ISSN: 1412-033XE-ISSN: 2085-4722

J o u r n a l o f B i o l o g i c a l D i v e r s i t yV o l u m e 1 7 – N u m b e r 2 – O c t o b e r 2 0 1 6

ISSN/E-ISSN:1412-033X (printed edition), 2085-4722 (electronic)

EDITORIAL BOARD (COMMUNICATING EDITORS):Abdel Fattah N.A. Rabou (Palestine), Agnieszka B. Najda (Poland), Alan J. Lymbery (Australia), Alireza Ghanadi (Iran), Ankur

Patwardhan (India), Bambang H. Saharjo (Indonesia), Daiane H. Nunes (Brazil), Ghulam Hassan Dar (India), Guofan Shao (USA),Faiza Abbasi (India), Hassan Pourbabaei (Iran), Hwan Su Yoon (South Korea), I Made Sudiana (Indonesia), Ivan Zambrana-Flores

(United Kingdom), Joko R. Witono (Indonesia), Katsuhiko Kondo (Japan), Krishna Raj (India), Livia Wanntorp (Sweden), M. JayakaraBhandary (India), Mahdi Reyahi-Khoram (Iran), Mahendra K. Rai (India), Mahesh K. Adhikari (Nepal), María La Torre Cuadros

(Peru), Maria Panitsa (Greece), Muhammad Akram (Pakistan), Mochamad A. Soendjoto (Indonesia), Mohib Shah (Pakistan), MohamedM.M. Najim (Srilanka), Pawan K. Bharti (India), Paul K. Mbugua (Kenya), Rasool B. Tareen (Pakistan), Seweta Srivastava (India),

Seyed Aliakbar Hedayati (Iran), Shahabuddin (Indonesia), Shahir Shamsir (Malaysia), Shri Kant Tripathi (India), Stavros Lalas(Greece), Subhash Santra (India), Sugiyarto (Indonesia), T.N.Prakash Kammardi (India)

EDITOR-IN-CHIEF:S u t a r n o

EDITORIAL MEMBERS:English Editors: Suranto (surantouns@gmail.com), Wiryono (wiryonogood@yahoo.com); Technical Editor & Banking: Solichatun

(solichatun_s@yahoo.com); Distribution & Marketing: Rita Rakhmawati (oktia@yahoo.com); Webmaster: Ari Pitoyo(aripitoyo@yahoo.com)

MANAGING EDITORS:Ahmad Dwi Setyawan (unsjournals@gmail.com)

PUBLISHER:The Society for Indonesian Biodiversity

CO-PUBLISHER:Department of Biology, Faculty of Mathematics and Natural Sciences, Sebelas Maret University, Surakarta

ADDRESS:Jl. Ir. Sutami 36A Surakarta 57126. Tel. +62-271-7994097, Tel. & Fax.: +62-271-663375, Email: unsjournals@yahoo.com

ONLINE:biodiversitas.mipa.uns.ac.id

EXPERTISE AND CORRESPONDING EMAIL OF THE COMMUNICATING EDITORS:GENETIC DIVERSITY: Agnieszka B. Najda (agnieszka.najda@up.lublin.pl), Alan J. Lymbery (a.lymbery@murdoch.edu.au), Hwan SuYoon (hsyoon@bigelow.org), Mahendra K. Rai (pmkrai@hotmail.com). SPECIES DIVERSITY: Joko R. Witono (jrwitono@yahoo.com),

Katsuhiko Kondo (k3kondo@nodai.ac.jp), Livia Wanntorp (livia.wanntorp@nrm.se), Mahesh K. Adhikari (mkg_adh@wlink.com.np),Maria Panitsa (mpanitsa@upatras.gr), Mohib Shah (mohibshah@awkum.edu.pk), Paul K. Mbugua (paulkmbugua@gmail.com), Rasool B.

