fold antigen peptide. Z, zooxanthellae; M, siphonal mantle

membrane.

Figure S3. Immunofluorescent staining for vacuolar-type H+-ATPase in T. maxima gill tissue.

VHA in green, nuclear DAPI staining in blue, and chlorophyll autofluorescence in red. ZT,

zooxanthellae tubules; M, shell-mantle margin

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Figure S1.

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Figure S2.

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Figure S3.

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Eric J. Armstrong

ABSTRACT

Elevated temperature and decreased oceanic pH (ocean acidification) associated with

anthropogenic climate change are known to adversely affect fertilization success and

development in marine invertebrates. However, estimates of these impacts remain unresolved

for many ecologically and economically important species including giant clams of the genus

Tridacna. I investigated the individual and interactive effects of warming and acidification on

fertilization (successful first cellular cleavage) in the economically important bivalve mollusc,

Tridacna maxima in Mo’orea, French Polynesia. Fertilization was conducted under ambient

conditions (27 °C, pH 8.1) and under temperature and pH conditions projected for the coming

century (31 °C, pH 7.6). Fertilization success was low under ambient conditions (48.4 ± 3.0%)

and was significantly reduced under elevated temperature, alone and in combination with high

pCO2 (18.8 ± 4.3 % and 16.4 ± 4.0% respectively). However, acidification alone had no effect

on fertilization success in T. maxima (47.5 ± 2.9%). Fertilization in T. maxima was resilient to

reduced pH, but was strongly inhibited by elevated temperature. Populations of T. maxima may

therefore be at risk of low reproductive success over the coming century as a result of rising

oceanic temperature.

INTRODUCTION

Elevated oceanic temperatures (ocean warming) and reduced oceanic pH (ocean acidification)

are products of increasing atmospheric pCO2 and have been shown in many taxa to alter

developmental timelines (Stumpp et al. 2011), inhibit growth (Stumpp et al. 2011; Dorey et al.

2013), deform calcitic exoskeletons (Gazeau et al. 2013), and reduce larval fitness (Kroeker et al.

2010). However, the magnitude of these effects can vary significantly both across taxa (Kroeker

et al. 2010; Harvey et al. 2013) and across life history stages within a species (Kurihara 2008;

Harvey et al. 2013).

Early life history stages are often more susceptible to acute changes in the environment than

juveniles or adults and require a narrower range of conditions to complete their development

(Kurihara 2008; Byrne and Przeslawski 2013). Mortality in such stages of broadcast spawning

organisms can be extremely high (> 90%) even under ambient natural conditions (Kurihara

2008) and thus sensitive early life history stages may represent important bottlenecks for

Elevated temperature, but not acidification, reduces fertilization

success in the small giant clam, Tridacna maxima. CHAPTER 2

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population growth and persistence under a changing climate (Byrne & Przeslawski 2013).

Recent studies have repeatedly demonstrated heightened sensitivity of early developmental

stages of marine organisms to several environmental drivers including increased temperature and

reduced pH (Kurihara 2008). However, for many species, we lack data regarding physiological

sensitivity of early life stages to these potential stressors. Among these understudied taxa are the

so-called giant clams of the genus Tridacna, which are among the most charismatic inhabitants

of tropical coral reefs and are important both culturally and economically throughout their range

(Neo et al. 2015).

Giant clams are highly fecund, seasonal broadcast spawners that inhabit tropical Indo-Pacific

reefs (Knop 1996) and are harvested both locally and commercially for the seafood and

ornamental markets (Firdausy and Tisdell 1992). Giant clams are protandric hermaphrodites that

release their gametes sequentially, first spawning sperm first with egg release occurring several

minutes afterwards (Wada 1952, 1954). This reproductive behavior is uncommon among

hermaphroditic bivalves, including most other cockles, which generally discharge both sperm

and eggs simultaneously (Soo and Todd 2014). In addition, populations of giant clams exhibit

synchronized spawning across wide stretches of reef habitat, but reproductive cues in giant clams

remain unresolved (Soo and Todd 2014). Seasonal and episodic periods of decreased

temperature (often associated with increased flow across lagoonal reefs) have been implicated as

initiators of spawning in some populations (Van Wynsberge et al. 2016). Gamete release is also

exceptional in giant clams and several million gametes are released in one reproductive event

earning giant clams the moniker of “pinnacle of fecundity in the animal kingdom” (Yamaguchi

1977; Lucas 1994). Despite this prolific reproductive output, however, the fertilization window

in giant clams is relatively limited and gametes are only viable for 4–6 h after release (Tan and

Yasin 2001). Furthermore, coral reef habitats, the settlement site for larval giant clams, are

currently experiencing swift changes in abiotic conditions including unprecedentedly rapid rises

in temperature (Hoegh-Guldberg 1999), with severe negative consequences for foundational

species including corals themselves (Hoegh-Guldberg, 1999; Anthony et al., 2008; Marshall &

Baird, 2009; De’ath et al., 2012) and, potentially, giant clams (Watson et al., 2012).

While much has been learned about early development of giants clams in mariculture (Beckvar

1981; Crawford et al. 1986; Lucas 1994; Toonen et al. 2011), no studies have directly examined

the sensitivity of giant clam syngamy success, or eff fertilization, to predicted warming and

acidification associated with global climate change. Because giant clams are relatively scarce,

long-lived, and slow to mature, they may exhibit limited capacity for adaptation to the rapid

environmental changes associated with anthropogenic forcing and may thus be particularly

vulnerable to the effects of ocean warming and acidification. With global temperature expected

to rise by +4 ºC and average pH of the Indo-Pacific reefs expected to decrease 0.5 units (to ca.

7.7) by the end of the century (IPCC, 2014; IOC, SCOR, and IGBP 2013), there is a strong need

to examine the physiological effects of these changes on early development in giant clams.

Here, I present the first data documenting responses to these drivers in early life history stages of

a giant clam, the economically and ecologically important “small” giant clam, Tridacna maxima

(Röding, 1798).

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METHODS

Broodstock Acquisition and Maintenance

Eight adult broodstock Tridacna maxima clams, shell length 12.2 ± 2 cm, were collected from

areas of fringing reef around the islands of Mo’orea and Tahiti, French Polynesia during

September and October 2016. Broodstock clams were immediately transferred to an onshore

holding tank (~ 380 L) at the University of California, Berkeley, Richard B. Gump Field Station

where they were maintained under flow-through seawater conditions (26.9 ± 1°C, 35.96 ± 0.2

PSU, pH = 8.44 ± 0.01) and ambient insolation for at least 2 days prior to use in the spawning

experiment.

