lung nodules - amazon s3 · 2016-09-13 · when broad-based budding is seen in pathology, what have...
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Infections without borders
Jeannette Guarner, MD
Department of Pathology and Laboratory Medicine
Emory University
Session number CS07
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Conflicts: none
Disclosures:
Paid by The Emory Clinic
Worked at CDC 1997-2007, now guest researcher
Brought up in Mexico, thus funny accent
Husband, at Emory University, Chair of Global Health
Images, own and from CDC:
http://phil.cdc.gov/phil/home.asp
http://dpd.cdc.gov/dpdx/HTML/Image_Library.htm
In the past 12 months, I have not had a significant financial interest or other
relationship with the manufacturer(s) of the product(s) or provider(s) of the
service(s) that will be discussed in my presentation.
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LUNG NODULES
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Case 1
45 year old woman
Severe persistent
cough and shortness of
breath, no fever
10-15 pack tobacco use
Worked up for a lung
mass
Radiology: right lung
cavitary lesion
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PPD negative
Bronchoscopy with biopsies negative for
neoplasia
Wedge resection
Operative report describes a large cavitary
lesion and purulent material
Material sent to pathology and microbiology
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QUESTION: What is your diagnosis?
1. Cryptococcus
2. Coccidioides
3. Blastomyces
4. Histoplasma
5. Yeasts not further specified
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When broad-based budding is seen in
pathology, what have cultures shown:
High percent of cultures are overgrown with
Candida.
Retrospective study, 53 patients:
Blastomyces recovered in 67%
Coccidioides immitis, Candida albicans or Aspergillus
from 4 (10%)
Thus, not all broad based-budding yeasts in the
8 to 15 micron size range are Blastomyces.
Lemos LB, et al. Ann Diagn Pathol. 2000;4:391-406.
Patel AJ, et al Am J Surg Pathol. 2010;34:256-261.
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Review of more slides:
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Description: Spherules with
multiple endospores (10 to
100µ in size).
Diagnosis: Spherules with
multiple endospores.
Comment: The morphology
is consistent with
Coccidioides spp.
Differential diagnosis:
Rhinosporidium seeberi
which has sporangia with
endospores but is much
larger.
Description: Yeast ranging
in size from 10 to 20µ with
broad-based budding.
Diagnosis: Broad-based
budding yeasts
Comment: The morphology
is consistent with
Blastomyces but other yeast
can present with this
morphology including
Histoplasma, Candida,
Pneumocystis, Coccidiodes
and others.
Guarner J, Brandt ME. Histopathologic diagnosis of fungal
infections in the 21st century. Clin Micro Rev 2011; 24:247-80
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QUESTION: Which is the usual epidemiologic
setting of coccidioidomycosis?
1. Having lived in Mississippi
2. Being a migrant from Vietnam
3. Building a house in the outskirts of the
Sonoran Desert
4. Going camping during the summer in the
Colorado Rockies
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Epidemiology: Blastomycosis
Blastomyces is isolated
from soil with high content
of organic compounds.
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Blastomycosis
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Epidemiology: Coccidioidomycosis
TN Kirkland, J Fierer. Coccidioidomycosis: A Reemerging
Infectious Disease. Emerg Infect Dis. 1996:2:192-199
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Infectious diseases elicited
history in our patient
In 2005, had a pneumonia
on the right side, for which
she was treated with an
unknown intravenous
antibiotic and azithromycin.
Patient moved to GA in
2009.
Born in Los Angeles and lived there until 2000.
Moved to Chihuahua.
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Immunoassay in urine for blastomycosis.
Bd, B. dermatitidis;
Hc, H. capsulatum;
Pb, P. brasiliensis;
Pm, P. marneffei;
Ci, C. immitis;
Af, A. fumigatus;
Ca, C. albicans;
NI, controles.