Tareen (rbtareen@yahoo.com). ECOSYSTEM DIVERSITY: Abdel Fattah N.A. Rabou (arabou@iugaza.edu), Alireza Ghanadi(aghannadi@yahoo.com), Ankur Patwardhan (ankurpatwardhan@gmail.com), Bambang H. Saharjo (bhsaharjo@gmail.com), Daiane H.Nunes (nunesdaiane@gmail.com), Faiza Abbasi (faeza.abbasi@gmail.com), Ghulam Hassan Dar (profdar99@gmail.com), Guofan Shao

(shao@purdue.edu), Hassan Pourbabaei (hassan_pourbabaei@yahoo.com), I Made Sudiana (sudianai@yahoo.com), Ivan Zambrana-Flores (izambrana@gmail.com), Krishna Raj (krishnarajisec@yahoo.co.uk), Mahdi Reyahi-Khoram (phdmrk@gmail.com), Mochamad A.Soendjoto (masoendjoto@gmail.com), Mohamed M.M. Najim (mnajim@kln.ac.lk), Pawan K. Bharti (gurupawanbharti@rediffmail.com),

Seweta Srivastava (shalu.bhu2008@gmail.com), Seyed Aliakbar Hedayati (Hedayati@gau.ac.ir), Shahabuddin (shahabsaleh@gmail.com),Shahir Shamsir (shahirshamsir@gmail.com), Shri Kant Tripathi (sk_tripathi@rediffmail.com), Stavros Lalas (slalas@teilar.gr), Subhash

Santra (scsantra@yahoo.com), Sugiyarto (sugiyarto_ys@yahoo.com), T.N.Prakash Kammardi (prakashtnk@yahoo.com).ETHNOBIOLOGY: M. Jayakara Bhandary (mbjaikar@gmail.com), María La Torre Cuadros (angeleslatorre@lamolina.edu.pe),

Muhammad Akram (makram_0451@hotmail.com).

Society for IndonesiaBiodiversity

Sebelas Maret UniversitySurakarta

Diversity analysis and genetic potency identification of local rice cultivars in Penajam Paser Utara and Paser Districts, East Kalimantan NURHASANAH, SADARUDDIN, WIDI SUNARYO

401-408

Soil and leaf nutrient status on growth of Macaranga gigantea in secondary forest after shifting cultivation in East Kalimantan, Indonesia DWI SUSANTO, DADDY RUCHIYAT, MAMAN SUTISNA, RUDIANTO AMIRTA

409-416

Microscopic decay pattern of yellow meranti (Shorea gibbosa) wood caused by white-rot fungus Phlebia brevispora ERWIN

417-421

Morphological, anatomical and isozyme variation among giant taro (Alocasia macrorrhizos) accessions from Central Java, Indonesia SURATMAN, ARI PITOYO, SEPTIANA KURNIASARI, SURANTO

422-429

Single Nucleotide Polymorphism within the LDLR gene and responsiveness of cynomolgus macaque (Macaca fascicularis) to atherogenic diet ACHMAD TAHER, DEDY DURYADI SOLIHIN, SULISTIYANI, DONDIN SAJUTHI, DEWI APRI ASTUTI

430-434

The local knowledge of the rural people on species, role and hunting of birds: Case study in Karangwangi Village, West Java, Indonesia JOHAN ISKANDAR, BUDIAWATI SUPANGKAT ISKANDAR, RUHYAT PARTASASMITA

435-446

Mechanisms of antixenosis, antibiosis, and tolerance of fourteen soybean genotypes in response to whiteflies (Bemisia tabaci) APRI SULISTYO, ALFI INAYATI

447-453

Short Communication: Morphological study of Fagraea ceilanica (Gentianaceae) in Mount Nglanggeran, Yogyakarta, Indonesia WIDODO1, MUHAMMAD JA’FAR LUTHFI

454-460

Short Communication: Evaluation of quantitative and qualitative morphological characters of sunflower (Helianthus annuus) germplasm RULLY DYAH PURWATI, ANIK HERWATI

461-465

Dendrochronology of young Swietenia macrophylla and the variation of its growth response to the past wet climate in Bengkulu, Indonesia AGUS SUSATYA, YANSEN

466-472

Soil invertebrates diversity in coffee-pine agroforestry system at Sumedang, West Java, Indonesia IDA KINASIH, TRI CAHYANTO, ANA WIDIANA, DESTI NURBAH INDAH KURNIA, UCU JULITA, RAMADHANI EKA PUTRA

473-478

Diversity of faunal communities in the Biodiversity Park of Ciherang, Bogor, West Java, Indonesia HENDRA GUNAWAN, SUGIARTI, ANITA RIANTI, VIVIN SILVALIANDRA SIHOMBING

479-486

Short Communication: Genetic diversity and conservation strategy considerations for highly valuable medicinal tree of Taxus sumatrana in Indonesia HENTI HENDALASTUTI RACHMAT, ATOK SUBIAKTO, KOICHI KAMIYA

487-491

ISSN: 1412-033X E-ISSN: 2085-4722

Short Communication: Identification of growth hormone gene variation in exon region at Indonesian Local Cattle based on PCR-SSCP method SURYA NUR RAHMATULLAH, JAKARIA, RONNY R. NOOR