Spawning Induction

Because not all individuals released both eggs and sperm, spawning was carried out in four

rounds in which gametes from two broodstock clams were crossed in one direction (i.e. one

nominal “mother” per round). In each spawning there were two clams; one clam was used for

eggs and the other clam was used for sperm. Four spawnings were conducted at intervals of

approximately 3 days yielding a total of n=4 biological replicates. Spawning was induced in

each clam by injection of serotonin (5-hydroxytryptamine creatine sulfate complex (Sigma-

Aldrich CAS 153-98-0; prepared as 0.5 mL of 1 mM serotonin in 2 µm-filtered seawater)

directly into the gonad (Crawford et al. 1986). Clams were placed in separate 1.5 L spawning

tanks where they released sperm. Concentrated sperm stock was collected from one clam (i.e.

nominal “father”) using a 50 mL syringe positioned above the exhalant siphon. After sperm

production had ceased, clams were then transferred to new 1.5 L egg collection tanks and

allowed to continue gamete release until spent and eggs were collected from another individual

(i.e. nominal “mother”).

Fertilization and Zygote Culture

For each nominal mother (n = 4), one 50 mL sample of egg stock was aliquoted prior to

fertilization and stored for quantification of egg density. Eggs were counted and imaged from

ten, 0.1 mL aliquots of each stock solution using a Leica® dissecting microscope with optical

light microscope camera (Leica MZ16; Leica DFC420). Images were also taken of eggs

alongside scale references, and egg diameter was measured using the image analysis program

ImageJ64 (Schneider et al. 2012).

Culture water for fertilization was collected from offshore, and filtered through a 75 µm mesh

before being delivered to four 80 L header tanks at a rate of ca. 50 L hr-1. Parameters in header

tanks were maintained following a 2x2 temperature (28 ± 1°C modern ambient, 31 ± 2°C

predicted future) by pH (7.6 ± 0.06 and 8.1 ± 0.04) design. Elevated temperature was achieved

using 250 W aquarium heaters and high pCO2 conditions were maintained as described in the

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Seawater Acidification section below. A full list of experimental seawater parameters is given in

Table 1.

Fertilization took place under treatment conditions. Eggs were washed twice with treatment

water before twelve, 50 mL aliquots of egg stock solution were transferred to individual 50 mL

Falcon tubes modified with cap-mounted driplines and 75-µm mesh covered bottoms, permitting

flow-through culturing, hereafter referred to as culture tubes. For each paternal/maternal pair,

three replicate culture tubes (technical replicates) were used for each of the four temperature x

pH treatments. Culture tubes were placed in separate 1.7 L water baths containing respective

treatment water. Fertilization was initiated by the addition of 1 mL of well-mixed, concentrated

sperm stock from the paternal clam and tubes were sealed allowing fertilization to take place

under treatment conditions. Culture water was delivered from header tanks via cap-mounted

driplines (7.6 L hr-1 flow rate) to the culture tubes. Tubes were continuously immersed and kept

in a semi-shaded location outdoors. Embryos (which were larger than tube mesh coverings and

therefore retained) were maintained in the flow-through culture tubes for 2-hours prior to

estimation of fertilization success.

Assessment of Fertilization Success

Fertilization success was measured as the number of zygotes that had successfully

undergone cleavage to the 2-cell stage 2 h post-fertilization. To count successfully dividing

embryos, inflow from header tanks was stopped and culture tubes were gently agitated in their

respective water baths to re-suspend eggs. Three, 1 mL aliquots were taken from each culture

tube and transferred to separate microcentrifuge tubes from which three subsequent 100 µL

subsamples were counted. This resulted in a total of nine replicate counts for each culture tube

and 36 counts per temperature x pH treatment x spawning pair. Aliquots were placed on a glass

microscope slide for visual inspection of embryos. All embryos within a 100 µL aliquot were

counted and the proportion of embryos which had successfully undergone first cellular-cleavage

was recorded.

Statistical Analyses

Data were analyzed using the statistical software program R (v 3.2.5; R Development Core

Team, 2008). Normality of data was checked using the shapiro.test and test_normality functions

of the “stats” and “LambertW” packages. Fertilization success data were not normally distributed

as a result of the low fertilization success recorded in pairing 2. While removal of pairing 2 data

did cause remaining data to meet normality criteria, it did not alter the results of statistical

analyses (i.e. significant factors remained unchanged). Thus, all response variables were

analyzed using a linear mixed effects model, including all interaction terms, with pH,

temperature, and pairing (maternal/paternal pair) as fixed effects and culture tube as a random

effect (DF =98). Results of this analysis are given in Table 2.

Seawater Acidification and Carbonate Chemistry

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28

Elevated pCO2 treatments were maintained by controlled bubbling of 80 L header tanks

with pure CO2 using an IKS Aquastar pH controller and solenoid-valve gas regulation system

(CO2 Art). Seawater pHT and salinity were measured every 15 minutes using a Professional Plus

Multiparameter Instrument (YSI Quatro Dual, Model 1001 pH sensor) calibrated with four,

spectrophotometrically determined, pH samples. Calibration standards were measured using m-

Cresol Purple sodium salt dye using an Evolution 60S UV-Visible spectrophotometer against a

Tris-buffered pH reference standard (Dickson Strand 13/Bottle 74) following modified best

practice methods (Dickson et al. 2007). Seawater temperature was recorded using Thermochron

iButton data loggers (± 0.5 °C resolution; model DS192G-F5#; iButton Link Technology).

Samples for determination of total alkalinity (AT) were taken immediately prior to fertilization

and were measured via open-cell potentiometric titration with an automatic titrator (T50,

Mettler-Toledo). Measurements of AT were conducted on duplicate 50 mL samples at room

temperature (~23 °C) and AT was calculated as described previously (Dickson et al. 2007).

Titrations of certified reference materials (CRM) provided by A. G. Dickson (Dickson Batch

13/Bottle 74) yielded AT values within ± 4 mol kg-1 of the nominal value (n = 8). Parameters of

the seawater carbonate system were calculated from salinity, temperature, AT and pHT using the

R package seacarb (Table 1; Gattuso et al. 2015).

RESULTS

Reproductive Output and Morphology

Average reproductive output was estimated at 435,000 ± 58,000 (x̅ ± se) eggs ind.-1. Egg cells

were 47.4 ± 2.1 µm in diameter (x̅ ± sd) while jelly coats were ca. 16.4 ± 2.1 µm thick giving

eggs a total diameter of ca. 84.0 ± 1.2 µm. The vast majority of eggs were well-formed and

possessed complete jelly coats (Fig. 1).

Fertilization Success

Under ambient conditions, fertilization success in T. maxima embryos was 48.4 ± 3.0 % (x̅ ±

95%-ci; Fig. 2). Acidification did not affect fertilization success, as 47.5 ± 2.9% of eggs were

fertilized under reduced pH conditions (Table 2). However, exposure to elevated temperature

(either alone or in combination with reduced pH) resulted in ca. 30% decrease in fertilization

success relative to the ambient conditions (18.8 ± 4.3 % and 16.4 ± 4.0 % respectively; Fig. 2;

Table 2). There was no significant interactive effect between elevated temperature and high

pCO2 or between high pCO2 and pairing (individual male/female pairs) on fertilization success in

T. maxima (Table 2). However, there was a significant interactive effect between temperature

and pairing (Table 2) with one female exhibiting an extreme negative response to elevated

temperature (i.e. 0% fertilization success, Fig. 3).

