lies my sophomore organic professor told me christopher r

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Lies My Sophomore Organic Professor Told Me Group Meeting February 8th, 2012 Christopher R. Jamison

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Page 1: Lies My Sophomore Organic Professor Told Me Christopher R

Lies My Sophomore OrganicProfessor Told Me

Group Meeting

February 8th, 2012

Christopher R. Jamison

Page 2: Lies My Sophomore Organic Professor Told Me Christopher R

What Is This Talk About?

3 Mechanisms Taught to Organic Chemistry Students that are Incorrect

The traditional mechanism will be presented along with incompatible data

An alternate mechanism will be presented with proof to support it

Examples will be presented wherein the alternate mechanism is instructive

Page 3: Lies My Sophomore Organic Professor Told Me Christopher R

The Mechanism of DMAP CatalyzedAcylation of Alcohols

Recommended Reading: Spivey, A.; Arseniyadis, S. ACIEE, 2004, 43, 5436

HO AcO

CDCl3, RT

+ HOAcAc2O

N

NMe2

Page 4: Lies My Sophomore Organic Professor Told Me Christopher R

The Traditionally Taught Mechanism

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O Cl

N

NMe2

R

O

R'O

O

RCl

HCl

R'OH

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

O

RR'O

Page 5: Lies My Sophomore Organic Professor Told Me Christopher R

Is This True?

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O Cl

N

NMe2

R

O

R'O

O

RCl

HCl

R'OH

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

O

RR'O

Page 6: Lies My Sophomore Organic Professor Told Me Christopher R

Is This True?

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O Cl

N

NMe2

R

O

R'O

O

RCl

HCl

R'OH

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

O

RR'O

Page 7: Lies My Sophomore Organic Professor Told Me Christopher R

The Nucleophilicity of DMAP

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving grouppKa Conjugate Acid

9.7

-2.4

Nucleophile Mayr N value

13.2

7.5

DMAP

EtOH

Page 8: Lies My Sophomore Organic Professor Told Me Christopher R

Is This True?

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O Cl

N

NMe2

R

O

R'O

O

RCl

HCl

R'OH

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

O

RR'O

Page 9: Lies My Sophomore Organic Professor Told Me Christopher R

IR Data for Various Acetyl Compounds

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

IR C=O Stretch (cm-1)

Me

O

Cl

Me

O

OAc

Me

O

OEt

Me

O

NMe2

1806

1832, 1761

1743

1662

N

N

Me

O Cl

1755

Me

Me

Holfe, G. et al. ACIEE, 1978, 17, 569.

Page 10: Lies My Sophomore Organic Professor Told Me Christopher R

IR Data for Various Acetyl Compounds

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

IR C=O Stretch (cm-1)

Me

O

Cl

Me

O

OAc

Me

O

OEt

Me

O

NMe2

1806

1832, 1761

1743

1662

N

N

Me

O Cl

1755

Me

Me

Holfe, G. et al. ACIEE, 1978, 17, 569.

Page 11: Lies My Sophomore Organic Professor Told Me Christopher R

IR Data for Various Acetyl Compounds

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

IR C=O Stretch (cm-1)

Me

O

Cl

Me

O

OAc

Me

O

OEt

Me

O

NMe2

1806

1832, 1761

1743

1662

N

N

Me

O Cl

1755

Me

Me

N

N

Me

O Cl

Me

Me

Holfe, G. et al. ACIEE, 1978, 17, 569.

Page 12: Lies My Sophomore Organic Professor Told Me Christopher R

Thermodynamic Considerations

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving groupN

N

Me

O OAc

N

N

Ac2O +

Equilibrium position is ca. !H= -5.97kcal/molbased on Van't Hoff analysis

Holfe, G. et al. ACIEE, 1978, 17, 569.