492-497

Short Communication: Fecundity of freshwater prawn (Macrobrachium rosenbergii) in selected rivers of Sarawak, Malaysia KHAIRUL ADHA AR, FAZNUR FATEH NICHOLAS, SHABDIN MOHD. LONG, AWANGKU SHAHRIR NAQIUDDIN, YUZINE ESA

498-502

Vegetative and generative growth of groundnut genotypes under biotic environmental stress AGUSTINA ASRI RAHMIANNA, ERIYANTO YUSNAWAN

503-509

Short Communication: Georeferencing orchids specimen history cards in Bogor Botanic Gardens to increase their use for conservation efforts EKA MARTHA DELLA RAHAYU , SAFRAN YUSRI

510-514

Relationship of physicochemical factors with fish biomass and production in Shadegan wetland, Iran SEYEDAHMADREZA HASHEMI, RASOUL GHORBANI, FARHAD KYMARAM, SEYED ABASS HOSSINI, GHOLAMREZA ESKANDARI, ALIAKBAR HEDAYATI

515-522

Identification and expression of two types of chicken GnRH-II genes in mature hard-lipped barb, Osteochilus hasselti N.A. PRAYOGO, G.E. WIJAYANTI, I. SULISTYO, P. SUKARDI,

523-530

Plant diversity after sixty years post coal mining in East Kalimantan, Indonesia LIRIS LIS KOMARA, DEVI NANDITA CHOESIN, TATI SURYATI SYAMSUDIN

531-538

Sequence-Related Amplified Polymorphism (SRAP) analysis for studying genetic characterization of Bouea macrophylla SOMBHAT KAEWPONGUMPAI, SUPATTRA POEAIM, ONGKARN VANIJAJIVA

539-543

Suitability and availability analysis of tropical forest wood species for ethanol production: a case study in East Kalimantan RUDIANTO AMIRTA, AHMAD MUKHDLOR, DEWI MUJIASIH, ELIS SEPTIA, SUPRIADI, DWI SUSANTO

544-552

Short Communication: Conservation of mangrove gobies in Lesser Sunda Islands, Indonesia YULIADI ZAMRONI, ZEEHAN JAAFAR, KADARWAN SOEWARDI, BAMBANG SURYOBROTO

553-557

Fish community structure in high water temperature around Bontang Industrial Estate, East Kalimantan, Indonesia IWAN SUYATNA, A. SYAFEI SIDIK, ISMAIL FAHMY ALMADI, SAMSUL RIZAL, KOMSANAH SUKARTI

558-564

Identification of soybean genotypes adaptive and productive to acid soil agro-ecosystem M. MUCHLISH ADIE, AYDA KRISNAWATI

565-570

Molecular identification of commercially important species of Nemipterus (Perciformes: Nemipteridae) in surrounding seas of Malaysia AYESHA IMTIAZ, DUONG THUY YEN, SITI AZIZAH MOHD NOR, DARLINA MD. NAIM

571-577

Identification of denitrifying bacteria from sediments of Rawa Jombor waters, Central Java and its trophic status SUNARTO, RATNA SETYANINGSIH, ANDRI YANTI

578-584

Seagrass biodiversity at three marine ecoregions of Indonesia: Sunda Shelf, Sulawesi Sea, and Banda Sea MUJIZAT KAWAROE, ADITYA HIKMAT NUGRAHA, JURAIJ, ILHAM ANTARIKSA TASABARAMO

585-591

Morphology, anatomy, and mycorrhizal fungi colonization in roots of epiphytic orchids of Sempu Island, East Java, Indonesia SITI NURFADILAH, NINA DWI YULIA, ESTI ENDAH ARIYANTI

592-603

Short Communication: Resistance of eleven new hybrid maize genotypes to Turcicum leaf blight (Exserohilum turcicum) BUDI SETYAWAN, IRFAN SULIANSYAH, ASWALDI ANWAR, ETTI SWASTI

604-608

Characterization of soybean genotypes for Asian soybean rust reaction under screen house condition ALFI INAYATI, ERIYANTO YUSNAWAN

609-613

Diversity and phylogenetic relationship of cellulolytic bacteria from the feces of Bali Cattle in South Central Timor, East Nusa Tenggara, Indonesia HILDEGARDIS MISSA, ARI SUSILOWATI, RATNA SETYANINGSIH