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29

DISCUSSION

In this study, I assessed the effects of elevated temperature and high pCO2 concentrations on

early development in the giant clam Tridacna maxima. My data are the first to show that

fertilization success in a species of giant clam is negatively impacted by climate change drivers.

Exposure to elevated temperature, alone or in combination with elevated pCO2 resulted in a ca.

66% decrease in successful fertilization (i.e. fertilization rate of 17%; Fig. 2). This sensitivity of

reproductive success to elevated temperature is likely to result significant negative consequences

for persistence of giant clam populations under future ocean warming.

Sensitivity to Warming

The demonstrated sensitivity of fertilization success in giant clams to increased temperature

stands in stark contrast to responses reported for other broadcast spawning organisms (e.g.

corals, polychaetes, echinoderms) including several other species of bivalve molluscs

(Crassostrea gigas, Mytilus galloprovinciallis, Saccostra glomerata, and Spisula solidissima)

(Byrne 2011b) . In these species, high rates of fertilization were achieved over a broad range of

ambient temperatures including warming scenarios far in excess of predicted future ocean

conditions (up to + 6ºC; M Byrne, 2011). In general, increased temperature reduces seawater

viscosity, increases sperm metabolism and swimming speed, and facilitates the acrosome

reaction, all of which have been shown to aid fertilization success in marine organisms

(Kupriyanova, E.K. Havenhand 2005). In giant clams however, even the +3 ºC warming applied

in this study was enough to significantly reduce fertilization success (Fig. 2). This is surprising

given the routine use of heat shock (often conducted at temperatures of + 6 °C above ambient) to

obtain fertile gametes in giant clams (ACIAR 1992). However, after gametes have been

spawned and collected, fertilization of giant clam eggs in aquaculture settings is universally

conducted at ambient temperature, which may explain the success of this technique in generating

healthy larvae despite exposure of adult clams to temperatures far in excess of those applied in

this study. Furthermore, in the wild natural spawning in several populations has been linked to

periods of decreased ambient temperatures (Van Wynsberge et al. 2016) suggesting that

populations may have evolved temperature-responsive gamete release strategies to avoid

exposing gametes to periods of increased temperature and thus maximize fertilization success.

However, decreases in ambient temperature are by no means a universal spawning cue among

giant clams (LaBarbera 1975; Jameson 1976; Beckvar 1981) and, despite considerable research,

no consensus has yet been reached regarding initiation of reproduction in Tridacnid species (Soo

and Todd 2014). Further research is certainly warranted to address the extreme temperature-

sensitivity of giant clam fertilization, especially in light of both the natural history of

reproductive timing in these species and the relative resilience of this response variable among

many other bivalve molluscs (Byrne 2011b).

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Resilience to Acidification

In contrast to giant clam’s demonstrated temperature-sensitivity, the relative insensitivity of giant

clam fertilization to acidification is equally surprising. Reductions in ambient pH have been

previously shown to negatively impact fertilization success in marine invertebrates, most notably

in echinoderms where the process has been extensively studied (Kurihara and Shirayama 2004;

Byrne et al. 2009). The mechanisms underlying this reduced fertilization success vary, but many

result from direct negative effects of increased pCO2 on sperm performance. For example,

hypercapnia has been shown to reduce sperm swimming speed and thus impair fertilization

(Havenhand et al. 2008; Morita et al. 2010), but the strength of this impairment differs across

species. For example, in the sea urchin, Strongylocentrotus purpuratus, Christen et al. (1983)

observed that low pH impaired sperm motility, but this was not similarly observed in either of

two other species, Hemicentrotus pulcherrimus and Echinometra mathaei (Kurihara and

Shirayama 2004). In addition, Gregg & Metz (1976) indicated that low pH (6.5) inhibited the

acrosomal reaction of sea urchin sperm in Arbacia punctulata, whereas in Anthocidaris

crassipina, polyspermy was induced when eggs were fertilized at pH 7.0 and lower (Kobayashi

1973). While the mechanisms by which hypercapnia affects fertilization may vary, lowered pH

certainly has demonstrated potential to reduce fertilization success in marine species.

However, despite these potential negative effects of hypercapnia on sperm swimming

performance and egg-recognition, a relatively large number of acidification studies (17 across

four phyla including several bivalve species and giant clams from this study) have demonstrated

that fertilization is robust to pH as low as 7.4–7.6, values significantly lower than those projected

for much of the ocean by the end of the century (Byrne 2011b). Byrne et al. have suggested that

this resilience may reflect adaptation to environments in which pH is naturally highly variable

(e.g. the intertidal or shallow subtidal zones; M Byrne, 2011). For example, comparison between

two congeneric sea urchins demonstrated that, in the intertidal species, Heliocidaris

erythrogramma, successful fertilization occurred under pH as low as 7.6 whereas in the subtidal

congener, Heliocidaris tuberculata, fertilization was significantly impeded under similar pH

conditions (Byrne et al. 2010). While the relative resilience of giant clam fertilization to reduced

pH could potentially be explained, at least in part, by the relatively high, and consistent, daily

variation in pH experienced on tropical coral reefs (as high as ± 0.3 units; Hofmann et al., 2011),

not all reef-dwelling species are similarly robust. For example, in the tropical coral Acropora

palmata, fertilization success under control pH conditions was similar to that observed in T.

maxima (50% in A. palmata as compared to 48% in T. maxima), but fertilization was reduced by

ca. 60% (i.e., 30% fertilization success) at pH 7.7 in the coral species (Albright et al. 2010). This

suggests that exposure to natural pH variability alone may not explain the relative insensitivity of

giant clam fertilization to acidification. More data from a greater diversity of species are needed

to adequately address hypotheses regarding potential environmentally-driven low-pH adaptation

of fertilization and to elucidate the mechanisms underlying this resilience.

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CONCLUSION

While the robust nature of giant clam fertilization to predicted future ocean pH is encouraging,

the strong susceptibility of this process to warming leaves open the possibility of severe negative

population responses to ocean warming. Even under ambient conditions, survival in Tridacnid

early life history stages is generally low, with reports of > 99% mortality over the course of

development from zygote to juvenile metamorphosis (Beckvar 1981; Crawford et al. 1986).

While not uncommon for highly fecund broadcast spawners, this low viability further highlights

the potential of early-life history stages as “weak links” in giant clam population persistence.

With populations of giant clams already severely overharvested over much of their range (Van

Wynsberge et al. 2016), the additional impact of low fertilization success is likely to exacerbate

population declines.