Page 13: Lies My Sophomore Organic Professor Told Me Christopher R

Comparison of Different Acetyl Sources

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

HO AcO

300mol% DMAP

Ac2O (2equiv)

CDCl3, RT

HO AcO

300mol% DMAP

AcCl (2equiv)

CDCl3, RT

+ HOAc

+ HCl

<10% Acylpyridinium at equilibrium

100% Acylpyridinium at equilibrium

Spivey, A.; Arseniyadis, S. ACIEE, 2004, 43, 5436

Page 14: Lies My Sophomore Organic Professor Told Me Christopher R

Comparison of Different Acetyl Sources

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

HO AcO

300mol% DMAP

Ac2O (2equiv)

CDCl3, RT

HO AcO

300mol% DMAP

AcCl (2equiv)

CDCl3, RT

+ HOAc

+ HCl

<10% Acylpyridinium at equilibrium t1/2= 7min

100% Acylpyridinium at equilibrium t1/2= 20min

"..reactiviteis of N-acylpyridinium salts do not correlate wellwith their intrinsic carbonyl activation as expected fromresonance and spectrophotochemical properties. In particular, their reactivity is highly anion- and solvent-dependent."-Spivey, A., Arseniyadis, S. ACIEE. 2004, 43, 5436.

Spivey, A.; Arseniyadis, S. ACIEE, 2004, 43, 5436

Page 15: Lies My Sophomore Organic Professor Told Me Christopher R

Is Any of This True?

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O Cl

N

NMe2

R

O

R'O

O

RCl

HCl

R'OH

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

O

RR'O

Page 16: Lies My Sophomore Organic Professor Told Me Christopher R

Relative pKa's of Various Leaving Groups

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

pKa of Leaving Group Conjugate Acid

Me

O

Cl

Me

O

OAc

Me

O

OEt

Me

O

NMe2

-8.0

4.8

15.5

35

N

NMe2

Me

O Cl

9.7

Page 17: Lies My Sophomore Organic Professor Told Me Christopher R

Is Any of This True?

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O Cl

N

NMe2

R

O

R'O

O

RCl

HCl

R'OH

"DMAP is, in fact, more nucleophilicthan the alcohol, and it attacks theacyl chloride rapidly, forming a highlyelectrophilic (because of the positivecharge) intermediate. It is then thisintermediate that subsequently reacts with the alcohol to give the ester.

-Clayden, J. et al. Organic Chemistry. Oxford University Press, 2007.

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium is more electrophilic than the acid chloride

3. The pyridinium is a great leaving group

O

RR'O

Page 18: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O

Cl

O

RCl

R'OH

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

O

RR'O

N

NMe2

R

O

Cl

HO

R'

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

Page 19: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O

Cl

O

RCl

R'OH

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

O

RR'O

N

NMe2

R

O

Cl

HO

R'

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

Page 20: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O

Cl

O

RCl

R'OH

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

O

RR'O

N

NMe2

R

O

Cl

HO

R'

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

Page 21: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

N

N

NMe2

R

O

Cl

NMe2

N

NMe2

R

O

Cl

O

RCl

R'OH

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

O

RR'O

N

NMe2

R

O

Cl

HO

R'

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

Page 22: Lies My Sophomore Organic Professor Told Me Christopher R

Explains the Rate Difference

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

HO AcO

300mol% DMAP

Ac2O (2equiv)

CDCl3, RT

HO AcO

300mol% DMAP

AcCl (2equiv)

CDCl3, RT

+ HOAc

+ HCl

<10% Acylpyridinium at equilibrium t1/2= 7min

100% Acylpyridinium at equilibrium t1/2= 20min

Page 23: Lies My Sophomore Organic Professor Told Me Christopher R

Explains the Rate Difference

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

<10% Acylpyridinium at equilibrium t1/2= 7min

100% Acylpyridinium at equilibrium t1/2= 20min

The more basic counterion compensates

for the lower acylpyridinium concentration

N

NMe2

Me

O

AcO

HO

R'

N

NMe2

Me

O

Cl

HO

R'

Page 24: Lies My Sophomore Organic Professor Told Me Christopher R

A Point of Clarification

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

pKa

5.2

6.0

6.7

9.7

Base rel. rate

80.9

3.8

1

3.0 x 106

Pyridine

2-methylpyridine

2,6-dimethylpyridine

DMAP

OH OBz

BzCl (1equiv)

cat. (100mol%)

benzene, RT

There is no correlation between

the rate constant and the pKa.