Durkin M et al. J Clin
Microbiol 2004;
42:4873
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Coccidioidomycosis: Alternative
diagnostic methods
IgM and IgG measured using EIA and/or
immunodiffusion False negative serology in up to 38% of patients with
hematogenous infection and 46% of fatal cases
Urine antigens using EIA present in 71% of
patients Cross-reaction in 10% of patients with other endemic
mycosis
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Mycology laboratory
Grows easily in the laboratory
(93% sensitivity)
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Size
Grouping
EpidemiologyYeasts
Small
(2 -10 µ)
Histoplasma
Cryptococcus
Candida glabrata
Pneuumocystis
Talaromyces
Sporothrix
Large
(>10 µ)
Blastomyces
Coccidioides
Paracoccidioides
Chrysosporium
Parasites:
Toxoplasma,
Leishmania,
Trypanosome
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Small yeasts
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Large yeasts
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Case 2
A 35 years old a farm
worker originally from
Central America
presented with fever
and was found to
have a lung nodule in
a Chest X ray. A PPD
was placed.
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His first sputum AFB smears shows:
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QUESTION: How many AFB organisms need to be
present in 1 µL of sputum so as to have a positive
smear?
1. 100
2. 1,000
3. 10,000
4. 100,000
Siddiqi K et al. Clinical diagnosis of
smear-negative pulmonary tuberculosis in
low-income countries: the current
evidence. Lancet Infect Dise 2003;3:288
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QUESTION: The sputum culture exposed to light
grew the following colonies within 1 week, how
would you classify this mycobacteria?
1. Rapid grower
2. A photochromogen
3. A scotochromogen
4. Not in the Runyon classification
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Runyon classification
Not in the classification: M. tuberculosis, M. bovis
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Molecular methods
Xpert MTB/RIF at
the Black Lion
Hospital in Addis
Ababa, Ethiopia
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Histopathology
More frequently
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End of case
The patient took his treatment which included
isoniazid, ethambutol, rifampin, pyrazinamide,
and vitamin B6.
At 2 months he started treatment he started
feeling weak and having nausea. He went to a
physician and his liver function tests were
markedly elevated.
Even though isoniazid was discontinued the
patient went into liver failure and he has been
placed in the waiting list for a liver transplant.
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SKIN NODULES
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Case 3
41 year old male.
One month history of indurated, erythematous, paineless lesions that started in scalp and have spread.
Had visited friends in New Orleans for Mardi Gras.
Treated unsuccessfully with Bactrim.
As part of the work up an HIV test is ordered.
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Sequence of HIV test positivity
Days after infection
10 15 20 25 30
Western
Blot
Rapid tests
Rapid
differential
HIV-1 & HIV-2Third
generation
(IgG/IgM)
IA
Rapid
Ag/Ab
Fourth
generation
(Ag/Ab) IA
Nucleic acid
detection
Infection
0 35
Ag/Ab= antigen and antibody; IA= immunoassays
Masciotra et al, J Clin Virol 2011
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New algorithm
Western Blot
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Case continues
Negative viral, bacterial and fungal cultures
Negative special stains in the biopsy for AFB,
fungi and syphilis.
RPR reactive with a titer of 1:4 (patient had been
treated for syphilis one year before)
HIV positive with a CD4 cell count of 243
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QUESTION: How long does it take for the
RPR to become negative?
1. Two years
2. Five years
3. Never as it measures IgG
4. Depends on the stage
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Non treponemal tests
Positives in: 80-90% primary syphilis,
100% secondary syphilis,
~70% late syphilis
Converts to non reactive after: 1 year in primary syphilis,
2 years in secondary syphilis,
5 years in late syphilis
Chronic persisters: usually biological false reaction.
In HIV positive patients, >1:4 titter may indicate active persistent infection or reinfection.
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Treponemal tests
Usually positive for life as they detect IgG
against the spirochettes.
Do not detect recent infections, become positive
2-3 weeks after initial infection.