Restoration efforts are currently underway to utilize mariculture to restock giant clam

populations on overexploited reefs (Neo and Todd 2013; Neo et al. 2013), but these efforts may

ultimately be hampered by warming-induced infertility. In a recent study of the potential role of

mariculture in reestablishing giant clam populations on the heavily exploited reefs of Singapore,

captive-raised giant clams were successfully reestablished on highly impacted reefs sites, but no

juveniles or recruits were ever found subsequently at restoration sites despite thousands of hours

of surveying (Guest et al. 2008; Neo et al. 2013). This implies that successful larval recruitment

from these captive-raised clams was virtually non-existent on Singapore’s reefs and represents a

severe hurdle to the use of restocking alone as a means of reestablishing self-sustaining

populations of giant clams on overexploited reefs (Guest et al. 2008). Larval recruitment failure

could be a persistent problem if temperature-sensitive genotypes (as displayed in pairing 2 in this

study; Fig. 3) are relatively common among wild populations of T. maxima. Given the extreme

negative effects of even moderate warming on fertilization success in giant clams as

demonstrated here, mariculture restoration efforts may ultimately be constrained by temperature

sensitivity of syngamy in Tridacnid species.

ACKNOWLEDGEMENTS

I would like to thank Vaimiti Dubousquet for her tireless efforts in helping to both secure and

spawn the clams utilized in this study. Thanks too to Antoine Puisay and Benoît Lemarechal, for

help in collecting mature broodstock clams, and to Franck Lerouvreur, Pascale Ung, and

Valentine Brotherson for their invaluable aid in construction and maintenance of the aquarium

facilities and in securing CO2 for use in this study. This research was conducted with US

Government support to EJ Armstrong under and awarded by the Department of Defense, Air

Force Office of Scientific Research, National Defense Science and Engineering Graduate

(NDSEG) Fellowship, 32 CFR 168a.

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32

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TABLES

Table 1. Measured and calculated seawater carbonate chemistry parameters. All parameters

were calculated from salinity, temperature, total alkalinity (AT) and pH (total scale) using the

carb() function of the R package seacarb (Gattuso et al. 2015).

Variable Ambient pCO2

Mean ± SD

High pCO2

Mean ± SD

Measured

pH

8.02 ± 0.04

8.00 ± 0.10 (High T)

7.63 ± 0.06

7.61 ± 0.11 (High T)

Temp

(°C)

27.08 ± 0.8

31.14 ± 2 (High T)

27.08 ± 0.8

31.14 ± 2 (High)

Salinity

36.0 ± 0.4

36.4 ± 0.72 (High T)

36.3 ± 0.44

36.6 ± 0.67 (High T)

AT

(μmol Kg-)

2359.2 ± 83

2361.3 ± 93 (High T)

2344.6 ± 97

2352.7 ± 104 (High T)

Calculated1

pCO2

(μatm)

432.5

450.7 (High T)

2023.4

2154.1 (High T)

DIC

(μmol Kg-)

2043.05

2016.05 (High T)

2297.08

2293.05 (High T)

HCO3 –

(μmol Kg-)

1805.77

1759.76 (High T)

2172.77

2162.92 (High T)

CO3 2–

(μmol Kg-)

225.71

245.34 (High T)

70.28

77.85 (High T)

Ω Aragonite

3.59

3.98 (High T)

1.12

1.26 (High T)

Ω Calcite 5.41

5.90 (High T)

1.68

1.87 (High T)

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38

Table 2. Results of statistical analyses. All response variables were analyzed using a linear

mixed effects model, including all interaction terms, with pH, temperature, and pairing

(maternal/paternal pair) as fixed effects and culture tube as a random effect (DF =98).

Significant effects (P < 0.05) shown with an *.

Variable Value Std Error t-Value P

Temperature -37.51 11.76 -3.19 0.00*

pH -7.90 11.76 -0.67 0.50

Pairing -10.08 3.12 -3.23 0.00*

Temp:pH 1.85 16.62 0.11 0.91

Temp:Pairing 3.61 4.41 0.82 0.41

pH:Pairing 3.57 4.41 0.81 0.42

Temp:pH:Pairing -2.09 6.23 -0.34 0.74

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39

FIGURE CAPTIONS

Figure 1. Unfertilized Tridacna maxima eggs. Image of newly spawned, unfertilized, T.

maxima eggs showing jelly coat surrounding cell cytoplasm.

Figure 2. Elevated temperature reduces Tridacna maxima fertilization success. Mean

fertilization success (± 95%-CI, error bars) in T. maxima under stressor conditions (Acidified,

pH 7.6; High Temp, 31°C; or Multistressor, pH 7.6, 31°C) relative to that of the control group

(pH 8.1, 27°C). Mean fertilization success of the control is given in the upper right (shaded

region denotes 95%-ci). Letters indicate significant differences between means.

Figure 3. Some individuals were particularly sensitive to elevated temperature. Mean

fertilization success (± 95%-CI, error bars) in Tridacna maxima under ambient (27°C, open

circles) or elevated temperature (31°C, filled circles) plotted against experimental pH conditions

(acidified, pH 7.6; or ambient pH 8.1). Letters indicate significant differences between means.

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FIGURES

Figure 1.

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41

Figure 2.

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Figure 3.

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Eric J. Armstrong

ABSTRACT

Overexploitation of coral reef communities is of growing concern globally. No-take marine

reserves are increasingly employed as tools to protect biodiversity and facilitate recovery of

exploited populations. In response to declining stocks, the island of Mo’orea, French Polynesia,

established a series of eight no-take marine reserves in 2004. Those reserves, the Plan de

Gestion de l’Espace Maritime network (PGEM), cover 20% of the island’s fringing reefs. The

PGEM was intended to promote recovery of several exploited species, including the threatened

giant clam, Tridacna maxima. T. maxima is an economically important species in French

Polynesia where it displays conspicuous color morphs that are easily seen by fishers and that are

valuable in the aquarium market, and may therefore be particularly subject to overharvesting. I

conducted a total of 30 surveys covering 2250 m-2 of reef to assess collection-driven alterations

of population demography and state of recovery of T. maxima within the Mo’orea PGEM.

Despite minimal external enforcement of regulations, clam abundance has increased nearly 3-

fold in the PGEM while remaining unchanged outside the reserve. Giant clams were 6x more

abundant in protected sites than non-protected controls and densities of mature and

conspicuously-colored T. maxima clams were 12x and 4x greater within the PGEM,

respectively. These population increases are 1.7x higher than the average reported for other

marine reserves globally, and have likely been positively influenced by social factors including

traditional Polynesian conservation practices. These results indicate that the PGEM network of

Mo’orea is an effective and viable solution for promoting recovery of a threatened giant clam.

INTRODUCTION

Coral reef ecosystems are some of the most diverse habitats on earth and are of major importance

to many island communities where they support the development of local and national

economies (Dalzell et al. 1996; Moberg and Folke 1999; Ferraris and Cayré 2003; Kronen et al.