614-619

Choosing native tree species for establishing man-made forest: A new perspective for sustainable forest management in changing world ATOK SUBIAKTO, HENTI HENDALASTUTI RACHMAT, CHIKAYA SAKAI

620-625

Long-term variability of zooplankton community under climate warming in tropical eutrophic man-made lake SUNARDI, TAKAO YOSHIMATSU, NIKO JUNIANTO, NADIA ISTIQAMAH, TYRELL DEWEBER

626-633

Short Communication: Fish diversity of the Batang Toru River System, South Tapanuli, North Sumatra DEWI IMELDA ROESMA, ADA CHORNELIA, AHMAD MURSYID, MISTAR KAMSI

634-641

Antidiabetic screening of some Indonesian marine cyanobacteria collection SRI PRIATNI, THELMA A. BUDIWATI, DIAH RATNANINGRUM, WAWAN KOSASIH, RINA ANDRYANI, HANI SUSANTI, DWI SUSILANINGSIH

642-646

Data provision of PIK3CA gene diversity and recombinant plasmids preparation for control DNA in developing the trastuzumab predictive response diagnostic kit DESRIANI, BUGI RATNO BUDIARTO, WIRSMA ARIF HARAHAP, M. ALI WARISMAN, AUDREY VANIA CLARISSA OMPUSUNGGU, DINA ATHARIAH, FARIDA MIRNAWATI, IDA YUSSRIYANI, FUAD ALAHWANI, AHMAD RIZQI KURNIAWAN

647-652

Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra FITMAWATI, IBNA HAYATI, NERY SOFIYANTI

653-656

The water quality parameters controlling diatoms assemblage in Rawapening Lake, Indonesia T.R. SOEPROBOWATI, S.D. TANDJUNG, SUTIKNO, S. HADISUSANTO, P. GELL, HADIYANTO, S.W.A. SUEDY

657-664

Freshwater fish diversity in an oil palm concession area in Mimika, Papua HENDERITE L. OHEE

665-672

The abundance of phytoplankton and its relationship to the N/P ratio in Jakarta Bay, Indonesia TUMPAK SIDABUTAR, DIETRIECH G. BENGEN, SAM WOUTHUYZEN, TRI PARTONO

673-678

Biological characteristics on three demersal fish landed in Tegal, north coast of Central Java, Indonesia DUTO NUGROHO, MUFTI P. PATRIA, JATNA SUPRIATNA, LUKY ADRIANTO

679-686

Short Communication: RAPD fingerprinting key and phylogenetic of nine seagrass species from Sanur coastal water, Bali, Indonesia using matK sequences MADE PHARMAWATI, UUL SHOVI NURKAMILA, STEVANUS

687-693

Ethnoastronomy – The Baduy agricultural calendar and prediction of environmental perturbations JOHAN ISKANDAR, BUDIAWATI S.ISKANDAR

694-703

The diversity of secondary metabolites in Indonesian soybean genotypes ERIYANTO YUSNAWAN

704-710

Short Communication: Identification of Growth Hormone gene polymorphism for beef cattle in Pesisir Selatan District, West Sumatra, Indonesia DINO EKA PUTRA, SUMADI, TAKUYA KANAZAWA, TETY HARTATIK

711-715

Review: Persistent pioneers; Borassus L. and Corypha L. in Malesia GRAHAM E. EAGLETON

716-732

Syzygium diversity in Gunung Baung, East Java, Indonesia DEDEN MUDIANA

733-740

Short Communication: The survival rate and one-year growth of Shorea javanica, Shorea macrobalanos and Hopea mengarawan in coal mined land in Central Bengkulu, Indonesia WIRYONO, HERY SUHARTOYO, ALI MUNAWAR

741-745

Insect pollinator diversity along a habitat quality gradient on Mount Slamet, Central Java, Indonesia IMAM WIDHIONO, EMING SUDIANA, EDY TRI SUCIANTO

746-752

Markers-traits association for iron toxicity tolerance in selected Indonesian rice varieties YUDHISTIRA NUGRAHA, DWINITA W. UTAMI, IDA ROSDIANTI, SINTHO WAHYUNING ARDIE, MUNIF GHULAMMAHDI, SUWARNO, HAJRIAL ASWIDINNOOR

753-763

Prospect of indigenous plant species for revegetation in the tailings area of ex community gold mine WIWIK EKYASTUTI, DWI ASTIANI, EMI ROSLINDA

764-768

Comparison of Neurospora crassa and Neurospora sitophila for phytase production at various fermentation temperatures ATIT KANTI, I MADE SUDIANA