Include:
FTA-ABS: fluorescent label
TP-PA: agglutination
ELISA
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Usual sequence of serologic
syphilis diagnosis
RPR
Proceed to titer &
perform
confirmatory test
Confirmatory tests
include: TP-PA, FTA-
ABS or syphilis IgG
ELISA
+
-Diagnosis of syphilis,
present
+Diagnosis of
syphilis unlikely
-
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Reverse sequence of serologic
syphilis diagnosis
MMWR, February 11, 2011 / 60(05);133-137
IgG using
instrumentation
RPR
+
Diagnosis of
syphilis, proceed to
titer
Perform another
confirmatory test:
TP-PA or FTA-ABS
Patient does
not have
syphilis
-
+
-Diagnosis of syphilis,
past or present+
Diagnosis of
syphilis unlikely
-140,176
specimens
3.4%56.7%
31.6%
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Case continues
Other tests negative a
biopsy was obtained
IHC
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Primary and secondary syphilis rates
by state in 2010
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Case 2
34 yoga instructor and
avid gardener.
Noticed insect bites after
she went on a trip to
southern Italy.
Within 3 weeks, a non-
pruritic, raised and
erythematous lesion in the
lower leg gradually
enlarged and ulcerated.
She has no
lymphadenopathy.
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QUESTION:
What is your diagnosis?
A. Sporothrichosis
B. Sarcoidosis
C. Leishmaniasis
D. Hypersensitivity to insect bite
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QUESTION: Which is the vector
of Leishmania?
A. Phlebotomus
B. Triatoma
C. Simulium
D. Glossina
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Species
21 of 30 species infect humans.
L. donovani complex with 3 species; L.
mexicana complex with 3 main species; L.
tropica; and others.
Indistinguishable morphologically, but can be
differentiated by isoenzyme analysis, molecular
methods, or monoclonal antibodies.
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90 percent of the world's cases of visceral
leishmaniasis are in India, Bangladesh, Nepal,
Sudan, and Brazil.
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Clinical forms: Cutaneous
Skin lesions where sandflies fed.
One or more sores which can change in size and
appearance over time.
Painless or painful.
Some swollen
lymph nodes.
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Clinical forms: Visceral
(kala-azar)
Fever, weight loss, lymphadenopathy and
hepatosplenomegaly (spleen usually more
enlarged than the liver).
Abnormal CBC: anemia, neutropenia, and
thrombocytopenia.
Some patients develop post kala-azar dermal
leishmaniasis.
HIV opportunistic infection.
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Diagnosis: Microscopy
In tissue specimens,
only amastigotes are
seen using Giemsa or
H&E.
Differential diagnosis
Histoplasma (no
kinetoplast) and
Trypanosoma cruzi
(seen in muscle rather
than macrophages).
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QUESTION: What is a
kinetoplast?
A. Aggregate of ribosomes
B. DNA-containing granule
C. Lysosome with ingested RNA
D. Calcified mitochondrion
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kinetoplastundulating
membrane
flagellum
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Diagnosis
Isoenzyme analysis: after isolation using the
biphasic medium (solid blood agar base with
defribinated rabbit blood).
Serology: useful in visceral leishmaniasis but is
of limited value in cutaneous disease; cross
reactivity with Trypanosoma.
Molecular: potential to be more sensitive and
rapid. Amplify a segment of the rRNA internal
transcribed spacer 2 (ITS2) from multiple
Leishmania species.
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Treatment
Pentavalent antimonial
Liposomal amphotericin B
Miltefosin
Paromomycin
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In the 10th century,
Avicenna gave
detailed
descriptions of
cutaneous
leishmaniasis
(Balkh sore).
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Case
A 19 year old woman that camped with
friends in Costa Rica presents with a paiful
nodule in her back.
Some yellow white material is observed on
top of the nodule.
She has expressed the material and wants
you to look at it.
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Using a magnifying glass you see:
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QUESTION: What is your
diagnosis?
A. Tungasis
B. Myiasis
C. Pediculosis
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Geographic distribution
Mexico to South America: Dermatobia hominis
and Cochliomyia hominovorax.