2010; Pickering et al. 2011). Reefs, however, are becoming critically threatened by overfishing

as a result of overpopulation and overexploitation of commercial fisheries species (Hughes 2003;

Pandolfi et al. 2003). A recent global analysis has indicated that 75% of coral reef ecosystems

are currently severely threatened by anthropogenic pressure, and this figure is predicted to rise to

90% by 2030 and 100% by 2050 (Burke et al. 2011). Even in remote regions of the South

Pacific where human impacts on reefs have been less intense (Vieux et al. 2004), extractive local

Symbiont photosynthesis in giant clams is promoted Marine

reserves have facilitated rapid recovery of Tridacna maxima on

the island of Mo’orea, French Polynesia.

CHAPTER 3

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economies have resulted in incipient overexploitation of marine resources (Planes et al. 1993;

Van Wynsberge et al. 2016). No-take marine reserves have been promoted as effective tools for

protecting reef biodiversity, maintaining ecosystem function, and permitting recovery of

overexploited species (Balmford et al. 2004; Aburto-Oropeza et al. 2011) and some of the largest

marine reserves are located in the archipelagos of the tropical Pacific Ocean (Russ et al. 2008).

However, inclusive of the creation of these extensive reserves, less than 3% of the world’s

oceans are currently protected from extractive activities (5.7% of coastal regions) and increasing

coastal populations are putting further strain on even these remote marine resources (Vieux et al.

2004).

Despite their relative isolation, Pacific Island communities still face many conservation threats.

In these regions, fishing pressure is strongly correlated with human population density (Russ and

Alcala 1989; Jennings 1998) and increases in fishing pressure have resulted in size-selective

changes in target fisheries populations and alterations of reef ecosystem communities (Jennings

and Polunin 1996). On the island of Mo’orea (Society Islands Archipelago, French Polynesia),

population census figures between 1971 and 2007 show annual population growth rate of 2.4%,

which is higher than the rate for French Polynesia as a whole (1.6%) (Leenhardt et al. 2016).

Effects of overfishing in Mo’orea were first noticed in 1991, when local citizens and scientists

observed that both the sizes and overall catches of fish in Mo’orea’s lagoon were declining

(Lison de Loma 2005; Walker and Robinson 2009). Concern over this decline led to the

implementation of a comprehensive marine management plan, the Plan de Gestion de l’Espace

Maritime (PGEM), to protect impacted marine resources (Salvat and Aubanel 2002).

Established in 2004 with the input of local and extra-territorial stakeholders, the PGEM

designated a network of eight no-take marine reserves covering approximately 20% of Mo’orea’s

lagoon and established size and catch limits on commercial fish and mollusc species throughout

the remaining non-protected areas of the lagoon (Lison de Loma et al. 2008; Walker and

Robinson 2009). Among those species designated for special protection was the giant clam,

Tridacna maxima.

Giant clams are the largest living bivalves and are found throughout the tropical Indo-Pacific

where they have ecological and cultural economic importance (Neo et al. 2015; Van Wynsberge

et al. 2016). In many developing island territories, including French Polynesia, giant clams are

harvested for seafood, and for the ornamental shell and aquarium hobbyist trades (Pickering et al.

2011). In these regions, giant clam products can rank as the number one national export with

annual export production values exceeding $90 million USD or ~5% of total Gross Domestic

Product (Solomon Islands, 2011 UN World Development Indicator GDP estimates). While giant

clams can be numerous on coral reefs (Gilbert et al. 2006) and are capable of mass recruitments

(Braley 1988), their large size and slow maturation (12-13 years on average; Mies et al., 2012)

make them susceptible to overexploitation (Lucas 1994; Neo et al. 2015). Across much of their

range, intensive harvesting has depleted wild stocks (Guest et al. 2008; Neo and Todd 2013). As

a result, all species of giant clams are now listed on the Convention on International Trade in

Endangered Species (CITES) as species of concern, vulnerable to local extirpations (Lucas et al.

1989; Planes et al. 1993; Gilbert et al. 2006; Pickering et al. 2011; Neo and Todd 2013).

Localized extirpations of giant clams have been recorded over the past several decades. For

example, Tridacna gigas (the largest giant clam species) and Hippopus hippopus were once

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present on Singapore’s reefs, but recent surveys conducted in 2003 and 2009/10 (and covering

9670 m2 and 87515 m2 of reef respectively) failed to find a single individual of either species

(Guest et al. 2008; Neo and Todd 2013). Similarly, the previously common T. maxima was also

nearly absent; only a single individual was found in 2009/10 suggesting that this once abundant

bivalve is now functionally extinct over much of Singapore's reefs (Neo and Todd 2013). At

another site in the Lakshadweep Archipelago of India, populations of T. maxima declined

precipitously – decreasing by up to 33% in just one year (2005-2006) – as a result of increasing

harvesting pressure following rapid human population growth in nearby coastal communities

(Apte et al. 2010). While giant clam population densities remain comparatively high in the more

remote and less intensively exploited regions of the Pacific (e.g. the Tuamotu Archipelago of

French Polynesia where clam densities are an order of magnitude higher than at more populated

reefs, (Gilbert et al. 2005, 2006; Van Wynsberge et al. 2016)), recent surveys have shown signs

of incipient overexploitation of even these isolated populations. In French Polynesia, surveys in

the early 1990's of clam stocks in the lagoon of Bora Bora showed that tourism-related

harvesting of T. maxima had resulted in a reduction in mean individual size of 23% over the

course of a year, indicating rapid collection-induced alteration of demography in this population

(Planes et al. 1993). To avoid similar declines in the abundance of T. maxima on the island of

Mo’orea, the PGEM established both no-take zones and strict size restrictions on giant clam

collection across the remaining reef (Lison de Loma 2005).

The regulations regarding T. maxima collection on Mo’orea are straightforward: within PGEM

sites, collection of T. maxima is strictly forbidden, whereas outside of protected sites, only clams

with a shell length of > 10 cm may be harvested. However, catch restrictions on Mo’orea remain

largely unenforced and therefore the protective benefits of the PGEM network depend on

voluntary local compliance. Furthermore, though the no-take reserves of the Mo’orea PGEM

may protect giant clams within designated protected zones, fishing pressure could be intensified

at non-protected sites, spatially concentrating collection efforts and potentially decimating

populations outside the PGEM network. In addition, current PGEM catch-size regulations permit

harvesting only of reproductively mature adult clams (>10 cm shell length; DIREN Polynésie

française, 2005), potentially reducing reproductive potential of giant clam populations on

Mo’orea’s reefs. Focused harvesting of only mature adults has been shown to result in rapid

shifts in population structure in giant clams populations of the Lakshadweep Archipelago,

reducing both the number and size of reproductively mature individuals (Apte et al. 2010). Thus,

the current regulatory framework of the PGEM might be expected to result in severe negative

impacts for giant clams inhabiting non-protected sites, leading to drastic reductions in adult

broodstock and potentially impeding larval replenishment across Mo’orea’s reefs. Further, the

iridescent coloration of giant clams’ mantles that make them so desirable as aquarium specimens also

makes them particularly conspicuous on the reef (Fig. 1) and might in turn result in a

disproportionate removal of brightly-colored clams from non-protected sites. Whereas population

monitoring surveys have been conducted across Mo’orea’s reefs since 2004 (Lison de Loma et

al. 2008) to report potential declines in stock, this monitoring plan does not address possible

reductions in mean individual size or age and potential loss of highly conspicuous (and

economically valuable) color-phenotypes.