DMAP is Not a General Base Catalyst

N

NMe2

Me

O

AcO

HO

R

Me

O

AcO

HO

R

O Me

O

=

Spivey, A.; Arseniyadis, S. ACIEE, 2004, 43, 5436

Page 25: Lies My Sophomore Organic Professor Told Me Christopher R

A Point of Clarification

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

pKa

5.2

6.0

6.7

9.7

Base rel. rate

80.9

3.8

1

3.0 x 106

Pyridine

2-methylpyridine

2,6-dimethylpyridine

DMAP

OH OBz

BzCl (1equiv)

cat. (100mol%)

benzene, RT

There is no correlation between

the rate constant and the pKa.

DMAP is Not a General Base Catalyst

N

NMe2

Me

O

AcO

HO

R

Me

O

AcO

HO

R

O Me

O

=

Spivey, A.; Arseniyadis, S. ACIEE, 2004, 43, 5436

Page 26: Lies My Sophomore Organic Professor Told Me Christopher R

DFT Model Supports Anion's Role

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

N

NMe2

Me

O

AcO

HO

tBu

ca. !H = +34.8 kJ/mol

N

NMe2

Me

O

ca. !H = +77.2 kJ/mol

HO

tBuO

O

Me

OH OAc

DMAP, RT

Ac2O

Xu, S.; Held, I.; Kempf, B.; Mayr, H.; Steglich, W.; Zipse, H. Chem. Eur. J. 2005, 11, 4751.

Page 27: Lies My Sophomore Organic Professor Told Me Christopher R

Kinetic Study of the Acetate's Role in the RDS

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

Kinetic Order

1

1

1

0

Reactant

Cyclohexanol

DMAP

Ac2O

triethylamine

OH OAc

DMAP, TEA

CH2Cl2, RT

The acetate counterion is the only

possible base involved in the RDS

based on this data.

Ac2O

HNEt3OAc+

Xu, S.; Held, I.; Kempf, B.; Mayr, H.; Steglich, W.; Zipse, H. Chem. Eur. J. 2005, 11, 4751.

Page 28: Lies My Sophomore Organic Professor Told Me Christopher R

Why is Acetate Able to Deprotonate an Alcohol?

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

N

NMe2

Me

O

AcO

H

O

R

Electrostatic Activation?

!"

The rate does have a known inverse

dependence on the solvent polarity1

1. Spivey, A.; Arseniyadis, S. ACIEE, 2004, 43, 5436

Page 29: Lies My Sophomore Organic Professor Told Me Christopher R

Why is Acetate Able to Deprotonate an Alcohol?

1. DMAP is more nucleophilic than the alcohol

2. The acylpyridinium anion is positioned to activate the incoming nucleophile via deprotonation in the rate determining step.

The activation mode is HOMO raising

of the nucleophile, not LUMO lowering

of the electrophile

N

NMe2

Me

O

AcO

H

O

R

Electrostatic Activation?

!"