Africa south of the Sahara: Auchmeromyia
luteola and Cordylobia anthropophaga.
Mediterranean basin, Near East, and Central
and Eastern Europe: Wohlfahrtia magnifica.
United States and Canada: W. vigil.
In the New World: Cuterebra species.
Where sheep are tended: Oestrus ovis
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Case
34 year old woman comes for a routine
physical exam and nodule in her right arm
is noted by her primary care provider.
She is a missionary that has spent several
months in rural Mexico.
She is referred to dermatology and a
biopsy is obtained.
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QUESTION: Which bacteria has been
found to be an endosymbiont with
filarial nematodes?
A. Deinococcus
B. Salinibacter
C. Bdellovibrio
D. Wolbachia
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Anterior and posterior ends of microfilariae found in
humans. A, Wuchereria bancrofti. B, Brugia malayi.
C, Loa loa. D, Onchocerca volvulus. E, Mansonella
perstans. F, Mansonella streptocerca. G, Mansonella
ozzardi.
Brugia malayi
Wuchereria bancrofti
Mansonella
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Diagnosis
Sample: venous blood
Periodicity
Loa loa—midday (10 AM to 2 PM)
Brugia or Wuchereria—at night, after 8 PM
Mansonella—any time
Onchocerca—any time
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Case
A 27 year old man presented with a
nodular lesion in the right thigh that
occurred after he sustained a cut while
snorkeling in the Caribbean.
There were no systemic symptoms such
as fever or malaise.
The nodule was resected.
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QUESTION: What is your
diagnosis?
A. Fungus
B. Protozoan
C. Algae
D. Parasite egg
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Prototheca
Only algae known to be a pathogen in humans.
Spherical, unicellular organisms 3 to 20 um in
diameter.
Reproduction is asexual – during cell maturation
the cytoplasm undergoes a process of cleavage
to form 2 to 20 endospores (morula).
The sporangia (mother cells) break under
pressure from the enlarging endospores; release
of spores is passive.
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LIVER NODULE
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Case 5
21 year old man from New Zealand.
Came to US to get a masters in epidemiology.
Presents with fevers, headache and abdominal
pain that have been going on for 3 days.
Temp 38.9°C; BP 105/54
Exam: tenderness to palpation in LUQ
Labs: WBC 14.1 (normal 4.2-9.1); platelets
104,000; ALT 200 (normal <45); AST 172
(normal 15-41); ALP (97 (normal 32-91)
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Differential diagnosis
Sepsis
Abdominal MRI demonstrated a 12x9x9
cm septated left liver lobe mass:
Echinococcosis
Amebiasis
Pyogenic liver abscess
Neoplasia
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QUESTION: Which of the following
is the definitive host of
echinococci?
A. Dog
B. Horse
C. Sheep
D. Cow
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Echinococcosis
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Echinococcosis
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Echinococcus: radiology
M Stojkovic et al: PLOS Neglected Tropical Diseases. 2012
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Echinococcus: cytology & histology
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Echinococcus: laboratory diagnosis
Antibody detection: False-positive
reactions may occur in persons with other
helminthic infections, cancer, and chronic
immune disorders. Negative results do not
rule out echinococcosis.
Methods: Indirect hemagglutination (IHA),
indirect fluorescent antibody (IFA) tests,
and enzyme immunoassays (EIA).
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Amebiasis
Entamoeba dispar
and E. histolytica are
morphologically
identical.
E. histolytica: wide
disease spectrum:
asymptomatic,
dysentery,
liver abscess
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Serology
Tests
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Back to our case
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Streptococcus anginosus
ArginineVP
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Streptococcus anginosus group
The group includes: S. constellatus, S.
anginosus and S intermedius. (previously called
milleri).
Produce acetoin from glucose (characteristic
buttery odor --Voges-Proskauer test), ferment
lactose, trehalose, salicin, and sucrose, and
hydrolyze esculin and arginine.
Produce pyogenic abscess.
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