To investigate whether the PGEM network has effectively protected giant clams and shifted

demographics of populations outside protected sites, I conducted surveys to assess abundance

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and population demography of the giant clam, Tridacna maxima, on the fringing reefs of

Mo’orea, French Polynesia. I quantified current population structure of T. maxima relative to

that reported prior to PGEM establishment, across a series of paired PGEM and non-protected

control sites to address hypotheses regarding exploitation-driven size- and color-selection of

giant clams outside of Mo’orea’s established PGEM, namely whether clams are more abundant,

larger, and more brightly-colored in protected regions versus on nearby non-protected reefs. I

also report on demographic trends over the ca. 12-year period spanning PGEM establishment to

assess giant clam population recovery rates on Mo’orea’s fringing reef within and without the

marine reserve.

METHODS

Site Selection and Field Surveys

Field surveys were carried out at seven locations on fringing reefs of the island of Mo’orea in the

Society Islands Archipelago of French Polynesia (Fig. 2, Table 1). At six of the seven locations,

two paired sites were surveyed, one within a protected region (PGEM site) and one at a nearby

unprotected section of the reef (control site). Only one location (Site 7, Haapiti; Fig. 2) lacked a

paired PGEM survey site. Controls sites were located at least 50 m away from the PGEM border

(as demarcated by official notification posts installed on the reef during PGEM designation) in order

to reduce edge effects in survey estimates.

A total of 29 surveys were conducted across these seven locations covering a total reef area of 1450

m-2 (Table 1). All surveys were conducted in 25 m x 3 m belt transects arranged parallel to shore

along the fringing reef, 3-15 meters inshore from the reef crest. Surveys were conducted

between 9h00 and 17h30 in 1-3 meters of water during September and October of 2015 and

2016. The number, size (shell length), and predominant coloration of the mantle (teal, blue,

brown; Fig. 1) of all T. maxima clams within each quadrat were recorded.

Population Recovery Assessment

Historical data on T. maxima abundance prior to PGEM establishment were collected from two

repositories: unpublished survey data from 2001 conducted at one location (two paired sites) at

the UC Berkeley Richard Gump Field Station (Wagner 2001) and a dataset of annual benthic

invertebrate surveys (suivi des invertébrés benthiques AMP) available from the Centre de

Recherches Insulaire et Observatoire de l’Environnement (CRIOBE) Service d’Observation

CORAIL (SO CORAIL) conducted at three locations (six paired sites) over the period from 2004

to 2016 across Mo’orea’s MPAs (Galzin et al. 2006).

UC Berkeley Surveys in 2001 were conducted during October/November at six locations on

Mo’orea using belt transects (30 x 3 m) running parallel to shore and carried out at 1-3 m depth

(Wagner 2001). Four of these sites were also resurveyed in this study: Hilton, Pihaena, Temae,

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and Haapiti (Fig. 2). Although it was not possible to replicate the exact survey corridors utilized

in 2001, belt transects were conducted as close as possible to original survey locations on

sections of fringing reef at similar depth. SO CORAIL surveys were conducted in a similar

manner to those performed in this study save that no information on clam coloration or size was

available from the historical data (Galzin et al. 2006).

Data Analysis

The effects of the PGEM network on each response variable (i.e. giant clam abundance, and size-

and color-distribution) were examined independently using Paired t-Tests in the statistical

software program R (v 3.3.2). Historical trends were analyzed using a Before-After-Control-

Impact Series assessment as described by Lison de Loma et al. (Lison de Loma et al. 2008).

Briefly, changes in clam density within the PGEM between pre- and post-reserve establishment

surveys were compared to those occurring over the same period in non-protected controls using a

Two-Tailed Paired t-Tests, a conservative estimate given the likely positive effect of PGEM

establishment on clam population density (Lison de Loma et al. 2008).

RESULTS

Population Demography

Clams were not evenly distributed across Mo’orea’s fringing reefs; higher densities of clams

were observed on the northeastern and eastern shores of the island relative to the west and south,

where clams were very sparse (Fig. 2). In addition, there were significant differences in T.

maxima population structure between protected and non-protected sites (Table 1). Density of

juvenile clams within PGEM sites (0.49 ± 0.11 ind. m-2; x̅ ± se) was significantly greater than in

non-protected sites (0.12 ± 0.03 ind. m-2; Paired Two-Tailed t-Test, df = 12, p < 0.05; Fig. 3A).

Likewise, density of mature clams within PGEM sites (0.12 ± 0.03 ind. m-2) was also

significantly greater than in non-protected sites (0.01 ± 0.00 ind. m-2; Paired Two-Tailed t-Test,

df = 12, p < 0.01; Fig. 3A). Overall, clams were 600% abundant within PGEM sites (0.30 ± 0.07

ind. m-2) than paired controls (0.05 ± 0.03 ind. m-2).

Conspicuously-colored blue and teal clams were significantly more abundant within the PGEM

network (Fig. 3B). Collectively, conspicuously-colored clams were found at a density of 0.004 ±

0.001 ind. m-2 within PGEM sties as compared to 0.001 ± 0.000 ind. m-2 in controls (Paired Two-

Tailed t-Test, df = 14, p < 0.05; Fig. 3B). Individually, blue and teal clams were found to be ca.

400% and 550% more abundant, respectively, than in paired non-protected sites. However,

despite being more abundant within PGEM sites, conspicuously-colored clams were not over-

proportionally represented in protected area populations. Clams with blue and teal mantles

comprised 12.97 ± 8.34% (x̅ ± 95%-CI) and 5.40 ± 2.89% of the population respectively in

PGEM sites as compared to 4.20 ± 4.58% and 2.68 ± 3.02% as observed in control locations

(Paired t-Test, df = 14, p > 0.1 and p > 0.05, respectively).

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Recovery Estimates

Comparison of time-normalized population density trends from before and after PGEM

establishment across all locations (one UC Berkeley and three SO CORAIL site pairs) indicates

that T. maxima density has increased significantly at PGEM sites relative to non-protected

controls: +22.0 ± 9.0% yr-1 (x̅ ± se) versus -0.1 ± 3.2% yr-1 respectively (Paired Two-Tailed t-

Test, t = 3.13, df = 3, p = 0.05; Fig. 4A). Within the three SO CORAIL survey locations this

resulted in a significant 207% increase in giant clam population density in the PGEM (from an

average of 0.053 ± 0.01 ind. m-2 recorded in 2004 (Galzin et al. 2006) to 0.14 ± 0.04 ind. m-2 in

2016) as compared to a 57% decrease in paired control sites (from 0.093 ± 0.01 ind. m-2 to only

0.053 ± 0.01 ind. m-2 over the same time period; Figure 4B). Similarly, average clam density

within the UC Berkeley PGEM focal site (Pihaena) increased from 0.12 ind. m-2 in 2001 to 0.89

ind. m-2 in 2016. This represents a nearly 460% increase in clam abundance relative to the

paired control site wherein clam density was measured at 0.08 ind. m-2 and 0.19 ind. m-2 in 2001

and 2016 respectively (Figure 4B inset; Wagner, 2001).

