laboratory information management system, lrn & surveillance todd lasco texas department of...
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Laboratory Information Management System, LRN &
Surveillance
Todd Lasco
Texas Department of State Health Services
Laboratory Services Section
Enhancing Seasonal Influenza Surveillance
Austin, Texas
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LIMS - Current Status
Today - “Go-Live” Virology, Mycobacteriology and Consumer Microbiology Laboratory use at the Austin & South Texas Laboratories
Cohort >> LabWare LIMS User roles via Citrix > those external to DSHS
1) Epidemiologist
2) Submitter
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DSHS Lab Contact
Liz Delamater, Ph.D. Manager, Microbiological Sciences Branch Texas Department of State Health Services
1100 West 49th Street Austin, TX 78756
512-458-7592 (office)
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Laboratory Response Network Established in response to Presidential
Decision Directive 39
Founding partners: Centers for Disease Control and Prevention (CDC), Association of Public Health Laboratories (APHL), and Federal Bureau of Investigation (FBI)
Operational in August 1999
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LRN Mission Provide infrastructure to increase
laboratory capacity
Respond to biological and chemical threat agents and other public health emergencies
150+ state and local public health, federal, military, food testing, veterinary, environmental, and international laboratories
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Rule-out testing and referral of specimens
Confirmatory testing for most select agents
Definitive characterization of the most deadly infectious agents
LRN Structure
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Where We Started: 1999
6 Laboratories 1 Level C 5 Level B
1 Dedicated technician/lab 2 Real-time PCR machines
Austin & San Antonio
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El Paso
San AntonioHouston
Austin
TylerDallas
Corpus Christi
Harlingen
Laredo
Ft. Worth
Wichita FallsLubbock
Texas LRN Locations
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• 11 Laboratories – 10 Confirmatory laboratories each w/ BSL-3
facilities– 1 BSL-2 laboratory capable of confirming B.
anthracis and Y. pestis only– Laredo 2009
• Real-time PCR and Time-Resolved Fluorescence (TRF) platforms in each confirmatory laboratory (10)
Texas LRN Laboratories
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• Avian H5 primer/probe sets – LRN
• Flu A, Flu B, H1, H3, H7 primer/probe sequences - APHL
• Houston, Tarrant County & Dallas LRNs
Texas LRN Influenza Testing
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• Establish greater connectivity between our sentinel labs and our regional LRNs
• Insert our regional LRNs into the loop of testing/routing samples here to DSHS for viral isolation such that that particular LRN or LRNs can provide a quicker TAT and feedback to the submitter through PCR testing at their site
• Test Labware LIMS functionalities
Pilot
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Texas LRN ContactsLRN Name Phone Number
24/7 Phone Number
Austin Rahsaan Drumgoole
Grace Kubin
David Klein
512-458-7185
512-458-7552
512-458-7111x3486
512-689-5537
512-634-6727512-689-9945
Corpus Christi Donna Rosson
Sandra Heatherly
361-826-1323
361-851-7214
361-533-3500
361-533-3499
Dallas County Joey Stringer
Edward Bannister
972-692-2762
214-819-1952
972-342-5605
214-677-7876
El Paso VACANT 915-543-3255 915-252-0376
Fort Worth/
Tarrant County
Rebecca McMath817-321-4755 817-929-4720
Harlingen/
South Texas
Kristina Zamora956-364-8369 956-454-4387
Houston Jane O’Brien 713-558-3490 713-376-0484
Lubbock Kim Swacina
Michael Lipton
806-775-2908
806-775-3087
806-252-3943
806-392-5125
San Antonio Patricia Blevins 210-207-5883 210-854-2594
Tyler/PHLET Irene Krumins 903-877-5056 903-312-3537
Wichita Falls Jo Harp 940-761-7873 940-761-7800
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Contact Information
Todd Lasco
Texas Department of State Health Services
Laboratory Services Section MC 1947P.O. Box 149347
Austin, TX 78714-9347Ph: 512.458.7111 (x3535)
Fx: 512.458.7431
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Questions?