769-775

Four new varieties of Begonia from interspecific hybridization Begonia natunaensis C.W.Lin & C.I.Peng × Begonia puspitae Ardi HARTUTININGSIH-M. SIREGAR

776-782

Human-Leopard Conflict in Girimukti Village, Sukabumi, Indonesia RUHYAT PARTASASMITA, SYA SYA SHANIDA, JOHAN ISKANDAR, ERRI NOVIAR MEGANTARA, TEGUH HUSODO, PARIKESIT, NICHOLAS MALONE

783-790

The value of secondary forest patches for bird conservation in palm oil landscapes of Riau, Sumatra ERNIWATI, ERVIZAL AMIR MUHAMMAD ZUHUD, YANTO SANTOSA, ISWANDI ANAS

791-798

Short Communication: Spiders of Sabah: Fifty new records including the description of a new Leucauge species DZULHELMI MUHAMMAD NASIR, WONG CHUN XING, ASRAF BAKRI, FASZLY RAHIM, NORMA-RASHID YUSOFF

799-807

The length-weight correlation and population dynamics of razor clams (Solen regularis) in Surabaya east coast, Indonesia NINIS TRISYANI, ENDANG YULI HERAWATI, MAHENO SRI WIDODO, DADUK SETYOHADI

808-813

Wati (Piper methysticum) medicinal plant: The ethnobiological and ethnomedicinal values of the Marind tribe in Merauke, Papua, Indonesia SUHARNO, ROSYE HEFMY RECHNELTY TANJUNG, SUPENI SUFAATI, VERENA AGUSTINI

814-822

Handicraft of butterflies and moths (Insecta: Lepidoptera) in Bantimurung Nature Recreation Park and its implications on conservation INDRA A.S.L.P. PUTRI

823-831

Botanical survey in thirteen montane forests of Bawean Island Nature Reserve, East Java Indonesia: Flora diversity, conservation status, and bioprospecting TRIMANTO, LIA HAPSARI

832-846

Temporal diversity of Taraxacum kok-saghyz plants reveals high rubber yield phenotypes KATRINA CORNISH, STEVEN L. KOPICKY, SARAH K. MCNULTY, NIKITA AMSTUTZ, ANN M. CHANON, SONIA WALKER, MATTHEW D. KLEINHENZ, ALBERT R. MILLER, JOHN G. STREETER

847-856

Polycyclic aromatic hydrocarbon degrading bacteria from the Indonesian Marine Environment ELVI YETTI, AHMAD THONTOWI, YOPI

857-864

Crown shape dynamics of dense mangrove Kandelia obovata stands in Manko Wetland, Okinawa Island, Japan KANGKUSO ANALUDDIN, ANDI SEPTIANA, SAHADEV SHARMA, AKIO HAGIHARA

865-872

The uses of bioresources of biosphere reserve by local community of Giam Siak Kecil-Bukit Batu, Riau Province, Indonesia PRIMA WAHYU TITISARI, TATI SURYATI SYAMSUDIN, ACHMAD SJARMIDI

873-887

Spatial and temporal description of water pollution status of Gajah Mungkur Reservoir Wonogiri, Central Java, Indonesia WIRYANTO

888-893

Morphological diversity and the cultivation practice of Abelmoschus manihot in West Papua, Indonesia SARASWATI PRABAWARDANI, IRNANDA A.F. DJUUNA, FENNY ASYEREM, ALEXANDER YAKU, GRAHAM LYONS

894-899

The ethnobotany of medicinal plants in supporting the family health in Turgo, Yogyakarta, Indonesia MAIZER SAID NAHDI, IKA NUGRAHENI ARI MARTIWI, DISCA CAHYARI ARSYAH

900-906

Bacterial spatial distribution in the sediments of Gajah Mungkur Reservoir, Central Java, Indonesia PENI PUJIASTUTI, MASYKURI MASYKURI, TOTOK GUNAWAN, SUTARNO

907-914

Front cover: Phlebia brevispora

(PHOTO: ERWIN)

Published semiannually PRINTED IN INDONESIA

E-ISSN: 2085-4722 ISSN: 1412-033X

DNA fingerprintingby Made Pharmawati

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TIME SUBMITTED 03-JAN-2017 10:53AM

SUBMISSION ID 756550790

WORD COUNT 4163

CHARACTER COUNT 21948

BIODIVERSITAS_SEAGRASS_FINGERPRINTING_KEY.PDF (353.07K)

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