DISCUSSION

In this study, I sought to address whether the PGEM no-take marine reserve network is an

effective tool for preserving giant clam population density and phenotypic diversity on

Mo’orea’s reefs. I demonstrate that the Mo’orea PGEM has been an exceptionally effective

reserve for promoting recovery of the threatened giant clam, Tridacna maxima. Greater clam

density and larger clam size within PGEM sites relative has resulted in a significant increase in

average clam biomass relative to non-protected controls. In addition, over its 12-years of

establishment, the PGEM network has seen an increase in clam population density, in stark

contrast to a significant decrease observed over this same period across control sites (Fig. 4B).

The PGEM Network Supports Higher Densities of T. maxima on Mo’orea’s Reefs

Tridacna maxima was significantly more abundant within PGEM sites being on average 6-times

more abundant than in nearby non-protected control regions. While conspicuously-colored

clams were not found to be disproportionately absent from non-protected sites, they were

significantly more abundant with the PGEM network (Fig. 3B). This finding refutes the

hypothesis that brightly-colored clams are selectively removed from non-protected sites.

However, PGEM sites do host significantly greater numbers of mature individuals (Fig. 3A).

Within the 2250 m2 of reef surveyed, only 58 adult clams were encountered outside of the

PGEM network with 57 of these found at a single, highly populated location, the Ahi-Popaa

reserve pair (location 3; Fig. 2). This striking imbalance is not surprising given the PGEM catch

restrictions – only clams > 10 cm (i.e. mature adults) can be collected at non-protected sites – but

poses significant ecological consequences for Mo’orea’s T. maxima populations.

Giant clams are iteroparous, reproducing repeatedly over their long lifespans, and thus employ a

“bet-hedging” technique which may result in infrequent, but abundant recruitment to the

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environment (Braley 1988; Roberts 2005). In addition, the planktonic larvae of giant clams

leave open the possibility for recruitment of individuals into non-protected sites, thus permitting

“spill over” effects from marine reserves to nearby or even potentially distant reefs. However,

for many giant clam species, successful recruitment episodes are tightly linked to favorable

oceanographic conditions which occur infrequently or sporadically and may limit population

recovery even despite frequent reproductive events (Louis W. Botsford et al. 1997; Roberts

2005). Thus, the continued presence and productivity of a healthy population of mature

broodstock may be critical for maintaining a viable population of giant clams. The scarcity of

mature individuals at non-PGEM sites therefore represents a significant ecological hurdle to

reestablishment of T. maxima at these locations. Unless larvae are recruited to these sites from

reproductive episodes occurring in the PGEM, giant clam populations cannot increase beyond

current estimates over much of Mo’orea’s fringing reef. This makes the T. maxima populations

of Mo’orea an ideal system for further study of the magnitude and efficacy of “spill-over” effects

from no-take marine reserves.

The PGEM Network is an Exceptionally Effective Marine Management Area

Over the ca. 12-year period examined in this study, T. maxima populations have increased

approximately 3-fold in Mo’orea’s PGEM sites relative to non-protected controls. This is

particularly striking when compared with the general decrease in population observed over the

same time period (-6%) in non-protected sites. Marine reserves can facilitate such rapid

population recoveries, and doubling or even tripling of stocks within five years of protection is

not uncommon (Castilla and Durán 1985; Roberts 1995; Wantiez et al. 1997; Roberts et al.

2001). While T. maxima has taken longer to reach a similar recovery state (12-years versus 5),

this is likely accounted for by its slow growth relative to many other commercially harvested

species.

In a meta-analysis of 89 MPA studies, Halpern found that MPA establishment increases biomass

of protected species by 192% on average (Halpern 2003). This result is considerably higher than

that of a subsequent meta-analysis of 218 MPAs which concluded that in 71% of cases, MPAs

yielded positive ecosystem effects including an average biomass increase of ca. 60% (Gill et al.

2017). This later meta-analysis also demonstrated that the majority of positive outcomes are

restricted to protected areas with adequate staffing and enforcement (Gill et al. 2017). In

reserves with minimal or no enforcement, species recovery was significantly impeded. Un-

enforced, multi-use MPAs displayed very little change, or even slight declines in average

biomass, on the order of -1% (Gill et al. 2017). Mo’orea’s PGEM network stands in stark

contrast to this general trend (Fig. 5); despite minimal enforcement, the protected site network

has permitted above average recovery of an exploited species when compared to the global

average. Whereas unenforced marine reserves typically effect biomass increases on the order of

+125% relative to similar, unprotected, habitats, T. maxima populations within PGEM sites have

shown a significantly greater rate of increase (+322%) which is on par with recovery rate seen in

adequately staffed and enforced marine reserves (Fig. 5). Furthermore, the relatively high

recovery rate demonstrated in T. maxima has also been observed in other fisheries species in

Mo’orea (e.g. parrotfishes, Adam et al., 2011) suggesting that, while the precise magnitude of

population rebound may be taxon specific, there is strong support for the PGEM as a uniquely

effective resource management tool in French Polynesia.

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One potential explanation for the relative success of the PGEM network is the conscious

inclusion of local stakeholders in its design and implementation. Previous research has shown

that marine reserves can be especially effective at promoting species recovery when local

communities support their implementation and regulation and are actively engaged in self-

enforcement (Aburto-Oropeza et al. 2011; Vance 2017). In French Polynesia, these effects are

potentially amplified by an explicit recognition and incorporation of a traditional Polynesian

conservation practice – the rahui. Because of their traditional reliance on limited resources of

isolated island systems, Polynesian culture has a rich preservation ethic and has traditionally

enforced ecologically conservative practices including restricted access to those resources

considered sacred (Ghasarian 2016). In addition, the relative isolation of many of French

Polynesia’s communities results in a lack of free market competition for resources and thus

incentivizes following conservation regulations (Thorax 2016). Furthermore, besides their

emerging value as an economic export, giant clams (Tahitian pahua) are also culturally important

to the Polynesian people who use them for food and in ritual ceremonies. Giant clams also

feature prominently in several formative tales of the Polynesian oral tradition (e.g. the travels of

the Voyager King Rata (Weckler Jr 1943; Firdausy and Tisdell 1992)) and are an important as

part of Islanders’ ethnic cultural identity. Indeed, one of the driving factors behind

implementation of Mo’orea’s PGEM was a local concern for preserving several of these

culturally significant species including giant clams (Salvat and Aubanel 2002; Lison de Loma et

al. 2008). Given the relative success of the PGEM for preserving these species, further research

into local perceptions of the resource management network, especially in regards to cultural or

ideological impacts, is certainly warranted.

