june, 2007
DESCRIPTION
Corporate Registration System - A future solution. Akos Papp. June, 2007. Outline. What is a registration system? General requirements Planned features System architecture Planned configurations Schedule of releases. What is a registration system?. - PowerPoint PPT PresentationTRANSCRIPT
June, 2007
Akos Papp
Corporate Registration System- A future solution
• What is a registration system?• General requirements• Planned features• System architecture• Planned configurations• Schedule of releases
Outline
What is a registration system?
• A system that enables to distinguish between compounds that are different according to a specified business logic, and is able to store these chemical structures and related data accordingly.
General requirements
• Convert compound structures to a standard format according to customizable rules
• Enable duplication control• Generate a unique compound registration ID• Consider salts and other auxiliary structures• Handle batches, lots, samples, and mixtures• Stores accompanying data in relation to the
registration ID• Make all compound related data accessible
for external applications (e.g. inventory, ELN, biological assay system, etc.)
Planned chemical features – 1
• Customization capability to follow business logic– Extendable structure standardization
rules– Identification, strip and registration of salt
and auxiliary structures– Multilevel duplication control
(connectivity, stereochemistry, etc.)– Considers tautomers
• Hierarchical storage of batches, lots and samples
• Proper registration of mixtures
Planned chemical features – 2
• Self-explaining registration IDs• Database logic enabling the optional
storage of– Reactions, reagents and intermediates– Libraries and Markush structures– Predicted properties– Preprocessed experimental (analytical,
chemical, biological) properties – Wellplate info
System architecture - overall
InventorySystem
Library and Reaction Registration
CompoundRegistration
Property Registration
Inhouse Compounds
EnumerationSystem
PropertyCalculations
ELNSystem
Registration
Transitoryarea
Corporate Registry
External Compounds
Analytics
Chem. PropertyMeasurements
BiologicalAssays
Chemical structure registration
Analytics
External Compounds
Inhouse Compounds
EnumerationSystem
Standardizedproduct
structures
Registration
Data mapping /standardization
Structurestandardization
Primary compounds
Salt / counter ions
Auxiliary comp.
Accompanying data (Supplier, ID, batch, lot, sample,
purity, solvent, quantity, price)
Connectivity,tautomer,
stereoisomer,and salt level
Duplication control
Compounds
Salt counter ions
Cocrystall. comp.
ELNSystem
Transitoryarea
DuplicationControl
Options:connectivity,
tautomer,stereoisomer,
andsalt/solvent
level
Corporate Registry
Batch / lot / sample
duplicationcontrol
Production related data(Batch, lot, quantity, etc.)
Purity data(sample)
Data related toreaction basedenumeration
Structurequality check
Draft DB architecture – compounds
Library and reaction registration
Chemical structures Purity data
(batch / lot / sample)
TLC, LCMS,NMR, etc.
dataand/orimages
Analytics
Registration ofInhousely
Synthesized Compounds
EnumerationSystem
Standardizedproduct
structuresRegistration
ofMarkush str. and building
blocks
OverlapCheck
Registration
Transitoryarea
ELNSystem
Reactionand/or
componentduplication
control
Corporate Registry
Registration of protocols
(theor. conditions), productions
(batches, real conditions)
Registration of reaction
structures,reaction
schemes, components,
reaction steps,libraries
Property registration
Chem. propertypredictions
Analytics
Biologicalassays(in vitro,in vivo,
preclinical)
CorporateRegistry
Purity data (sample)TLC, LCMS, NMR,etc. data/images
Predictedproperties
Chemicalproperty
measurements
Preprocessedexperimental
properties
Preprocessed experimental
values:viability,
inhibition %,Ki, IC50,
EC50, LD50, PD/PK values,
etc.
Planned configurations – 1
• Basic– Standalone solution
• Instant JChem with predefined forms and DB structure
– Customizable business logic
Planned configurations – 2
• Standard– Client/server solution
• Registration plugin for Instant JChem• Oracle, MSSQL, MySQL support (in this order)• Client access synchronizable with existing SQL
usn/psw• Compatible with existing storage systems
– Transition tables and Registration Authority
Planned configurations – 3
• Professional– Service based solution
• Easily implementable into existing storage systems
• Web services: SOA(P) support• Enhanced security support (multilevel
authorization and encryption)• Web based client side GUI
Schedule of releases
• Basic configuration– Autumn 2007
• Standard configuration– End of 2007 or Spring 2008
• Professional configuration– Middle or end of 2008
• Depending on market needs• Looking for cooperators
Thank you for your attention!
Draft DB architecture - compounds
Draft DB architecture - compounds