The rate does have a known inverse

dependence on the solvent polarity1

1. Spivey, A.; Arseniyadis, S. ACIEE, 2004, 43, 5436

Page 30: Lies My Sophomore Organic Professor Told Me Christopher R

Relevant Examples

N

Me2N

FePhPh

Ph

Ph

PhOH

Me

Ph

Ac2O

t-amyl alcohol, 0 ºC

OH

Me

Ph

+

Fu's Chiral DMAP

Yamaguchi Macrolactonization

HO

O

Me

O

Me

O

Me

OR

Me Me

Me

OHOH

Me Me

O

O

Me

O

O

Me

Me

Me

OR

Me

OHMe

MeMe

Cl

Cl

Cl

Cl

O

then DMAPbenzene, RT

42% yield96% ee, s = 20

94% yield

Fu, G. et al. J. Am. Chem. Soc. 1999, 121, 5091

Panek, N. et al. J. Am. Chem. Soc. 2002, 124, 12806

Page 31: Lies My Sophomore Organic Professor Told Me Christopher R

Relevant Examples

N

Me2N

FePhPh

Ph

Ph

PhOH

Me

Ph

Ac2O

t-amyl alcohol, 0 ºC

OH

Me

Ph

+

Fu's Chiral DMAP

Yamaguchi Macrolactonization

HO

O

Me

O

Me

O

Me

OR

Me Me

Me

OHOH

Me Me

O

O

Me

O

O

Me

Me

Me

OR

Me

OHMe

MeMe

Cl

Cl

Cl

Cl

O

then DMAPbenzene, RT

42% yield96% ee, s = 20

94% yield

Fu, G. et al. J. Am. Chem. Soc. 1999, 121, 5091

Panek, N. et al. J. Am. Chem. Soc. 2002, 124, 12806

Page 32: Lies My Sophomore Organic Professor Told Me Christopher R

The Mechanism of Addition of Grignard Reagents to Carbonyls

Recommended Reading: Ashby, E.; Bowers, J. J. Am. Chem. Soc., 1981, 103, 2242

Ether, RT

tBuMgBrO OHtBu

Page 33: Lies My Sophomore Organic Professor Told Me Christopher R

The Traditionally Taught Mechanism

"Because they resemble carbanions, Grignard and organolithium reagents are strong nucleophiles and strong bases. Their most useful nucleophilic reactions are additions to carbonyl groups."

- Wade, L. G. Organic Chemistry. Prentice Hall, 2003.

R' MgX C O

R

R

etherR' C O

R

R

MgX

!" !+

+

Page 34: Lies My Sophomore Organic Professor Told Me Christopher R

An Incompatible Observation

Me

Me

MeMgCl +

O

OH

Me

Me

MeH

Ph

Ph

OH

Ph

HO

Ph+ +THF

Blomberg, R. M. et al. J. Org. Chem. 1969, 34, 2385.

This is highly suggestive of radical intermediates

Me MeMe

80% 20% each

Page 35: Lies My Sophomore Organic Professor Told Me Christopher R

An Incompatible Observation

Me

Me

MeMgCl +

O

OH

Me

Me

MeH

Ph

Ph

OH

Ph

HO

Ph+ +THF

Blomberg, R. M. et al. J. Org. Chem. 1969, 34, 2385.

This is highly suggestive of radical intermediates

Me MeMe

80% 20% each

Page 36: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

"Path A" rate constant is estimated

to be 107-109 L mol-1 s-1 for a

primary alkyl radical.

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Page 37: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

"Path A" rate constant is estimated

to be 107-109 L mol-1 s-1 for a

primary alkyl radical.

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Page 38: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

"Path A" rate constant is estimated

to be 107-109 L mol-1 s-1 for a

primary alkyl radical.

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Page 39: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

"Path A" rate constant is estimated

to be 107-109 L mol-1 s-1 for a

primary alkyl radical.

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Page 40: Lies My Sophomore Organic Professor Told Me Christopher R

UV Evidence for the !"Complex

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

2. Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

1. Both bands rapidly disappear when the

Grignard solution is warmed to 25ºC.

2. Carbonyl band shifts in IR have also been recorded

O

Me

Me

OMe

Ketone

1. Smith, S. Tet. Lett. 1963, 103, 409

Page 41: Lies My Sophomore Organic Professor Told Me Christopher R

EPR Evidence for the Ketyl Radical

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

R= Me, Et, Ph, allyl.

Maruyama, K.; Katagiri, T. J. Phys. Org. Chem. 1989, 2, 205

O

O

1equiv RMgBr"purple colored radical"

stable for years at RT

EPR spectrum of the "purple colored radical"

from PhMgBr and Benzil in THF

Page 42: Lies My Sophomore Organic Professor Told Me Christopher R

EPR Evidence for the Ketyl Radical

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

R= Me, Et, Ph, allyl.

