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Magnetic Resonance Imaging – Basic Principles – EVELYNE BALTEAU [email protected] Cyclotron Research Centre

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Page 1: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Magnetic Resonance Imaging– Basic Principles –

EVELYNE BALTEAU

[email protected] Research Centre

Page 2: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Overview

• Brief history of MRI• Magnetic properties of the nuclei

• Interaction with B0

• Interaction with B1

• Relaxation• Signal Localization• Contrast

Page 3: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Brief history of MRI

index

1940 1950 1960 1970 1980 1990 2000

1946 – Bloch & Purcell independently describe the NMR phenomenon1952 – Bloch & Purcell Nobel Prize in Physics

NMR developed as analytical tool (no medical application)

1973 – Lauterbur : Back-projection MRImaging

1971 – Damadian : NMR used to distinguish healthy and malignant tissues medical application but imaging technique…

1975 – Ernst : Fourier Transform based MRI (demonstrated by Edelstein in 1980)

1977 – Mansfield : Echo-Planar Imaging

1991 – Ernst Nobel Prize in Chemistry

1990 – Ogawa : functional MRI (BOLD)

2003 – Lauterbur & Mansfield Nobel Prize in Medicine

Page 4: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

MRI : magnetic stuff !!

Magnetic properties of the NUCLEI

External magnetic field

B0 = 3 T

Electromagnetic field B1 (Radio-

frequency or RF)

index

60000 the earth’s magnetic field !!!!

FM radio-waves : 88.8 – 108.8 MHz !!

Page 5: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Magnetic properties of the nuclei

index

Nuclear MRI no radioactivity !! nucleus is like a small magnet

The nuclear SPIN characterized by a spin number I quantum mechanics !! a nucleus with I 0 behaves like a

small magnet

The Hydrogen nucleus the most abundant (~⅔ of the atoms in living tissues)

Page 6: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Behaviour of the nuclei interacting with :

1.The external magnetic field B0

Equilibrium state

2.The electromagnetic field B1 (RF)

Disturbance

index

Page 7: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Interaction with B0

index

1. Orientation :

Page 8: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Interaction with B0

2. Energy states :

index

E = ħBo = ħo

Page 9: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Interaction with B0

3. Precession :

index

Rotation or precession about the axis of the magnetic field Bo with frequency :

o = Bo

o = Larmor frequency = gyromagnetic ratio

Page 10: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Interaction with B0

3. Precession :

index

At the equilibrium state :

- rotation in phase

- no transverse magnetization Mxy

y

x

Page 11: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Interaction with B0

index

4. Summary : at the equilibrium state :

1. spin orientation « up » > « down »

longitudinal magnetization Mz

2. precession

no transverse magnetization Mxy

Page 12: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Interaction with B1

Resonance phenomenon

index

TRANSITIONS

Transitions E1 E2 Mz decreases

REPHASING

Phase coherence increases Mxy increases

!!! RF frequency = Larmor frequency = 0 !!!

Page 13: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Interaction with B1

index

Two different processes :

1. Transitions E1 E2 Mz decreases

2. Rephasing Mxy increases

The macroscopic magnetization flips from the z-axis to the xy-plane and precesses

From the macroscopic point of view…

Page 14: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Relaxation back to the equilibrium state…

index

DEPHASING

Dephasing Mxy decreases T2 relaxation

TRANSITIONS

Transitions E2 E1 Mz increases T1 relaxation

Page 15: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Relaxation back to the equilibrium state…

index

Two different processes :

1. Transitions E2 E1 Mz increases T1 relaxation

2. Dephasing Mxy decreases T2 (exponential)

relaxation

Free Induction Decay : received signal !! informations from the

tissues of interest

Page 16: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Signal localization

index

Up to now : the signal received contains information from the

entire body !!

Not interesting ! Use field gradients to spatially encode the signal

Three steps :1. Slice selection slice = matrix2. Frequency-encoding columns3. Phase-encoding lines

Page 17: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Signal localization

index

1. Slice selection gradient Resonance Phenomenon : RF = o !!!

Before Gz is applied : all the spins precess with the same Larmor frequency o all could resonate !!

During application of Gz : the spins precess with only spins with frequency = RF resonate

Page 18: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Signal localization

index

2. Frequency-encoding gradient

Slice selection : but still no spatial discrimination within the slice !

Before Gx is applied : all the spins precess with the same Larmor frequency o

During application of Gx : the spins precess with frequencies Fourier Transform of the signal allows discrimination between columns !

Page 19: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Signal localization

index

3. Phase-encoding gradient

Before Gy is applied : all the spins precess with the same Larmor frequency o

During application of Gy : the spins precess with frequencies induces phase difference between the linesAfter application of Gx : all the spins precess again at the same Larmor frequency, but with different phase shifts from line to line…

Page 20: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

Grey-level images :

the intensity of a voxel depends on the intensity of the corresponding signal.

Page 21: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

T1 (ms) T2 (ms) proton density

WM 500 75 0.65

GM 750 90 0.8

CSF 3000 200 1.0

Page 22: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

Contrast depends on :

1. tissue properties : T1, T2, user-independent

2. sequence parameters : TR, TE, …TR = repetition time = time interval between two RF pulsesTE = echo time = when the acquisition is performed user-dependent

Page 23: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

Sequence parameters : TR and TE

Page 24: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

T2-weighted image : long TR – long TE

Page 25: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

T2-weighted image : long TR – long TE

CSF

GM

WM

TR = 3370 msTE = 112 ms

Page 26: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

T1-weighted image : short TR – short TE

Page 27: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

T1-weighted image : short TR – short TE

WM

GM

CSF

TR ~ 500 msTE ~ 10 ms

Page 28: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

Illustration : une pomme dans un verre d’eau…Contraste en T1 – TE court et TR variableCas d’une impulsion RF initiale de 90°

Page 29: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

Illustration : une pomme dans un verre d’eau…Contraste en T1 – TE court et TR variableCas d’une impulsion RF initiale de 180°

Page 30: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

Contrast in MRI

index

Illustration : une pomme dans un verre d’eau…Contraste en T2 – TR long et TE variable

(Impulsion RF initiale de 90°)

Page 31: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

The 3.0 Tesla Allegra MR scanner at the Cyclotron Research Centre

Page 32: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

The 3.0 Tesla Allegra MR scanner at the Cyclotron Research Centre

Page 33: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

The 3.0 Tesla Allegra MR scanner at the Cyclotron Research Centre

Page 34: M agnetic R esonance I maging – Basic Principles – E VELYNE B ALTEAU e.balteau@ulg.ac.be Cyclotron Research Centre

index