Despite the apparent success of the PGEM network in facilitating the recovery of giant clam stocks

on Mo’orea, caution should still be taken in capitalizing on this success and opening reserves for

harvesting. In another long-lived mollusc, the red abalone (Haliotis rufescens), opening of a no-

take reserve to fishing resulted in a nearly 70% decline in population in just three years (Rogers-

Bennett et al. 2013). In addition, fishing resulted in a shift in the size frequency distribution of

abalone towards smaller individuals which in turn lead to a greater than 72% decrease in the egg

production potential of the population over the same short time interval (Rogers-Bennett et al.

2013). This decreased reproductive potential likely already impacts a significant portion of

Mo’orea’s fringing reefs where mature adult clams are entirely absent in open harvest areas. While

the no-take PGEM has proven especially effective in restoring and maintaining a viable T. maxima

population on Mo’orea its efficacy is ultimately dependent on the sanctuary the protected reserves

provide to reproductively mature broodstook clams. Given the slow development of T. maxima

and its demonstrated susceptibility to even minimal local demand (Planes et al. 1993), it is likely

that persistence of giant clam populations on Mo’orea will require continued adherence to the catch

restrictions currently instituted under the PGEM.

ACKNOWLEDGEMENTS

I would like to thank Camilla Souto, Arthur, Barbara, and Brittany Armstrong, and Amanda

Horvath for their invaluable assistance in field surveys. Their contagious positivity and

continuing encouragement made field expeditions pleasant, even in the most terrific of deluges.

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Additional thanks to Drs. Serge Planes and Rène Galzin and the technicians and staff at

CRIOBE, especially Franck Lerouvreur and Pascal Ung, for their assistance and support during

time spent at CRIOBE and in accessing the SO CORAIL demography data. This research was

conducted with US Government support to EJ Armstrong under and awarded by the Department

of Defense, Air Force Office of Scientific Research, National Defense Science and Engineering

Graduate (NDSEG) Fellowship, 32 CFR 168a.

.

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TABLES

Table 1. Tridacna maxima Survey Data. Presented are density data (clams m-2) for each survey

site pair (PGEM or non-protected control) including approximate location of sureys, number of

replicate surveys (N), and the mean population densities (number of individuals m-2 ± s.d.) of

juvenile, adult, and conspicuously-colored T. maxima at each location.

Site Type Location N Juveniles Adults Conspicuous

Hilton Control 17º 28’ 48” S,

149º 49’ 48” W

3 0.06 ± 0.11 0 0.01 ± 0.01

Pihaena PGEM 17º 29’ 24” S,

149º 49’ 48” W

3 0.57 ± 0.39 0.12 ± 0.07 0.03 ± 0.02

Faaupo Control 17º 29’ 24” S,

149º 45’ 00” W

2 0.05 ± 0.06 0 0.00 ± 0.01

Nuarei PGEM 17º 30’ 00” S,

149º 49’ 48” W

2 1.14 ± 0.10 0.06 ± 0.01 0.09 ± 0.04

Popaa Control 17º 31’ 48” S,

149º 46’ 12” W

3 0.39 ± 0.42 0.03 ± 0.02 0.02 ± 0.02

Ahi PGEM 17º 31’ 59” S,

149º 45’ 58” W

3 0.49 ± 0.21 0.25 ± 0.18 0.03 ± 0.02

Haumi Control 17º 34’ 34” S,

149º 47’ 49” W

1 0.04 0 0

Maatea PGEM 17º 34’ 51” S,

149º 47’ 45” W

1 0.03 0 0.01 ± 0.01

Hauru Control 17º 30’ 18” S,

149º 55’ 05” W

1 0.07 0 0

Tetaiuo PGEM 17º 30’ 29” S,

149º 55’ 01” W

1 0.16 0.01 0.04 ± 0.06

Club Med Control 17º 29’ 42” S,

149º 54’ 50” W

3 0.03 ± 0.03 0.00 ± 0.01 0

Tiahura PGEM 17º 29’ 17” S,

149º 54’ 54” W

3 0.23 ± 0.05 0.09 ± 0.06 0.01 ± 0.01

Haapiti Control 17º 33’ 00” S,

149º 52’ 48” W

3 0.01 ± 0.01 0 0

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FIGURE CAPTIONS

Figure 1. Qualitative mantle color morphs of Tridacna maxima on Mo’orea, French Polynesia.

Conspicuously-colored teal (lower left), and blue (upper) clams as compared to the more common,

inconspicuous brown (mid-right) mantle patterning.

Figure 2. Tridacna maxima shows unequal distribution across locations. Size and color

distribution of immature and adult (> 12 cm shell length) Tridacna maxima across survey sites on

Mo’orea, French Polynesia (filled and open map circles). Data are plotted as mean clam size with

standard error (error bars) at each pair of sites (PGEM reserves shaded). Accompanying numbers

denote mean number of individuals per survey. Colors represent qualitative categorization of

mantle pigmentation (teal, blue, and brown).

Figure 3. Tridacna maxima is more abundant in PGEM sites. (A) Tridacna maxima population

density (clams per m2) as measured in 2016 within the seven survey locations for both (A) juvenile

and mature clams (> 12 cm shell length), and (B) clams with conspicuously and inconspicuously

colored mantles (teal and blue and brown respectively); PGEM sites (filled circle) and their

corresponding controls (open circle). Error bars represent standard error around the mean.

Figure 4. Giant clam populations have been increasing within the PGEM. (A) Annual percentage

change in the number of Tridacna maxima clams per m2 at eight paired sites across Mo’orea; four

protected PGEM sites (filled circle) and their corresponding controls (open circle). (B)

Cumulative percentage change in T. maxima population density over the 12-year SO CORAIL

survey period (2004-2016; five sites) and 15-year UC Berkeley survey period (inset; one site).

Data are from this study, Wagner 2001, and Galzin et al. 2006. Error bars represent standard error

around the mean.

Figure 5. The Mo’orea PGEM outperforms other no-take reserves with similarly staffing capacity.

Mean change in biomass with standard deviation (error bars) for multi-use sites (open circles), no-

take reserves (closed circles), and the Mo’orea PGEM no-take network (triangle) group by

reported staffing capacity (none, inadequate, or adequate). Positive values signify biomass

increase within protected area relative to paired controls and dotted-line denotes global average

biomass response (+192%) as determined by Halpern 2003. Values in parentheses on the y axis

denote the number of protected sites that are multi-use and those that are designated no-take

reserves, respectively. Data and figure modified from Gill et. al. 2017.

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FIGURES

Figure 1.

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Figure 2.

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Figure 3.

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Figure 4.

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Figure 5.