Maruyama, K.; Katagiri, T. J. Phys. Org. Chem. 1989, 2, 205

O

O

1equiv RMgBr"purple colored radical"

stable for years at RT

Radical cation is not observed directly

because it exists as a diamagnetic dimer

Page 43: Lies My Sophomore Organic Professor Told Me Christopher R

Radical Probes as Evidence of Electron Transfer

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

MgCl

OO

MgX

PhPh

OMgX

OMgX

+

Rearranged products are proof of a radicalintermediate, but thecontrapositive is notnecessarily true.

5-hexenyl radical cyclization = 105 s-1

alkyl radical + ketyl radical = 107-109 L mol-1 s-1.

Rate Constants for Competing Reactions

Page 44: Lies My Sophomore Organic Professor Told Me Christopher R

Radical Probes as Evidence of Electron Transfer

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

MgCl

OO

MgX

PhPh

OMgX

OMgX

+

Rearranged products are proof of a radicalintermediate, but thecontrapositive is notnecessarily true.

5-hexenyl radical cyclization = 105 s-1

alkyl radical + ketyl radical = 107-109 L mol-1 s-1.

Rate Constants for Competing Reactions

Page 45: Lies My Sophomore Organic Professor Told Me Christopher R

Slowing Down "Path A"

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

"Path A" rate constant is estimated

to be 107-109 L mol-1 s-1 for a

primary alkyl radical.

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Page 46: Lies My Sophomore Organic Professor Told Me Christopher R

Radical Probes as Evidence of Electron Transfer

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

MgCl

O OHR

+MeMe

O

R

+

58% yield 42% yield

[41% cyclized] [81% cyclized]

THF

MgCl

O OHR

+

O

R

+

100% yield 0% yield

[12% cyclized]

THF

MeMe

Page 47: Lies My Sophomore Organic Professor Told Me Christopher R

Radical Probes as Evidence of Electron Transfer

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

MgCl

O OHR

+MeMe

O

R

+

58% yield 42% yield

[41% cyclized] [81% cyclized]

THF

MgCl

O OHR

+

O

R

+

100% yield 0% yield

[12% cyclized]

THF

MeMe

Page 48: Lies My Sophomore Organic Professor Told Me Christopher R

Can We Know if This Mechanism is General for All Grignards?

Ashby, E.; Bowers, J. J. Am. Chem Soc. 1981, 103, 2242.

"Path A" rate constant is estimated

to be 107-109 L mol-1 s-1 for a

primary alkyl radical.

The reaction is initiated

by electron transfer, and

radical recombination

forms the new bond.

Page 49: Lies My Sophomore Organic Professor Told Me Christopher R

Relevant Example

unpublished observation by the speaker

Synthesis of 3º Alcohol En Route to Togni Reagent

MeMgBr

Et2O

I

MeO

O

I

HO

MeMe1M = 0%IY, decomp.

0.2M = >95% IY

I

MeO

O

Page 50: Lies My Sophomore Organic Professor Told Me Christopher R

The Mechanism of E-selective Enolization of Acyclic Carbonyls by LDA

Recommended Reading: Collum, D.; Romesberg, F. J. Am. Chem. Soc. 1995, 117, 2166

2. TMSCl

1. LDA, THF

MeMe

O

Me

Me

OTMS

Page 51: Lies My Sophomore Organic Professor Told Me Christopher R

The Traditionally Taught Mechanism

"...the preferential formation of the E-enolate can be explainedin terms of a cyclic transition state... Steric interaction between the base and the !-substituent disfavors the TS for the Z-enolate... The switch to the Z-enolate with HMPA is attributedto a looser, perhaps acyclic, TS being favored as the result ofthe strong solvation of the lithium ion by the cosolvent."

-Carey, F.; Sundberg, R. Advanced Organic Chemistry. Springer Science+Business Media, 2007.

1. The E-selective TS is a monomeric cycle with minimzed 1,3-diaxial strain favored by weakly coordinating solvents

Figure: Evans's 206 Notes, Lecture 22

2. The Z-selective TS is open monomer with minimized allylic strain favored by strongly coordinating solvents that "break-up" the lithium chelate.

Page 52: Lies My Sophomore Organic Professor Told Me Christopher R

Incompatible Observations

Collum, D.; et al. J. Am. Chem. Soc. 1991, 113, 5053.

LDA, LiClMeMe

O

Me

Me

OTMS

Rate of equilibration from E to Z is not significant

Page 53: Lies My Sophomore Organic Professor Told Me Christopher R

Incompatible Observations

Collum, D.; et al. J. Am. Chem. Soc. 1991, 113, 5053.

LDA, LiClMeMe

O

Me

Me

OTMS

N

LiClH

Li

NLi

Li

Cl

Li

NiPr

iPr

iPriPriPr iPr

0.4eq

1.5eq

Predominant Species

6Li, 15N NMR

Equivalents

of LiCl

Page 54: Lies My Sophomore Organic Professor Told Me Christopher R

A Major Oversight?

H

N

Li

O

RH

iPr

iPr

OR'

O

M

O

R''

H

R

H

R'

Zimmerman-Traxler Model

(1957)

Ireland Model

(1976)

vs.

Page 55: Lies My Sophomore Organic Professor Told Me Christopher R

A Major Oversight?

H

N

Li

ORH

iPr

iPr

OR'

O

MO

R''

H

R

H

R'

Zimmerman-Traxler Model

(1957)

Ireland Model

(1976)

vs.

"Although Ireland's model has an enormous aesthetic appeal in being a chair..., it fails to satisfy the stereoelectronic requirements of enolization (notice that the base does not approach along the axis of the correctly aligned ! C-H bond being broken)..." Narula, A. Tet. Lett. 1981, 22, 4119.

"#

Page 56: Lies My Sophomore Organic Professor Told Me Christopher R

A Major Oversight?

HN

Li

ORH

iPr

iPr

OR'

O

MO

R''

H

R

H

R'

Zimmerman-Traxler Model

(1957)

Ireland Model

(1976)

vs.

"Although Narula challenged the chair transition state model and received

some support from ab initio calculations1, the chair model maintains wide

popularity." Collum, D.; Romesberg, F. J. Am. Chem. Soc. 1995, 117, 2166.

1. Personal correspondance between Houk and Collum.

H

!"

Page 57: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

Collum, D.; Romesberg, F. J. Am. Chem. Soc. 1995, 117, 2166.

84º-95º

O

Li

NLi

N

H

Et

Me

iPriPr

iPr iPr

O

Li

NLiN

H

Et

Me

iPriPr

iPr iPr

LDA, THF

MeMe

O

Me

Me

OLi

Reacts via the "open dimer" in a cyclic TS

Page 58: Lies My Sophomore Organic Professor Told Me Christopher R

An Alternative Mechanism

Collum, D.; Romesberg, F. J. Am. Chem. Soc. 1995, 117, 2166.

84º-95º

O

Li

NLi

N

H

Et

Me

iPriPr

iPr iPr

O

Li

NLiN

H

Et

Me

iPriPr

iPr iPr

LDA, THF

MeMe

O

Me

Me

OLi

Reacts via the "open dimer" in a cyclic TS

Page 59: Lies My Sophomore Organic Professor Told Me Christopher R

Calculated Enthalpies Support the Dimer Transition State

Collum, D.; Romesberg, F. J. Am. Chem. Soc. 1995, 117, 2166.

O

Li

NLiN

H

Et

Me

iPriPr

iPr iPr

LDA, THF

MeMe

O

Me

Me

OLi

N

H

O

Li

Me

Et

iPr

iPr

Dimer Monomer

The calculated enthalpies favor the E-product TS in all solvents evaluated

Page 60: Lies My Sophomore Organic Professor Told Me Christopher R

Relevant Example

MeMe

O

Me

Me

OTMS

Temperature E : Z

5 : 1

20 : 1

50 : 1

-78 ºC

-20 ºC

-78 ºC

LiTMP

LiBr Additive

none

none

1 eq

THF

Is any of this truly surprising when thoughtabout in the context of aggregates?

Page 61: Lies My Sophomore Organic Professor Told Me Christopher R

Final Thought

does it matter if we keep teachingmechanisms that we know are wrong?

Given that no mechanism can be known with 100% certainty,